RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 GDF6Q6KF10 455 aaPredicted RBP18.03■□□□□ 0.48
RTN3-211ENST00000542238 ADGRF4Q8IZF3 695 aa18.03■□□□□ 0.48
RTN3-211ENST00000542238 SYTL5Q8TDW5 730 aaPredicted RBP18.03■□□□□ 0.48
RTN3-211ENST00000542238 TBC1D5Q92609 795 aa18.03■□□□□ 0.48
RTN3-211ENST00000542238 NECAB3Q96P71 396 aaPredicted RBP18.03■□□□□ 0.48
RTN3-211ENST00000542238 TAAR1Q96RJ0 339 aa18.03■□□□□ 0.48
RTN3-211ENST00000542238 ZBED2Q9BTP6 218 aa18.03■□□□□ 0.48
RTN3-211ENST00000542238 C1QTNF1Q9BXJ1 281 aa18.03■□□□□ 0.48
RTN3-211ENST00000542238 MRPL11Q9Y3B7 192 aaKnown RBP18.03■□□□□ 0.48
RTN3-211ENST00000542238 PTPRSQ13332 1948 aa18.02■□□□□ 0.48
RTN3-211ENST00000542238 KDM4AO75164 1064 aa18.02■□□□□ 0.48
RTN3-211ENST00000542238 ARHGAP1Q07960 439 aa18.02■□□□□ 0.48
RTN3-211ENST00000542238 ASPRV1Q53RT3 343 aa18.02■□□□□ 0.48
RTN3-211ENST00000542238 ARHGEF16Q5VV41 709 aa18.02■□□□□ 0.48
RTN3-211ENST00000542238 LRRC8DQ7L1W4 858 aa18.02■□□□□ 0.48
RTN3-211ENST00000542238 C7orf31Q8N865 590 aa18.02■□□□□ 0.48
RTN3-211ENST00000542238 CRBNQ96SW2 442 aa18.02■□□□□ 0.48
RTN3-211ENST00000542238 LNPKQ9C0E8 428 aa18.02■□□□□ 0.48
RTN3-211ENST00000542238 EIF3JO75822 258 aaKnown RBP18.01■□□□□ 0.47
RTN3-211ENST00000542238 SDSP20132 328 aa18.01■□□□□ 0.47
RTN3-211ENST00000542238 WDR5P61964 334 aaKnown RBP18.01■□□□□ 0.47
RTN3-211ENST00000542238 KRT40Q6A162 431 aa18.01■□□□□ 0.47
RTN3-211ENST00000542238 FBXO11Q86XK2 927 aa18.01■□□□□ 0.47
RTN3-211ENST00000542238 HLA-CQ95604 372 aa18.01■□□□□ 0.47
RTN3-211ENST00000542238 ZSCAN10Q96SZ4 725 aaPredicted RBP18.01■□□□□ 0.47
RTN3-211ENST00000542238 KATNAL1Q9BW62 490 aa18.01■□□□□ 0.47
RTN3-211ENST00000542238 ARHGEF15O94989 841 aa18■□□□□ 0.47
RTN3-211ENST00000542238 PARP1P09874 1014 aaKnown RBP18■□□□□ 0.47
RTN3-211ENST00000542238 EIF2AK2P19525 551 aaKnown RBP18■□□□□ 0.47
RTN3-211ENST00000542238 GRB10Q13322 594 aa18■□□□□ 0.47
RTN3-211ENST00000542238 QRICH1Q2TAL8 776 aa18■□□□□ 0.47
RTN3-211ENST00000542238 CNKSR3Q6P9H4 555 aa18■□□□□ 0.47
RTN3-211ENST00000542238 ANKS1AQ92625 1134 aa18■□□□□ 0.47
RTN3-211ENST00000542238 KAT2BQ92831 832 aa18■□□□□ 0.47
RTN3-211ENST00000542238 EMID1Q96A84 441 aaPredicted RBP18■□□□□ 0.47
RTN3-211ENST00000542238 CTAGE1Q96RT6 745 aa18■□□□□ 0.47
RTN3-211ENST00000542238 ALG1Q9BT22 464 aa18■□□□□ 0.47
RTN3-211ENST00000542238 VAT1LQ9HCJ6 419 aa18■□□□□ 0.47
RTN3-211ENST00000542238 COL20A1Q9P218 1284 aa18■□□□□ 0.47
RTN3-211ENST00000542238 HDAC6Q9UBN7 1215 aa18■□□□□ 0.47
RTN3-211ENST00000542238 GTF2IRD1Q9UHL9 959 aa18■□□□□ 0.47
RTN3-211ENST00000542238 RAPGEFL1Q9UHV5 662 aa18■□□□□ 0.47
RTN3-211ENST00000542238 DDX41Q9UJV9 622 aaKnown RBP18■□□□□ 0.47
RTN3-211ENST00000542238 MRVI1Q9Y6F6 885 aa18■□□□□ 0.47
RTN3-211ENST00000542238 COL4A4P53420 1690 aaPredicted RBP17.99■□□□□ 0.47
RTN3-211ENST00000542238 EFCAB14O75071 495 aa17.99■□□□□ 0.47
RTN3-211ENST00000542238 CFBP00751 764 aa17.99■□□□□ 0.47
RTN3-211ENST00000542238 CKBP12277 381 aa17.99■□□□□ 0.47
RTN3-211ENST00000542238 PSEN2P49810 448 aa17.99■□□□□ 0.47
RTN3-211ENST00000542238 RBL2Q08999 1139 aa17.99■□□□□ 0.47
RTN3-211ENST00000542238 LAMC2Q13753 1193 aa17.99■□□□□ 0.47
RTN3-211ENST00000542238 DIAPH3Q9NSV4 1193 aa17.99■□□□□ 0.47
RTN3-211ENST00000542238 ABHD14A-ACY1A0A1B0GW23 586 aa17.98■□□□□ 0.47
RTN3-211ENST00000542238 B4E1Z4 1266 aa17.98■□□□□ 0.47
RTN3-211ENST00000542238 CXCL10P02778 98 aa17.98■□□□□ 0.47
RTN3-211ENST00000542238 NR3C2P08235 984 aa17.98■□□□□ 0.47
RTN3-211ENST00000542238 IKBKEQ14164 716 aa17.98■□□□□ 0.47
RTN3-211ENST00000542238 MFSD10Q14728 455 aa17.98■□□□□ 0.47
RTN3-211ENST00000542238 IMMTQ16891 758 aaKnown RBP17.98■□□□□ 0.47
RTN3-211ENST00000542238 CWC27Q6UX04 472 aaKnown RBP17.98■□□□□ 0.47
RTN3-211ENST00000542238 DHX37Q8IY37 1157 aaKnown RBP17.98■□□□□ 0.47
RTN3-211ENST00000542238 ENAHQ8N8S7 591 aaPredicted RBP17.98■□□□□ 0.47
RTN3-211ENST00000542238 PPTC7Q8NI37 304 aa17.98■□□□□ 0.47
RTN3-211ENST00000542238 DHX38Q92620 1227 aaKnown RBP17.98■□□□□ 0.47
RTN3-211ENST00000542238 RAD9AQ99638 391 aa17.98■□□□□ 0.47
RTN3-211ENST00000542238 AMNQ9BXJ7 453 aa17.98■□□□□ 0.47
RTN3-211ENST00000542238 KRT23Q9C075 422 aa17.98■□□□□ 0.47
RTN3-211ENST00000542238 JMJD4Q9H9V9 463 aa17.98■□□□□ 0.47
RTN3-211ENST00000542238 PXMP2Q9NR77 195 aa17.98■□□□□ 0.47
RTN3-211ENST00000542238 LMCD1Q9NZU5 365 aa17.98■□□□□ 0.47
RTN3-211ENST00000542238 ZSWIM5Q9P217 1185 aa17.98■□□□□ 0.47
RTN3-211ENST00000542238 XIRP2A4UGR9 3374 aa17.98■□□□□ 0.47
RTN3-211ENST00000542238 LCHNA4D1U4 455 aa17.97■□□□□ 0.47
RTN3-211ENST00000542238 HIP1O00291 1037 aa17.97■□□□□ 0.47
RTN3-211ENST00000542238 NBNO60934 754 aa17.97■□□□□ 0.47
RTN3-211ENST00000542238 DEFB103AP81534 67 aa17.97■□□□□ 0.47
RTN3-211ENST00000542238 PTK7Q13308 1070 aa17.97■□□□□ 0.47
RTN3-211ENST00000542238 GPNMBQ14956 572 aa17.97■□□□□ 0.47
RTN3-211ENST00000542238 KIAA0753Q2KHM9 967 aa17.97■□□□□ 0.47
RTN3-211ENST00000542238 B4GALNT3Q6L9W6 998 aa17.97■□□□□ 0.47
RTN3-211ENST00000542238 KCNV1Q6PIU1 500 aa17.97■□□□□ 0.47
RTN3-211ENST00000542238 TMCO2Q7Z6W1 182 aaPredicted RBP17.97■□□□□ 0.47
RTN3-211ENST00000542238 UBAC1Q9BSL1 405 aa17.97■□□□□ 0.47
RTN3-211ENST00000542238 RWDD1Q9H446 243 aaPredicted RBP17.97■□□□□ 0.47
RTN3-211ENST00000542238 CTNNA3Q9UI47 895 aa17.97■□□□□ 0.47
RTN3-211ENST00000542238 LPXNO60711 386 aa17.96■□□□□ 0.47
RTN3-211ENST00000542238 GJB5O95377 273 aa17.96■□□□□ 0.47
RTN3-211ENST00000542238 F2P00734 622 aa17.96■□□□□ 0.47
RTN3-211ENST00000542238 ZNF286BP0CG31 522 aa17.96■□□□□ 0.47
RTN3-211ENST00000542238 AAMPQ13685 434 aa17.96■□□□□ 0.47
RTN3-211ENST00000542238 FAM122AQ96E09 287 aa17.96■□□□□ 0.47
RTN3-211ENST00000542238 CNNM2Q9H8M5 875 aa17.96■□□□□ 0.47
RTN3-211ENST00000542238 MAP3K20Q9NYL2 800 aaKnown RBP17.96■□□□□ 0.47
RTN3-211ENST00000542238 SIP14410 1827 aa17.95■□□□□ 0.46
RTN3-211ENST00000542238 BRWD1Q9NSI6 2320 aa17.95■□□□□ 0.46
RTN3-211ENST00000542238 HAS3O00219 553 aa17.95■□□□□ 0.46
RTN3-211ENST00000542238 PPFIA4O75335 1185 aa17.95■□□□□ 0.46
RTN3-211ENST00000542238 MYCLP12524 364 aaPredicted RBP17.95■□□□□ 0.46
RTN3-211ENST00000542238 PLA2G5P39877 138 aa17.95■□□□□ 0.46
RTN3-211ENST00000542238 HSD17B4P51659 736 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms