RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 EYA3Q99504 573 aa10.62□□□□□ -0.71
CNOT4-212ENST00000541284 MED4Q9NPJ6 270 aa10.62□□□□□ -0.71
CNOT4-212ENST00000541284 KRT86O43790 486 aa10.62□□□□□ -0.71
CNOT4-212ENST00000541284 TDP2O95551 362 aa10.62□□□□□ -0.71
CNOT4-212ENST00000541284 BTDP43251 543 aa10.62□□□□□ -0.71
CNOT4-212ENST00000541284 CLK2P49760 499 aaKnown RBP10.62□□□□□ -0.71
CNOT4-212ENST00000541284 UNC13DQ70J99 1090 aa10.62□□□□□ -0.71
CNOT4-212ENST00000541284 FGFBP2Q9BYJ0 223 aa10.62□□□□□ -0.71
CNOT4-212ENST00000541284 MAGEC2Q9UBF1 373 aaPredicted RBP10.62□□□□□ -0.71
CNOT4-212ENST00000541284 BIN2Q9UBW5 565 aaPredicted RBP10.62□□□□□ -0.71
CNOT4-212ENST00000541284 MTMR7Q9Y216 660 aa10.62□□□□□ -0.71
CNOT4-212ENST00000541284 PJA2O43164 708 aa10.62□□□□□ -0.71
CNOT4-212ENST00000541284 EIF3JO75822 258 aaKnown RBP10.62□□□□□ -0.71
CNOT4-212ENST00000541284 NOL4O94818 638 aa10.62□□□□□ -0.71
CNOT4-212ENST00000541284 GPSM2P81274 684 aa10.62□□□□□ -0.71
CNOT4-212ENST00000541284 ITIH3Q06033 890 aa10.62□□□□□ -0.71
CNOT4-212ENST00000541284 FAM182BQ5T319 152 aa10.62□□□□□ -0.71
CNOT4-212ENST00000541284 ZNF444Q8N0Y2 327 aaPredicted RBP10.62□□□□□ -0.71
CNOT4-212ENST00000541284 DNAJC19Q96DA6 116 aa10.62□□□□□ -0.71
CNOT4-212ENST00000541284 RPGRIP1Q96KN7 1286 aa10.62□□□□□ -0.71
CNOT4-212ENST00000541284 NDST4Q9H3R1 872 aa10.62□□□□□ -0.71
CNOT4-212ENST00000541284 TLR2O60603 784 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 RNF40O75150 1001 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 PDHBP11177 359 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 GABPAQ06546 454 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 FOXR2Q6PJQ5 311 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 TPTE2Q6XPS3 522 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 GUF1Q8N442 669 aaKnown RBP10.61□□□□□ -0.71
CNOT4-212ENST00000541284 C7orf43Q8WVR3 580 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 TRERF1Q96PN7 1200 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 PCDHA13Q9Y5I0 950 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 PVALEFA0A1B0GWK0 134 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 MACROD2A1Z1Q3 448 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 PRLRP16471 622 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 MTIF2P46199 727 aaKnown RBP10.61□□□□□ -0.71
CNOT4-212ENST00000541284 GPS2Q13227 327 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 DPY19L2P1Q6NXN4 242 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 KIAA1328Q86T90 577 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 CCDC155Q8N6L0 562 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 EHBP1Q8NDI1 1231 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 HAS1Q92839 578 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 SELENOOQ9BVL4 669 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 UBA5Q9GZZ9 404 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 FAM204AQ9H8W3 233 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 DMGDHQ9UI17 866 aaKnown RBP10.61□□□□□ -0.71
CNOT4-212ENST00000541284 PCDHA2Q9Y5H9 948 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 SBF1O95248 1867 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 POTEMA6NI47 508 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 RBAK-RBAKDNI3L0D1 243 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 SHOX2O60902 331 aaPredicted RBP10.61□□□□□ -0.71
CNOT4-212ENST00000541284 PPP1R2P41236 205 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 KIF11P52732 1056 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 SRLQ86TD4 932 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 FAM114A1Q8IWE2 563 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 RASSF8Q8NHQ8 419 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 RAD54LQ92698 747 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 C6orf50Q9HD87 102 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 SMARCAL1Q9NZC9 954 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 EHD2Q9NZN4 543 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 STK17AQ9UEE5 414 aa10.61□□□□□ -0.71
CNOT4-212ENST00000541284 LRRC53A6NM62 1247 aa10.6□□□□□ -0.71
CNOT4-212ENST00000541284 PES1O00541 588 aaKnown RBP10.6□□□□□ -0.71
CNOT4-212ENST00000541284 PHACTR2O75167 634 aa10.6□□□□□ -0.71
CNOT4-212ENST00000541284 MOCS3O95396 460 aa10.6□□□□□ -0.71
CNOT4-212ENST00000541284 EIF4A3P38919 411 aaKnown RBP10.6□□□□□ -0.71
CNOT4-212ENST00000541284 GSTO1P78417 241 aa10.6□□□□□ -0.71
CNOT4-212ENST00000541284 SECISBP2LQ93073 1101 aaKnown RBP10.6□□□□□ -0.71
CNOT4-212ENST00000541284 MTMR8Q96EF0 704 aa10.6□□□□□ -0.71
CNOT4-212ENST00000541284 CD209Q9NNX6 404 aa10.6□□□□□ -0.71
CNOT4-212ENST00000541284 LOXHD1Q8IVV2 1947 aa10.6□□□□□ -0.71
CNOT4-212ENST00000541284 TRIM66O15016 1216 aa10.6□□□□□ -0.71
CNOT4-212ENST00000541284 BAG3O95817 575 aa10.6□□□□□ -0.71
CNOT4-212ENST00000541284 IDEP14735 1019 aa10.6□□□□□ -0.71
CNOT4-212ENST00000541284 CKAP4Q07065 602 aaKnown RBP10.6□□□□□ -0.71
CNOT4-212ENST00000541284 MAPK8IP2Q13387 824 aaPredicted RBP10.6□□□□□ -0.71
CNOT4-212ENST00000541284 MAN2A1Q16706 1144 aa10.6□□□□□ -0.71
CNOT4-212ENST00000541284 REXO1Q8N1G1 1221 aaKnown RBP10.6□□□□□ -0.71
CNOT4-212ENST00000541284 LARP4BQ92615 738 aaKnown RBP10.6□□□□□ -0.71
CNOT4-212ENST00000541284 RRP36Q96EU6 259 aaKnown RBP10.6□□□□□ -0.71
CNOT4-212ENST00000541284 TLR10Q9BXR5 811 aa10.6□□□□□ -0.71
CNOT4-212ENST00000541284 POLLQ9UGP5 575 aa10.6□□□□□ -0.71
CNOT4-212ENST00000541284 JRKLQ9Y4A0 524 aa10.6□□□□□ -0.71
CNOT4-212ENST00000541284 GNA11P29992 359 aa10.6□□□□□ -0.71
CNOT4-212ENST00000541284 GGCXP38435 758 aa10.6□□□□□ -0.71
CNOT4-212ENST00000541284 TXKP42681 527 aa10.6□□□□□ -0.71
CNOT4-212ENST00000541284 ATP2B2Q01814 1243 aa10.6□□□□□ -0.71
CNOT4-212ENST00000541284 PDXDC1Q6P996 788 aa10.6□□□□□ -0.71
CNOT4-212ENST00000541284 C2CD5Q86YS7 1000 aa10.6□□□□□ -0.71
CNOT4-212ENST00000541284 ZC3H3Q8IXZ2 948 aaKnown RBP10.6□□□□□ -0.71
CNOT4-212ENST00000541284 COA7Q96BR5 231 aa10.6□□□□□ -0.71
CNOT4-212ENST00000541284 GDAP1L1Q96MZ0 367 aa10.6□□□□□ -0.71
CNOT4-212ENST00000541284 SH3GL2Q99962 352 aa10.6□□□□□ -0.71
CNOT4-212ENST00000541284 LRRC1Q9BTT6 524 aa10.6□□□□□ -0.71
CNOT4-212ENST00000541284 FAM207AQ9NSI2 230 aaPredicted RBP10.6□□□□□ -0.71
CNOT4-212ENST00000541284 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.59□□□□□ -0.71
CNOT4-212ENST00000541284 TRAPPC3LQ5T215 181 aa10.59□□□□□ -0.71
CNOT4-212ENST00000541284 HAUS3Q68CZ6 603 aa10.59□□□□□ -0.71
CNOT4-212ENST00000541284 NFRKBQ6P4R8 1299 aa10.59□□□□□ -0.71
CNOT4-212ENST00000541284 CLEC10AQ8IUN9 316 aa10.59□□□□□ -0.71
CNOT4-212ENST00000541284 IQCDQ96DY2 449 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms