RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 STOX1Q6ZVD7 989 aa10.15□□□□□ -0.78
CLSTN3-212ENST00000541770 RASGRP2Q7LDG7 609 aa10.15□□□□□ -0.78
CLSTN3-212ENST00000541770 IQCA1Q86XH1 822 aa10.15□□□□□ -0.78
CLSTN3-212ENST00000541770 NCOA7Q8NI08 942 aa10.15□□□□□ -0.78
CLSTN3-212ENST00000541770 TTC14Q96N46 770 aa10.15□□□□□ -0.78
CLSTN3-212ENST00000541770 IL17RBQ9NRM6 502 aa10.15□□□□□ -0.78
CLSTN3-212ENST00000541770 ZSWIM5Q9P217 1185 aa10.15□□□□□ -0.78
CLSTN3-212ENST00000541770 ADD3Q9UEY8 706 aaKnown RBP10.15□□□□□ -0.78
CLSTN3-212ENST00000541770 TAF6LQ9Y6J9 622 aa10.15□□□□□ -0.78
CLSTN3-212ENST00000541770 TET1Q8NFU7 2136 aa10.15□□□□□ -0.79
CLSTN3-212ENST00000541770 CHD9Q3L8U1 2897 aa10.14□□□□□ -0.79
CLSTN3-212ENST00000541770 LCHNA4D1U4 455 aa10.14□□□□□ -0.79
CLSTN3-212ENST00000541770 SSTR3P32745 418 aaPredicted RBP10.14□□□□□ -0.79
CLSTN3-212ENST00000541770 KRT32Q14532 448 aa10.14□□□□□ -0.79
CLSTN3-212ENST00000541770 CSPP1Q1MSJ5 1256 aa10.14□□□□□ -0.79
CLSTN3-212ENST00000541770 RCSD1Q6JBY9 416 aa10.14□□□□□ -0.79
CLSTN3-212ENST00000541770 RALYLQ86SE5 291 aaKnown RBP10.14□□□□□ -0.79
CLSTN3-212ENST00000541770 DGKHQ86XP1 1220 aa10.14□□□□□ -0.79
CLSTN3-212ENST00000541770 COPS5Q92905 334 aa10.14□□□□□ -0.79
CLSTN3-212ENST00000541770 GMCL1Q96IK5 515 aa10.14□□□□□ -0.79
CLSTN3-212ENST00000541770 MTA3Q9BTC8 594 aa10.14□□□□□ -0.79
CLSTN3-212ENST00000541770 CD320Q9NPF0 282 aa10.14□□□□□ -0.79
CLSTN3-212ENST00000541770 C11orf16Q9NQ32 467 aa10.14□□□□□ -0.79
CLSTN3-212ENST00000541770 SCN10AQ9Y5Y9 1956 aa10.14□□□□□ -0.79
CLSTN3-212ENST00000541770 PITPNM1O00562 1244 aa10.13□□□□□ -0.79
CLSTN3-212ENST00000541770 NMT2O60551 498 aa10.13□□□□□ -0.79
CLSTN3-212ENST00000541770 LPXNO60711 386 aa10.13□□□□□ -0.79
CLSTN3-212ENST00000541770 BAIAP3O94812 1187 aa10.13□□□□□ -0.79
CLSTN3-212ENST00000541770 SLC16A2P36021 539 aa10.13□□□□□ -0.79
CLSTN3-212ENST00000541770 PDE4DQ08499 809 aa10.13□□□□□ -0.79
CLSTN3-212ENST00000541770 PPP2R5BQ15173 497 aa10.13□□□□□ -0.79
CLSTN3-212ENST00000541770 PTGISQ16647 500 aa10.13□□□□□ -0.79
CLSTN3-212ENST00000541770 FAM117BQ6P1L5 589 aa10.13□□□□□ -0.79
CLSTN3-212ENST00000541770 MB21D2Q8IYB1 491 aaPredicted RBP10.13□□□□□ -0.79
CLSTN3-212ENST00000541770 RASEFQ8IZ41 740 aa10.13□□□□□ -0.79
CLSTN3-212ENST00000541770 CCDC155Q8N6L0 562 aa10.13□□□□□ -0.79
CLSTN3-212ENST00000541770 ANKS1AQ92625 1134 aa10.13□□□□□ -0.79
CLSTN3-212ENST00000541770 MPHOSPH6Q99547 160 aaKnown RBP10.13□□□□□ -0.79
CLSTN3-212ENST00000541770 XIRP2A4UGR9 3374 aa10.12□□□□□ -0.79
CLSTN3-212ENST00000541770 PI4K2BG5E9Z4 385 aa10.12□□□□□ -0.79
CLSTN3-212ENST00000541770 NFIBO00712 420 aa10.12□□□□□ -0.79
CLSTN3-212ENST00000541770 ICAM1P05362 532 aa10.12□□□□□ -0.79
CLSTN3-212ENST00000541770 HMGB1P09429 215 aaKnown RBP10.12□□□□□ -0.79
CLSTN3-212ENST00000541770 TXNP10599 105 aaKnown RBP10.12□□□□□ -0.79
CLSTN3-212ENST00000541770 TOP1P11387 765 aaKnown RBP10.12□□□□□ -0.79
CLSTN3-212ENST00000541770 IL9P15248 144 aa10.12□□□□□ -0.79
CLSTN3-212ENST00000541770 KCNA5P22460 613 aa10.12□□□□□ -0.79
CLSTN3-212ENST00000541770 WDR5P61964 334 aaKnown RBP10.12□□□□□ -0.79
CLSTN3-212ENST00000541770 DEFB103AP81534 67 aa10.12□□□□□ -0.79
CLSTN3-212ENST00000541770 TTBK2Q6IQ55 1244 aa10.12□□□□□ -0.79
CLSTN3-212ENST00000541770 NFRKBQ6P4R8 1299 aa10.12□□□□□ -0.79
CLSTN3-212ENST00000541770 SLC30A10Q6XR72 485 aa10.12□□□□□ -0.79
CLSTN3-212ENST00000541770 RNF207Q6ZRF8 634 aa10.12□□□□□ -0.79
CLSTN3-212ENST00000541770 EP400NLQ6ZTU2 488 aa10.12□□□□□ -0.79
CLSTN3-212ENST00000541770 CYB5R4Q7L1T6 521 aa10.12□□□□□ -0.79
CLSTN3-212ENST00000541770 MORC4Q8TE76 937 aa10.12□□□□□ -0.79
CLSTN3-212ENST00000541770 ZSCAN10Q96SZ4 725 aaPredicted RBP10.12□□□□□ -0.79
CLSTN3-212ENST00000541770 UBAC1Q9BSL1 405 aa10.12□□□□□ -0.79
CLSTN3-212ENST00000541770 UBE2ZQ9H832 354 aaPredicted RBP10.12□□□□□ -0.79
CLSTN3-212ENST00000541770 SNX14Q9Y5W7 946 aa10.12□□□□□ -0.79
CLSTN3-212ENST00000541770 CHD7Q9P2D1 2997 aa10.12□□□□□ -0.79
CLSTN3-212ENST00000541770 MYH7BA7E2Y1 1941 aa10.11□□□□□ -0.79
CLSTN3-212ENST00000541770 FRMPD2Q68DX3 1309 aaPredicted RBP10.11□□□□□ -0.79
CLSTN3-212ENST00000541770 WDR19Q8NEZ3 1342 aa10.11□□□□□ -0.79
CLSTN3-212ENST00000541770 PRR33A8MZF0 331 aa10.11□□□□□ -0.79
CLSTN3-212ENST00000541770 NKRFO15226 690 aaKnown RBP eCLIP10.11□□□□□ -0.79
CLSTN3-212ENST00000541770 KPNA6O60684 536 aa10.11□□□□□ -0.79
CLSTN3-212ENST00000541770 PLA2G6O60733 806 aa10.11□□□□□ -0.79
CLSTN3-212ENST00000541770 SEC24BO95487 1268 aa10.11□□□□□ -0.79
CLSTN3-212ENST00000541770 MCM5P33992 734 aa10.11□□□□□ -0.79
CLSTN3-212ENST00000541770 ANAPC15P60006 121 aa10.11□□□□□ -0.79
CLSTN3-212ENST00000541770 PTPN11Q06124 597 aaPredicted RBP10.11□□□□□ -0.79
CLSTN3-212ENST00000541770 SART3Q15020 963 aaKnown RBP10.11□□□□□ -0.79
CLSTN3-212ENST00000541770 SEC23AQ15436 765 aa10.11□□□□□ -0.79
CLSTN3-212ENST00000541770 ADCK5Q3MIX3 580 aa10.11□□□□□ -0.79
CLSTN3-212ENST00000541770 CHST3Q7LGC8 479 aa10.11□□□□□ -0.79
CLSTN3-212ENST00000541770 GJD3Q8N144 294 aa10.11□□□□□ -0.79
CLSTN3-212ENST00000541770 ENAHQ8N8S7 591 aaPredicted RBP10.11□□□□□ -0.79
CLSTN3-212ENST00000541770 SCFD2Q8WU76 684 aa10.11□□□□□ -0.79
CLSTN3-212ENST00000541770 IL17RAQ96F46 866 aa10.11□□□□□ -0.79
CLSTN3-212ENST00000541770 TMEM87BQ96K49 555 aa10.11□□□□□ -0.79
CLSTN3-212ENST00000541770 NEK1Q96PY6 1258 aa10.11□□□□□ -0.79
CLSTN3-212ENST00000541770 TMEM47Q9BQJ4 181 aa10.11□□□□□ -0.79
CLSTN3-212ENST00000541770 ZKSCAN3Q9BRR0 538 aa10.11□□□□□ -0.79
CLSTN3-212ENST00000541770 RANBP17Q9H2T7 1088 aaKnown RBP10.11□□□□□ -0.79
CLSTN3-212ENST00000541770 SUGCTQ9HAC7 445 aa10.11□□□□□ -0.79
CLSTN3-212ENST00000541770 GPCPD1Q9NPB8 672 aa10.11□□□□□ -0.79
CLSTN3-212ENST00000541770 KIAA1217Q5T5P2 1943 aa10.1□□□□□ -0.79
CLSTN3-212ENST00000541770 RBM47A0AV96 593 aaKnown RBP10.1□□□□□ -0.79
CLSTN3-212ENST00000541770 ERICH2A1L162 156 aa10.1□□□□□ -0.79
CLSTN3-212ENST00000541770 RBAK-RBAKDNI3L0D1 243 aa10.1□□□□□ -0.79
CLSTN3-212ENST00000541770 IFIT3O14879 490 aaKnown RBP10.1□□□□□ -0.79
CLSTN3-212ENST00000541770 PSMA5P28066 241 aa10.1□□□□□ -0.79
CLSTN3-212ENST00000541770 ANTXR2P58335 489 aa10.1□□□□□ -0.79
CLSTN3-212ENST00000541770 IFIT1BQ5T764 474 aaKnown RBP10.1□□□□□ -0.79
CLSTN3-212ENST00000541770 SYDE2Q5VT97 1194 aa10.1□□□□□ -0.79
CLSTN3-212ENST00000541770 PTCRAQ6ISU1 281 aaPredicted RBP10.1□□□□□ -0.79
CLSTN3-212ENST00000541770 GDF6Q6KF10 455 aaPredicted RBP10.1□□□□□ -0.79
CLSTN3-212ENST00000541770 CNKSR3Q6P9H4 555 aa10.1□□□□□ -0.79
CLSTN3-212ENST00000541770 LRRC8DQ7L1W4 858 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms