RNA–Protein interactions for RNA: ENST00000541549.2

EIF3A-203, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3A, Length 4,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-203ENST00000541549 SH2D4AQ9H788 454 aa13.11□□□□□ -0.31
EIF3A-203ENST00000541549 MAP3K15Q6ZN16 1313 aa13.11□□□□□ -0.31
EIF3A-203ENST00000541549 SEMA3EO15041 775 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 DAPK3O43293 454 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 ECM2O94769 699 aaPredicted RBP13.1□□□□□ -0.31
EIF3A-203ENST00000541549 PHBP35232 272 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 COG7P83436 770 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 PPP2R5CQ13362 524 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 NFRKBQ6P4R8 1299 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 GBP7Q8N8V2 638 aaPredicted RBP13.1□□□□□ -0.31
EIF3A-203ENST00000541549 COG1Q8WTW3 980 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 USP40Q9NVE5 1235 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 TMEM2Q9UHN6 1383 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 SERPING1P05155 500 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 BFSP1Q12934 665 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 MAP7Q14244 749 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 FAM186BQ8IYM0 893 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 CEP120Q8N960 986 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 RIN2Q8WYP3 895 aaPredicted RBP13.1□□□□□ -0.31
EIF3A-203ENST00000541549 THOC1Q96FV9 657 aaKnown RBP13.1□□□□□ -0.31
EIF3A-203ENST00000541549 CNOT10Q9H9A5 744 aaKnown RBP13.1□□□□□ -0.31
EIF3A-203ENST00000541549 PALMO75781 387 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 CHGBP05060 677 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 MYL1P05976 194 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 CDC27P30260 824 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 MCAMP43121 646 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 RASGRF1Q13972 1273 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 SGO2Q562F6 1265 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 ZNF449Q6P9G9 518 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 CYB5R4Q7L1T6 521 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 PBKQ96KB5 322 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 C1orf112Q9NSG2 853 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 ZBTB1Q9Y2K1 713 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 RABGAP1Q9Y3P9 1069 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 TTLL3Q9Y4R7 772 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 USH1CQ9Y6N9 552 aa13.1□□□□□ -0.31
EIF3A-203ENST00000541549 KIF28PB7ZC32 967 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 MEIS1O00470 390 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 GMNNO75496 209 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 FGGP02679 453 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 USP14P54578 494 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 HSPA2P54652 639 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 TRIP13Q15645 432 aaPredicted RBP13.09□□□□□ -0.31
EIF3A-203ENST00000541549 USP17L2Q6R6M4 530 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 STOX1Q6ZVD7 989 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 MIER3Q7Z3K6 550 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 PDCD7Q8N8D1 485 aaKnown RBP13.09□□□□□ -0.31
EIF3A-203ENST00000541549 COA7Q96BR5 231 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 TRIM4Q9C037 500 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 EMILIN3Q9NT22 766 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 ACSL3O95573 720 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 NSFP46459 744 aaKnown RBP13.09□□□□□ -0.31
EIF3A-203ENST00000541549 FAM102BQ5T8I3 360 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 AEBP2Q6ZN18 517 aaPredicted RBP13.09□□□□□ -0.31
EIF3A-203ENST00000541549 SLFN12Q8IYM2 578 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 ZNF653Q96CK0 615 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.09□□□□□ -0.31
EIF3A-203ENST00000541549 GCNT4Q9P109 453 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 CCNL1Q9UK58 526 aaPredicted RBP13.09□□□□□ -0.31
EIF3A-203ENST00000541549 ANO9A1A5B4 782 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 NCK2O43639 380 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 ARHGEF18Q6ZSZ5 1173 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 ANKRD35Q8N283 1001 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 RBM17Q96I25 401 aaKnown RBP13.09□□□□□ -0.31
EIF3A-203ENST00000541549 IWS1Q96ST2 819 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 SNX24Q9Y343 169 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 ADGBQ8N7X0 1667 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 ATP1A1P05023 1023 aaKnown RBP13.09□□□□□ -0.31
EIF3A-203ENST00000541549 TMED2Q15363 201 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 KRT26Q7Z3Y9 468 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 PIGSQ96S52 555 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 ZMYND12Q9H0C1 365 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 STK17AQ9UEE5 414 aa13.09□□□□□ -0.31
EIF3A-203ENST00000541549 ECEL1O95672 775 aa13.08□□□□□ -0.32
EIF3A-203ENST00000541549 SERPINB6P35237 376 aa13.08□□□□□ -0.32
EIF3A-203ENST00000541549 BTDP43251 543 aa13.08□□□□□ -0.32
EIF3A-203ENST00000541549 DR1Q01658 176 aa13.08□□□□□ -0.32
EIF3A-203ENST00000541549 TMCO4Q5TGY1 634 aa13.08□□□□□ -0.32
EIF3A-203ENST00000541549 METTL16Q86W50 562 aaKnown RBP13.08□□□□□ -0.32
EIF3A-203ENST00000541549 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.08□□□□□ -0.32
EIF3A-203ENST00000541549 SLC24A3Q9HC58 644 aa13.08□□□□□ -0.32
EIF3A-203ENST00000541549 ATG3Q9NT62 314 aa13.08□□□□□ -0.32
EIF3A-203ENST00000541549 MMEP08473 750 aa13.08□□□□□ -0.32
EIF3A-203ENST00000541549 DDIT3P35638 169 aa13.08□□□□□ -0.32
EIF3A-203ENST00000541549 POLE2P56282 527 aa13.08□□□□□ -0.32
EIF3A-203ENST00000541549 YWHAGP61981 247 aaKnown RBP eCLIP13.08□□□□□ -0.322e-6■■□□□ 14.2
EIF3A-203ENST00000541549 SCYL2Q6P3W7 929 aa13.08□□□□□ -0.32
EIF3A-203ENST00000541549 TBC1D22AQ8WUA7 517 aa13.08□□□□□ -0.32
EIF3A-203ENST00000541549 TMOD1P28289 359 aa13.08□□□□□ -0.32
EIF3A-203ENST00000541549 MAGOHP61326 146 aaKnown RBP13.08□□□□□ -0.32
EIF3A-203ENST00000541549 MYL7Q01449 175 aa13.08□□□□□ -0.32
EIF3A-203ENST00000541549 ARL6IP4Q66PJ3 421 aaKnown RBP13.08□□□□□ -0.32
EIF3A-203ENST00000541549 CHP1Q99653 195 aa13.08□□□□□ -0.32
EIF3A-203ENST00000541549 TACC3Q9Y6A5 838 aa13.08□□□□□ -0.32
EIF3A-203ENST00000541549 WDR91A4D1P6 747 aa13.07□□□□□ -0.32
EIF3A-203ENST00000541549 LRRC53A6NM62 1247 aa13.07□□□□□ -0.32
EIF3A-203ENST00000541549 H0Y3Z8 333 aa13.07□□□□□ -0.32
EIF3A-203ENST00000541549 SLC16A2P36021 539 aa13.07□□□□□ -0.32
EIF3A-203ENST00000541549 XKR9Q5GH70 373 aa13.07□□□□□ -0.32
EIF3A-203ENST00000541549 FBXO11Q86XK2 927 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms