RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 SHOX2O60902 331 aaPredicted RBP11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 PRDX5P30044 214 aa11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 IRAK1P51617 712 aa11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 IQCEQ6IPM2 695 aa11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 NFRKBQ6P4R8 1299 aa11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 CNKSR1Q969H4 720 aa11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 ERGIC2Q96RQ1 377 aa11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 IFIH1Q9BYX4 1025 aaKnown RBP11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 MCM9Q9NXL9 1143 aa11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 MAD2L2Q9UI95 211 aa11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 CD2APQ9Y5K6 639 aa11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 CYTH3O43739 400 aa11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 TACC1O75410 805 aa11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 EIF4A3P38919 411 aaKnown RBP11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 CCT5P48643 541 aa11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 CDK17Q00537 523 aa11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 FKBP15Q5T1M5 1219 aa11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 TTC19Q6DKK2 380 aaPredicted RBP11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 CCDC70Q6NSX1 233 aa11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 FAM114A1Q8IWE2 563 aa11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 ZSCAN29Q8IWY8 852 aaPredicted RBP11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 SPATA4Q8NEY3 305 aa11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 TRIM58Q8NG06 486 aa11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 IPO4Q8TEX9 1081 aaKnown RBP11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 DYNLL2Q96FJ2 89 aa11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 TSGA10Q9BZW7 698 aa11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 SEMA6BQ9H3T3 888 aa11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 SH2D4AQ9H788 454 aa11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 FAM207AQ9NSI2 230 aaPredicted RBP11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 ATP8A2Q9NTI2 1148 aa11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 POLLQ9UGP5 575 aa11.7□□□□□ -0.54
PHACTR3-209ENST00000541461 A0A1W2PQJ5 194 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 USP17L3A6NCW0 530 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 USP17L4A6NCW7 530 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 STXBP3O00186 592 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 NCK2O43639 380 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 USO1O60763 962 aaKnown RBP11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 UFL1O94874 794 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 ERCC3P19447 782 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 USP17L1Q7RTZ2 530 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 AMOTL1Q8IY63 956 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 ANKRD13CQ8N6S4 541 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 PPM1EQ8WY54 764 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 OSBPL9Q96SU4 736 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 CPVLQ9H3G5 476 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 SLC39A2Q9NP94 309 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 TCP11L1Q9NUJ3 509 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 ARPP21Q9UBL0 812 aaPredicted RBP11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 ATP6V0A2Q9Y487 856 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 LAMB1P07942 1786 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 C6orf229H3BNL8 230 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 RIMBP2O15034 1052 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 C21orf2O43822 256 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 GOLGA8HP0CJ92 632 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 TECP42680 631 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 KIF11P52732 1056 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 GRM4Q14833 912 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 LETM2Q2VYF4 491 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 SBK1Q52WX2 424 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 FIGNQ5HY92 759 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 FBXO33Q7Z6M2 555 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 SP8Q8IXZ3 490 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 TTLL6Q8N841 843 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 TSEN2Q8NCE0 465 aaKnown RBP11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 KIAA0895Q8NCT3 520 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 CCDC47Q96A33 483 aaKnown RBP11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 C7orf25Q9BPX7 421 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 ANKRD2Q9GZV1 360 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 SALL4Q9UJQ4 1053 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 PLAGL2Q9UPG8 496 aa11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.69□□□□□ -0.54
PHACTR3-209ENST00000541461 CCNT1O60563 726 aaKnown RBP11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 PRPHP41219 470 aa11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 ATP2B2Q01814 1243 aa11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 PPFIA1Q13136 1202 aa11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 TMC4Q7Z404 712 aa11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 NLGN2Q8NFZ4 835 aa11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 CAPS2Q9BXY5 557 aa11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 DEF6Q9H4E7 631 aa11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 MMRN2Q9H8L6 949 aa11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 BARHL2Q9NY43 387 aa11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 SIK3Q9Y2K2 1263 aa11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 KIAA1551Q9HCM1 1747 aa11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 LAD1O00515 517 aa11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 AKR1B10O60218 316 aa11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 OR52Z1P0C646 297 aa11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 HNRNPH3P31942 346 aaKnown RBP11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 GNGT1P63211 74 aa11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 VWA3BQ502W6 1294 aa11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 TMED8Q6PL24 325 aaPredicted RBP11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 RRAGAQ7L523 313 aa11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 DGKHQ86XP1 1220 aa11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 EFCAB13Q8IY85 973 aa11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 DAGLBQ8NCG7 672 aa11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 ARL8AQ96BM9 186 aa11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 FHDC1Q9C0D6 1143 aaPredicted RBP11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 TMX4Q9H1E5 349 aaPredicted RBP11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 NDST4Q9H3R1 872 aa11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 CUEDC2Q9H467 287 aa11.68□□□□□ -0.54
PHACTR3-209ENST00000541461 PIM2Q9P1W9 311 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms