RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 POTEGQ6S5H5 508 aa17.73■□□□□ 0.43
VARS2-212ENST00000542001 POTEEQ6S8J3 1075 aa17.73■□□□□ 0.43
VARS2-212ENST00000542001 ARHGEF10LQ9HCE6 1279 aa17.73■□□□□ 0.43
VARS2-212ENST00000542001 CCDC151A5D8V7 595 aa17.73■□□□□ 0.43
VARS2-212ENST00000542001 ATP1A1P05023 1023 aaKnown RBP17.73■□□□□ 0.43
VARS2-212ENST00000542001 PPP1R7Q15435 360 aa17.73■□□□□ 0.43
VARS2-212ENST00000542001 GSTA5Q7RTV2 222 aa17.73■□□□□ 0.43
VARS2-212ENST00000542001 QTRT2Q9H974 415 aaKnown RBP17.73■□□□□ 0.43
VARS2-212ENST00000542001 EMILIN3Q9NT22 766 aa17.73■□□□□ 0.43
VARS2-212ENST00000542001 GINS2Q9Y248 185 aa17.73■□□□□ 0.43
VARS2-212ENST00000542001 A0A087X0B3 334 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 GYPCP04921 128 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 PLA2G4BP0C869 781 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 PPP1R2P41236 205 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 VSNL1P62760 191 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 GNGT1P63211 74 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 EXOC3L4Q17RC7 722 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 ODR4Q5SWX8 454 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 IFT20Q8IY31 132 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 SEPT12Q8IYM1 358 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 PCDHA6Q9UN73 950 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 PCDHA8Q9Y5H6 950 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 LGALS16A8MUM7 142 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 MMP10P09238 476 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 LMBR1Q8WVP7 490 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 AP1M1Q9BXS5 423 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 RICTORQ6R327 1708 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 LRRC53A6NM62 1247 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 CALUO43852 315 aaPredicted RBP17.72■□□□□ 0.43
VARS2-212ENST00000542001 BUB1BO60566 1050 aaPredicted RBP17.72■□□□□ 0.43
VARS2-212ENST00000542001 RNF40O75150 1001 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 GFPT2O94808 682 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 STAT1P42224 750 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 DPYDQ12882 1025 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 MAN2A1Q16706 1144 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 ARL6IP4Q66PJ3 421 aaKnown RBP17.72■□□□□ 0.43
VARS2-212ENST00000542001 NFRKBQ6P4R8 1299 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 ANKRD7Q92527 254 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 ADAM21Q9UKJ8 722 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 GH2P01242 217 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 CETN2P41208 172 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 NR1I3Q14994 352 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 BCAS4Q8TDM0 211 aa17.72■□□□□ 0.43
VARS2-212ENST00000542001 KRIT1O00522 736 aa17.71■□□□□ 0.43
VARS2-212ENST00000542001 FLOT1O75955 427 aa17.71■□□□□ 0.43
VARS2-212ENST00000542001 CCDC172P0C7W6 258 aa17.71■□□□□ 0.43
VARS2-212ENST00000542001 DLATP10515 647 aaKnown RBP17.71■□□□□ 0.43
VARS2-212ENST00000542001 KCTD19Q17RG1 926 aaPredicted RBP17.71■□□□□ 0.43
VARS2-212ENST00000542001 KRT71Q3SY84 523 aa17.71■□□□□ 0.43
VARS2-212ENST00000542001 PPM1KQ8N3J5 372 aa17.71■□□□□ 0.43
VARS2-212ENST00000542001 NOA1Q8NC60 698 aaKnown RBP17.71■□□□□ 0.43
VARS2-212ENST00000542001 BARHL2Q9NY43 387 aa17.71■□□□□ 0.43
VARS2-212ENST00000542001 CCT5P48643 541 aa17.71■□□□□ 0.43
VARS2-212ENST00000542001 CEP57Q86XR8 500 aa17.71■□□□□ 0.43
VARS2-212ENST00000542001 REXO1L1PQ8IX06 675 aa17.71■□□□□ 0.43
VARS2-212ENST00000542001 JDP2Q8WYK2 163 aa17.71■□□□□ 0.43
VARS2-212ENST00000542001 AMNQ9BXJ7 453 aa17.71■□□□□ 0.43
VARS2-212ENST00000542001 TAOK3Q9H2K8 898 aa17.71■□□□□ 0.43
VARS2-212ENST00000542001 RASSF4Q9H2L5 321 aa17.71■□□□□ 0.43
VARS2-212ENST00000542001 HPSEQ9Y251 543 aa17.71■□□□□ 0.43
VARS2-212ENST00000542001 PCDHA13Q9Y5I0 950 aa17.71■□□□□ 0.43
VARS2-212ENST00000542001 DUSP10Q9Y6W6 482 aa17.71■□□□□ 0.43
VARS2-212ENST00000542001 DLG5Q8TDM6 1919 aa17.71■□□□□ 0.43
VARS2-212ENST00000542001 A0A1B0GTH6 734 aa17.71■□□□□ 0.43
VARS2-212ENST00000542001 TCRBV5S4A2TA0A5A2 114 aa17.71■□□□□ 0.43
VARS2-212ENST00000542001 CDC37Q16543 378 aaPredicted RBP17.71■□□□□ 0.43
VARS2-212ENST00000542001 GALNT17Q6IS24 598 aa17.71■□□□□ 0.43
VARS2-212ENST00000542001 SLC30A10Q6XR72 485 aa17.71■□□□□ 0.43
VARS2-212ENST00000542001 CNTNAP5Q8WYK1 1306 aa17.7■□□□□ 0.42
VARS2-212ENST00000542001 ZSCAN20P17040 1043 aaPredicted RBP17.7■□□□□ 0.42
VARS2-212ENST00000542001 FGFR2P21802 821 aa17.7■□□□□ 0.42
VARS2-212ENST00000542001 MGARPQ8TDB4 240 aa17.7■□□□□ 0.42
VARS2-212ENST00000542001 RIOK1Q9BRS2 568 aaKnown RBP17.7■□□□□ 0.42
VARS2-212ENST00000542001 TUBBP07437 444 aa17.7■□□□□ 0.42
VARS2-212ENST00000542001 BMP6P22004 513 aa17.7■□□□□ 0.42
VARS2-212ENST00000542001 LIG3P49916 1009 aa17.7■□□□□ 0.42
VARS2-212ENST00000542001 ADCY1Q08828 1119 aa17.7■□□□□ 0.42
VARS2-212ENST00000542001 PPP4R3AQ6IN85 833 aa17.7■□□□□ 0.42
VARS2-212ENST00000542001 RABGAP1Q9Y3P9 1069 aa17.7■□□□□ 0.42
VARS2-212ENST00000542001 COL4A3BPQ9Y5P4 624 aa17.7■□□□□ 0.42
VARS2-212ENST00000542001 FAM205AQ6ZU69 1335 aa17.7■□□□□ 0.42
VARS2-212ENST00000542001 CTIFO43310 598 aaKnown RBP17.7■□□□□ 0.42
VARS2-212ENST00000542001 HEXIM1O94992 359 aaKnown RBP17.7■□□□□ 0.42
VARS2-212ENST00000542001 VWA3BQ502W6 1294 aa17.7■□□□□ 0.42
VARS2-212ENST00000542001 ASPRV1Q53RT3 343 aa17.7■□□□□ 0.42
VARS2-212ENST00000542001 CAPN12Q6ZSI9 719 aa17.7■□□□□ 0.42
VARS2-212ENST00000542001 LRP10Q7Z4F1 713 aa17.7■□□□□ 0.42
VARS2-212ENST00000542001 GOLPH3Q9H4A6 298 aa17.7■□□□□ 0.42
VARS2-212ENST00000542001 WNT7AO00755 349 aa17.69■□□□□ 0.42
VARS2-212ENST00000542001 PLEKP08567 350 aaPredicted RBP17.69■□□□□ 0.42
VARS2-212ENST00000542001 LRCH2Q5VUJ6 765 aa17.69■□□□□ 0.42
VARS2-212ENST00000542001 SYNCQ9H7C4 482 aa17.69■□□□□ 0.42
VARS2-212ENST00000542001 EHD2Q9NZN4 543 aa17.69■□□□□ 0.42
VARS2-212ENST00000542001 MRFAP1Q9Y605 127 aa17.69■□□□□ 0.42
VARS2-212ENST00000542001 TAL1P17542 331 aaPredicted RBP17.69■□□□□ 0.42
VARS2-212ENST00000542001 DNAAF5Q86Y56 855 aa17.69■□□□□ 0.42
VARS2-212ENST00000542001 TRIM9Q9C026 710 aa17.69■□□□□ 0.42
VARS2-212ENST00000542001 VIMP08670 466 aaKnown RBP17.69■□□□□ 0.42
VARS2-212ENST00000542001 MKRN4PQ13434 485 aaPredicted RBP17.69■□□□□ 0.42
VARS2-212ENST00000542001 GRM4Q14833 912 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms