RNA–Protein interactions for RNA: ENST00000541922.1

C2CD3-216, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 5

Gene C2CD3, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-216ENST00000541922 PPP1R12CQ9BZL4 782 aa25.49■■□□□ 1.67
C2CD3-216ENST00000541922 DDX41Q9UJV9 622 aaKnown RBP25.49■■□□□ 1.67
C2CD3-216ENST00000541922 MYH7BA7E2Y1 1941 aa25.49■■□□□ 1.67
C2CD3-216ENST00000541922 SCN10AQ9Y5Y9 1956 aa25.48■■□□□ 1.67
C2CD3-216ENST00000541922 REC8O95072 547 aa25.48■■□□□ 1.67
C2CD3-216ENST00000541922 ARHGAP1Q07960 439 aa25.48■■□□□ 1.67
C2CD3-216ENST00000541922 TMTC3Q6ZXV5 915 aa25.48■■□□□ 1.67
C2CD3-216ENST00000541922 CCDC82Q8N4S0 544 aa25.48■■□□□ 1.67
C2CD3-216ENST00000541922 IL31RAQ8NI17 732 aa25.48■■□□□ 1.67
C2CD3-216ENST00000541922 AFG1LQ8WV93 481 aa25.48■■□□□ 1.67
C2CD3-216ENST00000541922 CUL5Q93034 780 aa25.48■■□□□ 1.67
C2CD3-216ENST00000541922 TRPV6Q9H1D0 765 aa25.48■■□□□ 1.67
C2CD3-216ENST00000541922 B4GALT4O60513 344 aa25.47■■□□□ 1.67
C2CD3-216ENST00000541922 HSPA4P34932 840 aa25.47■■□□□ 1.67
C2CD3-216ENST00000541922 EPHB4P54760 987 aa25.47■■□□□ 1.67
C2CD3-216ENST00000541922 KCNV1Q6PIU1 500 aa25.47■■□□□ 1.67
C2CD3-216ENST00000541922 SMARCC2Q8TAQ2 1214 aa25.47■■□□□ 1.67
C2CD3-216ENST00000541922 KCNB2Q92953 911 aa25.47■■□□□ 1.67
C2CD3-216ENST00000541922 ALDH8A1Q9H2A2 487 aaPredicted RBP25.47■■□□□ 1.67
C2CD3-216ENST00000541922 PPP4R2Q9NY27 417 aa25.47■■□□□ 1.67
C2CD3-216ENST00000541922 ZBTB43O43298 467 aa25.46■■□□□ 1.67
C2CD3-216ENST00000541922 MMP3P08254 477 aa25.46■■□□□ 1.67
C2CD3-216ENST00000541922 FGD1P98174 961 aa25.46■■□□□ 1.67
C2CD3-216ENST00000541922 PPIGQ13427 754 aaKnown RBP eCLIP25.46■■□□□ 1.67
C2CD3-216ENST00000541922 TMEM199Q8N511 208 aa25.46■■□□□ 1.67
C2CD3-216ENST00000541922 HIPK3Q9H422 1215 aa25.46■■□□□ 1.67
C2CD3-216ENST00000541922 RBM28Q9NW13 759 aaKnown RBP25.46■■□□□ 1.67
C2CD3-216ENST00000541922 RGS20O76081 388 aa25.45■■□□□ 1.66
C2CD3-216ENST00000541922 CYP2C18P33260 490 aa25.45■■□□□ 1.66
C2CD3-216ENST00000541922 LAMC2Q13753 1193 aa25.45■■□□□ 1.66
C2CD3-216ENST00000541922 NBPF20Q3BBV1 942 aa25.45■■□□□ 1.66
C2CD3-216ENST00000541922 FAM47CQ5HY64 1035 aa25.45■■□□□ 1.66
C2CD3-216ENST00000541922 BRPF3Q9ULD4 1205 aa25.45■■□□□ 1.66
C2CD3-216ENST00000541922 hCG_1642624A0A1W2PR95 340 aa25.44■■□□□ 1.66
C2CD3-216ENST00000541922 SUPT20HL2P0C7V6 817 aa25.44■■□□□ 1.66
C2CD3-216ENST00000541922 CASTP20810 708 aaKnown RBP25.44■■□□□ 1.66
C2CD3-216ENST00000541922 RTN1Q16799 776 aa25.44■■□□□ 1.66
C2CD3-216ENST00000541922 ERICH6BQ5W0A0 696 aa25.44■■□□□ 1.66
C2CD3-216ENST00000541922 NFRKBQ6P4R8 1299 aa25.44■■□□□ 1.66
C2CD3-216ENST00000541922 USP17L6PQ6QN14 398 aa25.44■■□□□ 1.66
C2CD3-216ENST00000541922 DHX37Q8IY37 1157 aaKnown RBP25.44■■□□□ 1.66
C2CD3-216ENST00000541922 EMID1Q96A84 441 aaPredicted RBP25.44■■□□□ 1.66
C2CD3-216ENST00000541922 ZFP91Q96JP5 570 aaPredicted RBP25.44■■□□□ 1.66
C2CD3-216ENST00000541922 RNPC3Q96LT9 517 aaKnown RBP25.44■■□□□ 1.66
C2CD3-216ENST00000541922 JAKMIP1Q96N16 626 aaKnown RBP25.44■■□□□ 1.66
C2CD3-216ENST00000541922 SNX14Q9Y5W7 946 aa25.44■■□□□ 1.66
C2CD3-216ENST00000541922 FRMPD4Q14CM0 1322 aa25.43■■□□□ 1.66
C2CD3-216ENST00000541922 KLF18A0A0U1RQI7 1052 aa25.43■■□□□ 1.66
C2CD3-216ENST00000541922 PIK3CDO00329 1044 aa25.43■■□□□ 1.66
C2CD3-216ENST00000541922 CSF2RAP15509 400 aa25.43■■□□□ 1.66
C2CD3-216ENST00000541922 CHMP4BP1P59074 171 aa25.43■■□□□ 1.66
C2CD3-216ENST00000541922 DGKDQ16760 1214 aa25.43■■□□□ 1.66
C2CD3-216ENST00000541922 NOC4LQ9BVI4 516 aaKnown RBP25.43■■□□□ 1.66
C2CD3-216ENST00000541922 PSTPIP2Q9H939 334 aa25.43■■□□□ 1.66
C2CD3-216ENST00000541922 TRMT13Q9NUP7 481 aaKnown RBP25.43■■□□□ 1.66
C2CD3-216ENST00000541922 MEIS2O14770 477 aa25.42■■□□□ 1.66
C2CD3-216ENST00000541922 STAM2O75886 525 aa25.42■■□□□ 1.66
C2CD3-216ENST00000541922 TGFB3P10600 412 aa25.42■■□□□ 1.66
C2CD3-216ENST00000541922 CPA1P15085 419 aa25.42■■□□□ 1.66
C2CD3-216ENST00000541922 PTPN11Q06124 597 aaPredicted RBP25.42■■□□□ 1.66
C2CD3-216ENST00000541922 GNPTABQ3T906 1256 aa25.42■■□□□ 1.66
C2CD3-216ENST00000541922 BLOC1S2Q6QNY1 142 aa25.42■■□□□ 1.66
C2CD3-216ENST00000541922 DEFB123Q8N688 67 aa25.42■■□□□ 1.66
C2CD3-216ENST00000541922 NAP1L2Q9ULW6 460 aaPredicted RBP25.42■■□□□ 1.66
C2CD3-216ENST00000541922 CNTNAP5Q8WYK1 1306 aa25.41■■□□□ 1.66
C2CD3-216ENST00000541922 LAMA3Q16787 3333 aa25.41■■□□□ 1.66
C2CD3-216ENST00000541922 GOLGA8AA7E2F4 631 aa25.41■■□□□ 1.66
C2CD3-216ENST00000541922 GOLGA8BA8MQT2 603 aa25.41■■□□□ 1.66
C2CD3-216ENST00000541922 Q7L0L9 218 aa25.41■■□□□ 1.66
C2CD3-216ENST00000541922 HEATR3Q7Z4Q2 680 aa25.41■■□□□ 1.66
C2CD3-216ENST00000541922 PPTC7Q8NI37 304 aa25.41■■□□□ 1.66
C2CD3-216ENST00000541922 PPP1R13LQ8WUF5 828 aa25.41■■□□□ 1.66
C2CD3-216ENST00000541922 UMODL1Q5DID0 1318 aa25.4■■□□□ 1.66
C2CD3-216ENST00000541922 SZT2Q5T011 3432 aa25.4■■□□□ 1.66
C2CD3-216ENST00000541922 GGPS1O95749 300 aa25.4■■□□□ 1.66
C2CD3-216ENST00000541922 CENPBP07199 599 aaPredicted RBP25.4■■□□□ 1.66
C2CD3-216ENST00000541922 RCAN1P53805 252 aa25.4■■□□□ 1.66
C2CD3-216ENST00000541922 MRPS9P82933 396 aaKnown RBP25.4■■□□□ 1.66
C2CD3-216ENST00000541922 CELF3Q5SZQ8 465 aaKnown RBP25.4■■□□□ 1.66
C2CD3-216ENST00000541922 MYSM1Q5VVJ2 828 aa25.4■■□□□ 1.66
C2CD3-216ENST00000541922 Q6ZUG5 572 aa25.4■■□□□ 1.66
C2CD3-216ENST00000541922 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.4■■□□□ 1.66
C2CD3-216ENST00000541922 SORBS3O60504 671 aa25.39■■□□□ 1.66
C2CD3-216ENST00000541922 CYP2C9P11712 490 aa25.39■■□□□ 1.66
C2CD3-216ENST00000541922 UBA1P22314 1058 aaKnown RBP25.39■■□□□ 1.66
C2CD3-216ENST00000541922 PSMA5P28066 241 aa25.39■■□□□ 1.66
C2CD3-216ENST00000541922 CCL23P55773 120 aa25.39■■□□□ 1.66
C2CD3-216ENST00000541922 GPKOWQ92917 476 aaPredicted RBP eCLIP25.39■■□□□ 1.66
C2CD3-216ENST00000541922 SPATA33Q96N06 139 aa25.39■■□□□ 1.66
C2CD3-216ENST00000541922 INPP4AQ96PE3 977 aaPredicted RBP25.39■■□□□ 1.66
C2CD3-216ENST00000541922 MLXIPQ9HAP2 919 aa25.39■■□□□ 1.66
C2CD3-216ENST00000541922 IL23AQ9NPF7 189 aa25.39■■□□□ 1.66
C2CD3-216ENST00000541922 RTEL1Q9NZ71 1219 aa25.39■■□□□ 1.66
C2CD3-216ENST00000541922 EPB41L2O43491 1005 aaKnown RBP25.38■■□□□ 1.65
C2CD3-216ENST00000541922 ACRP10323 421 aa25.38■■□□□ 1.65
C2CD3-216ENST00000541922 SMAD3P84022 425 aaKnown RBP25.38■■□□□ 1.65
C2CD3-216ENST00000541922 SP2Q02086 613 aa25.38■■□□□ 1.65
C2CD3-216ENST00000541922 APOBRQ0VD83 1088 aa25.38■■□□□ 1.65
C2CD3-216ENST00000541922 TMEM240Q5SV17 173 aa25.38■■□□□ 1.65
C2CD3-216ENST00000541922 PCNX4Q63HM2 1172 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms