RNA–Protein interactions for RNA: ENST00000541029.1

ATN1-204, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 855 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-204ENST00000541029 NBPF20Q3BBV1 942 aa23.19■■□□□ 1.3
ATN1-204ENST00000541029 FAM47CQ5HY64 1035 aa23.19■■□□□ 1.3
ATN1-204ENST00000541029 RNF20Q5VTR2 975 aa23.19■■□□□ 1.3
ATN1-204ENST00000541029 C16orf59Q7L2K0 433 aa23.19■■□□□ 1.3
ATN1-204ENST00000541029 FCHSD1Q86WN1 690 aa23.19■■□□□ 1.3
ATN1-204ENST00000541029 SAMD3Q8N6K7 520 aa23.19■■□□□ 1.3
ATN1-204ENST00000541029 FAM161BQ96MY7 647 aa23.19■■□□□ 1.3
ATN1-204ENST00000541029 MRVI1Q9Y6F6 885 aa23.19■■□□□ 1.3
ATN1-204ENST00000541029 ACRP10323 421 aa23.18■■□□□ 1.3
ATN1-204ENST00000541029 LIFRP42702 1097 aa23.18■■□□□ 1.3
ATN1-204ENST00000541029 SMAD3P84022 425 aaKnown RBP23.18■■□□□ 1.3
ATN1-204ENST00000541029 ZNF697Q5TEC3 545 aa23.18■■□□□ 1.3
ATN1-204ENST00000541029 FAM109BQ6ICB4 259 aaPredicted RBP23.18■■□□□ 1.3
ATN1-204ENST00000541029 CMTR1Q8N1G2 835 aaKnown RBP23.18■■□□□ 1.3
ATN1-204ENST00000541029 RRP36Q96EU6 259 aaKnown RBP23.18■■□□□ 1.3
ATN1-204ENST00000541029 WNT8AQ9H1J5 351 aa23.18■■□□□ 1.3
ATN1-204ENST00000541029 DDX41Q9UJV9 622 aaKnown RBP23.18■■□□□ 1.3
ATN1-204ENST00000541029 KPNA6O60684 536 aa23.17■■□□□ 1.3
ATN1-204ENST00000541029 RGS20O76081 388 aa23.17■■□□□ 1.3
ATN1-204ENST00000541029 CCL23P55773 120 aa23.17■■□□□ 1.3
ATN1-204ENST00000541029 TMEM240Q5SV17 173 aa23.17■■□□□ 1.3
ATN1-204ENST00000541029 TMTC2Q8N394 836 aa23.17■■□□□ 1.3
ATN1-204ENST00000541029 SRBD1Q8N5C6 995 aaKnown RBP23.17■■□□□ 1.3
ATN1-204ENST00000541029 ZFP91Q96JP5 570 aaPredicted RBP23.17■■□□□ 1.3
ATN1-204ENST00000541029 SEC63Q9UGP8 760 aaKnown RBP23.17■■□□□ 1.3
ATN1-204ENST00000541029 CYP2C9P11712 490 aa23.16■■□□□ 1.3
ATN1-204ENST00000541029 CHMP4BP1P59074 171 aa23.16■■□□□ 1.3
ATN1-204ENST00000541029 PSRC1Q6PGN9 363 aaPredicted RBP23.16■■□□□ 1.3
ATN1-204ENST00000541029 MICU3Q86XE3 530 aa23.16■■□□□ 1.3
ATN1-204ENST00000541029 TCEANC2Q96MN5 208 aa23.16■■□□□ 1.3
ATN1-204ENST00000541029 GUCD1Q96NT3 240 aa23.16■■□□□ 1.3
ATN1-204ENST00000541029 LZTS2Q9BRK4 669 aa23.16■■□□□ 1.3
ATN1-204ENST00000541029 IL23AQ9NPF7 189 aa23.16■■□□□ 1.3
ATN1-204ENST00000541029 SLC12A7Q9Y666 1083 aa23.16■■□□□ 1.3
ATN1-204ENST00000541029 FRMPD4Q14CM0 1322 aa23.15■■□□□ 1.3
ATN1-204ENST00000541029 EYSQ5T1H1 3165 aa23.15■■□□□ 1.3
ATN1-204ENST00000541029 CALM1P0DP23 149 aa23.15■■□□□ 1.3
ATN1-204ENST00000541029 CALM2P0DP24 149 aa23.15■■□□□ 1.3
ATN1-204ENST00000541029 CALM3P0DP25 149 aa23.15■■□□□ 1.3
ATN1-204ENST00000541029 SMARCA1P28370 1054 aa23.15■■□□□ 1.3
ATN1-204ENST00000541029 CCND2P30279 289 aa23.15■■□□□ 1.3
ATN1-204ENST00000541029 GNAQP50148 359 aa23.15■■□□□ 1.3
ATN1-204ENST00000541029 NFRKBQ6P4R8 1299 aa23.15■■□□□ 1.3
ATN1-204ENST00000541029 VSIG10LQ86VR7 867 aa23.15■■□□□ 1.3
ATN1-204ENST00000541029 SGMS1Q86VZ5 419 aa23.15■■□□□ 1.3
ATN1-204ENST00000541029 RASEFQ8IZ41 740 aa23.15■■□□□ 1.3
ATN1-204ENST00000541029 NEK1Q96PY6 1258 aa23.15■■□□□ 1.3
ATN1-204ENST00000541029 SORBS3O60504 671 aa23.14■■□□□ 1.29
ATN1-204ENST00000541029 ADCK5Q3MIX3 580 aa23.14■■□□□ 1.29
ATN1-204ENST00000541029 TMTC3Q6ZXV5 915 aa23.14■■□□□ 1.29
ATN1-204ENST00000541029 ZNF365Q70YC5 407 aa23.14■■□□□ 1.29
ATN1-204ENST00000541029 GPKOWQ92917 476 aaPredicted RBP eCLIP23.14■■□□□ 1.29
ATN1-204ENST00000541029 EMID1Q96A84 441 aaPredicted RBP23.14■■□□□ 1.29
ATN1-204ENST00000541029 SCLYQ96I15 445 aa23.14■■□□□ 1.29
ATN1-204ENST00000541029 STXBP5LQ9Y2K9 1186 aa23.14■■□□□ 1.29
ATN1-204ENST00000541029 hCG_1642624A0A1W2PR95 340 aa23.13■■□□□ 1.29
ATN1-204ENST00000541029 SUPT20HL2P0C7V6 817 aa23.13■■□□□ 1.29
ATN1-204ENST00000541029 UBA1P22314 1058 aaKnown RBP23.13■■□□□ 1.29
ATN1-204ENST00000541029 RASIP1Q5U651 963 aa23.13■■□□□ 1.29
ATN1-204ENST00000541029 TET1Q8NFU7 2136 aa23.13■■□□□ 1.29
ATN1-204ENST00000541029 KAT2BQ92831 832 aa23.13■■□□□ 1.29
ATN1-204ENST00000541029 ZNF286BP0CG31 522 aa23.12■■□□□ 1.29
ATN1-204ENST00000541029 PTPN11Q06124 597 aaPredicted RBP23.12■■□□□ 1.29
ATN1-204ENST00000541029 LAMC2Q13753 1193 aa23.12■■□□□ 1.29
ATN1-204ENST00000541029 DGKDQ16760 1214 aa23.12■■□□□ 1.29
ATN1-204ENST00000541029 APOA5Q6Q788 366 aa23.12■■□□□ 1.29
ATN1-204ENST00000541029 USP17L6PQ6QN14 398 aa23.12■■□□□ 1.29
ATN1-204ENST00000541029 DHX37Q8IY37 1157 aaKnown RBP23.12■■□□□ 1.29
ATN1-204ENST00000541029 CCDC82Q8N4S0 544 aa23.12■■□□□ 1.29
ATN1-204ENST00000541029 FANCBQ8NB91 859 aa23.12■■□□□ 1.29
ATN1-204ENST00000541029 PPTC7Q8NI37 304 aa23.12■■□□□ 1.29
ATN1-204ENST00000541029 SMARCC2Q8TAQ2 1214 aa23.12■■□□□ 1.29
ATN1-204ENST00000541029 TTYH1Q9H313 450 aaPredicted RBP23.12■■□□□ 1.29
ATN1-204ENST00000541029 GGPS1O95749 300 aa23.11■■□□□ 1.29
ATN1-204ENST00000541029 CASTP20810 708 aaKnown RBP23.11■■□□□ 1.29
ATN1-204ENST00000541029 MRPS9P82933 396 aaKnown RBP23.11■■□□□ 1.29
ATN1-204ENST00000541029 EXOSC10Q01780 885 aaKnown RBP23.11■■□□□ 1.29
ATN1-204ENST00000541029 KCNV1Q6PIU1 500 aa23.11■■□□□ 1.29
ATN1-204ENST00000541029 CUL5Q93034 780 aa23.11■■□□□ 1.29
ATN1-204ENST00000541029 CNTNAP5Q8WYK1 1306 aa23.1■■□□□ 1.29
ATN1-204ENST00000541029 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.1■■□□□ 1.29
ATN1-204ENST00000541029 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.1■■□□□ 1.29
ATN1-204ENST00000541029 MEIS2O14770 477 aa23.1■■□□□ 1.29
ATN1-204ENST00000541029 DNAJB2P25686 324 aa23.1■■□□□ 1.29
ATN1-204ENST00000541029 SP2Q02086 613 aa23.1■■□□□ 1.29
ATN1-204ENST00000541029 TSGA10IPQ3SY00 556 aa23.1■■□□□ 1.29
ATN1-204ENST00000541029 CELF3Q5SZQ8 465 aaKnown RBP23.1■■□□□ 1.29
ATN1-204ENST00000541029 MYSM1Q5VVJ2 828 aa23.1■■□□□ 1.29
ATN1-204ENST00000541029 DHX32Q7L7V1 743 aaKnown RBP23.1■■□□□ 1.29
ATN1-204ENST00000541029 HERVK_113Q902F9 699 aa23.1■■□□□ 1.29
ATN1-204ENST00000541029 SEMA6BQ9H3T3 888 aa23.1■■□□□ 1.29
ATN1-204ENST00000541029 CXXC1Q9P0U4 656 aaPredicted RBP23.1■■□□□ 1.29
ATN1-204ENST00000541029 PTPRSQ13332 1948 aa23.1■■□□□ 1.29
ATN1-204ENST00000541029 MYO9BQ13459 2157 aa23.09■■□□□ 1.29
ATN1-204ENST00000541029 GRXCR1A8MXD5 290 aa23.09■■□□□ 1.29
ATN1-204ENST00000541029 PIK3CDO00329 1044 aa23.09■■□□□ 1.29
ATN1-204ENST00000541029 F2P00734 622 aa23.09■■□□□ 1.29
ATN1-204ENST00000541029 PSEN2P49810 448 aa23.09■■□□□ 1.29
ATN1-204ENST00000541029 KRT32Q14532 448 aa23.09■■□□□ 1.29
ATN1-204ENST00000541029 HSDL1Q3SXM5 330 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms