RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 BLIDQ8IZY5 108 aa21.46■■□□□ 1.03
VPS33A-205ENST00000541169 ANO3Q9BYT9 981 aa21.46■■□□□ 1.03
VPS33A-205ENST00000541169 CD2BP2O95400 341 aaKnown RBP21.45■■□□□ 1.02
VPS33A-205ENST00000541169 MYCLP12524 364 aaPredicted RBP21.45■■□□□ 1.02
VPS33A-205ENST00000541169 SREBF1P36956 1147 aa21.45■■□□□ 1.02
VPS33A-205ENST00000541169 DUSP28Q4G0W2 176 aa21.45■■□□□ 1.02
VPS33A-205ENST00000541169 FBXO16Q8IX29 292 aaPredicted RBP21.45■■□□□ 1.02
VPS33A-205ENST00000541169 WDR11Q9BZH6 1224 aa21.45■■□□□ 1.02
VPS33A-205ENST00000541169 XPNPEP3Q9NQH7 507 aa21.45■■□□□ 1.02
VPS33A-205ENST00000541169 KIAA1217Q5T5P2 1943 aa21.45■■□□□ 1.02
VPS33A-205ENST00000541169 K7ELQ4 463 aaPredicted RBP21.44■■□□□ 1.02
VPS33A-205ENST00000541169 JAK2O60674 1132 aa21.44■■□□□ 1.02
VPS33A-205ENST00000541169 NKX3-2P78367 333 aa21.44■■□□□ 1.02
VPS33A-205ENST00000541169 SAFBQ15424 915 aaKnown RBP eCLIP21.44■■□□□ 1.02
VPS33A-205ENST00000541169 BRDTQ58F21 947 aaPredicted RBP21.44■■□□□ 1.02
VPS33A-205ENST00000541169 EEPD1Q7L9B9 569 aa21.44■■□□□ 1.02
VPS33A-205ENST00000541169 KRT25Q7Z3Z0 450 aa21.44■■□□□ 1.02
VPS33A-205ENST00000541169 RNF180Q86T96 592 aa21.44■■□□□ 1.02
VPS33A-205ENST00000541169 INTS4Q96HW7 963 aaKnown RBP21.44■■□□□ 1.02
VPS33A-205ENST00000541169 C8orf76Q96K31 380 aa21.44■■□□□ 1.02
VPS33A-205ENST00000541169 INPP4AQ96PE3 977 aaPredicted RBP21.44■■□□□ 1.02
VPS33A-205ENST00000541169 CYP3A4P08684 503 aa21.43■■□□□ 1.02
VPS33A-205ENST00000541169 TXNP10599 105 aaKnown RBP21.43■■□□□ 1.02
VPS33A-205ENST00000541169 ICAM3P32942 547 aa21.43■■□□□ 1.02
VPS33A-205ENST00000541169 USP11P51784 963 aa21.43■■□□□ 1.02
VPS33A-205ENST00000541169 CUL4AQ13619 759 aa21.43■■□□□ 1.02
VPS33A-205ENST00000541169 NIPA1Q7RTP0 329 aa21.43■■□□□ 1.02
VPS33A-205ENST00000541169 HSCBQ8IWL3 235 aa21.43■■□□□ 1.02
VPS33A-205ENST00000541169 GIMAP8Q8ND71 665 aaPredicted RBP21.43■■□□□ 1.02
VPS33A-205ENST00000541169 GPRASP2Q96D09 838 aa21.43■■□□□ 1.02
VPS33A-205ENST00000541169 AIFM3Q96NN9 605 aa21.43■■□□□ 1.02
VPS33A-205ENST00000541169 AP5M1Q9H0R1 490 aa21.43■■□□□ 1.02
VPS33A-205ENST00000541169 GNEQ9Y223 722 aaKnown RBP21.43■■□□□ 1.02
VPS33A-205ENST00000541169 FIBPO43427 364 aa21.42■■□□□ 1.02
VPS33A-205ENST00000541169 MMP1P03956 469 aa21.42■■□□□ 1.02
VPS33A-205ENST00000541169 CST5P28325 142 aaPredicted RBP21.42■■□□□ 1.02
VPS33A-205ENST00000541169 ADCYAP1R1P41586 468 aa21.42■■□□□ 1.02
VPS33A-205ENST00000541169 FRMPD3Q5JV73 1810 aa21.42■■□□□ 1.02
VPS33A-205ENST00000541169 JAKMIP3Q5VZ66 844 aa21.42■■□□□ 1.02
VPS33A-205ENST00000541169 PCSK9Q8NBP7 692 aaKnown RBP21.42■■□□□ 1.02
VPS33A-205ENST00000541169 NAP1L4Q99733 375 aaKnown RBP21.42■■□□□ 1.02
VPS33A-205ENST00000541169 TSEN34Q9BSV6 310 aaKnown RBP21.42■■□□□ 1.02
VPS33A-205ENST00000541169 UPF3AQ9H1J1 476 aaKnown RBP21.42■■□□□ 1.02
VPS33A-205ENST00000541169 SMC3Q9UQE7 1217 aa21.42■■□□□ 1.02
VPS33A-205ENST00000541169 MRVI1Q9Y6F6 885 aa21.42■■□□□ 1.02
VPS33A-205ENST00000541169 M0R2N6 131 aa21.41■■□□□ 1.02
VPS33A-205ENST00000541169 DNM1LO00429 736 aa21.41■■□□□ 1.02
VPS33A-205ENST00000541169 ZEB2O60315 1214 aa21.41■■□□□ 1.02
VPS33A-205ENST00000541169 KRT2P35908 639 aa21.41■■□□□ 1.02
VPS33A-205ENST00000541169 GJA9P57773 515 aa21.41■■□□□ 1.02
VPS33A-205ENST00000541169 MRPS9P82933 396 aaKnown RBP21.41■■□□□ 1.02
VPS33A-205ENST00000541169 ARHGAP4P98171 946 aa21.41■■□□□ 1.02
VPS33A-205ENST00000541169 CCDC62Q6P9F0 684 aa21.41■■□□□ 1.02
VPS33A-205ENST00000541169 SEPT14Q6ZU15 432 aa21.41■■□□□ 1.02
VPS33A-205ENST00000541169 SENP7Q9BQF6 1050 aa21.41■■□□□ 1.02
VPS33A-205ENST00000541169 PDGFCQ9NRA1 345 aa21.41■■□□□ 1.02
VPS33A-205ENST00000541169 KIAA0100Q14667 2235 aaKnown RBP21.41■■□□□ 1.02
VPS33A-205ENST00000541169 CCDC194A0A1B0GVG4 234 aa21.4■■□□□ 1.02
VPS33A-205ENST00000541169 POTEFA5A3E0 1075 aa21.4■■□□□ 1.02
VPS33A-205ENST00000541169 KBTBD13C9JR72 458 aa21.4■■□□□ 1.02
VPS33A-205ENST00000541169 PDIA4P13667 645 aaKnown RBP21.4■■□□□ 1.02
VPS33A-205ENST00000541169 SMPD1P17405 629 aa21.4■■□□□ 1.02
VPS33A-205ENST00000541169 PDCP20941 246 aa21.4■■□□□ 1.02
VPS33A-205ENST00000541169 CPT1AP50416 773 aa21.4■■□□□ 1.02
VPS33A-205ENST00000541169 NEDD9Q14511 834 aa21.4■■□□□ 1.02
VPS33A-205ENST00000541169 NONOQ15233 471 aaKnown RBP eCLIP21.4■■□□□ 1.02
VPS33A-205ENST00000541169 CEP55Q53EZ4 464 aa21.4■■□□□ 1.02
VPS33A-205ENST00000541169 KRT40Q6A162 431 aa21.4■■□□□ 1.02
VPS33A-205ENST00000541169 TLK2Q86UE8 772 aa21.4■■□□□ 1.02
VPS33A-205ENST00000541169 FBXO18Q8NFZ0 1043 aa21.4■■□□□ 1.02
VPS33A-205ENST00000541169 IL31RAQ8NI17 732 aa21.4■■□□□ 1.02
VPS33A-205ENST00000541169 CRYGNQ8WXF5 182 aa21.4■■□□□ 1.02
VPS33A-205ENST00000541169 EMID1Q96A84 441 aaPredicted RBP21.4■■□□□ 1.02
VPS33A-205ENST00000541169 JADE2Q9NQC1 790 aa21.4■■□□□ 1.02
VPS33A-205ENST00000541169 TMEM260Q9NX78 707 aa21.4■■□□□ 1.02
VPS33A-205ENST00000541169 KCNJ14Q9UNX9 436 aa21.4■■□□□ 1.02
VPS33A-205ENST00000541169 UBIAD1Q9Y5Z9 338 aa21.4■■□□□ 1.02
VPS33A-205ENST00000541169 SYNRGQ9UMZ2 1314 aa21.39■■□□□ 1.01
VPS33A-205ENST00000541169 MOXD2PA6NHM9 499 aa21.39■■□□□ 1.01
VPS33A-205ENST00000541169 SPATA31C2B4DYI2 1134 aa21.39■■□□□ 1.01
VPS33A-205ENST00000541169 KPNA6O60684 536 aa21.39■■□□□ 1.01
VPS33A-205ENST00000541169 GH1P01241 217 aa21.39■■□□□ 1.01
VPS33A-205ENST00000541169 CIITAP33076 1130 aa21.39■■□□□ 1.01
VPS33A-205ENST00000541169 ZNF76P36508 570 aa21.39■■□□□ 1.01
VPS33A-205ENST00000541169 SETQ01105 290 aaPredicted RBP21.39■■□□□ 1.01
VPS33A-205ENST00000541169 MTMR1Q13613 665 aa21.39■■□□□ 1.01
VPS33A-205ENST00000541169 LAMC2Q13753 1193 aa21.39■■□□□ 1.01
VPS33A-205ENST00000541169 NPY5RQ15761 445 aa21.39■■□□□ 1.01
VPS33A-205ENST00000541169 MOXD1Q6UVY6 613 aa21.39■■□□□ 1.01
VPS33A-205ENST00000541169 SHISA4Q96DD7 197 aa21.39■■□□□ 1.01
VPS33A-205ENST00000541169 MXRA8Q9BRK3 442 aa21.39■■□□□ 1.01
VPS33A-205ENST00000541169 DDX41Q9UJV9 622 aaKnown RBP21.39■■□□□ 1.01
VPS33A-205ENST00000541169 CENPFP49454 3210 aa21.38■■□□□ 1.01
VPS33A-205ENST00000541169 RGS20O76081 388 aa21.38■■□□□ 1.01
VPS33A-205ENST00000541169 EN2P19622 333 aaPredicted RBP21.38■■□□□ 1.01
VPS33A-205ENST00000541169 SOX10P56693 466 aa21.38■■□□□ 1.01
VPS33A-205ENST00000541169 LRRC41Q15345 812 aa21.38■■□□□ 1.01
VPS33A-205ENST00000541169 NECAB2Q7Z6G3 386 aa21.38■■□□□ 1.01
VPS33A-205ENST00000541169 SEZ6LQ9BYH1 1024 aa21.38■■□□□ 1.01
VPS33A-205ENST00000541169 FOXP1Q9H334 677 aaPredicted RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms