RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 TRIP12Q14669 1992 aaPredicted RBP15.09■□□□□ 0.01
LTBR-208ENST00000541005 STXBP3O00186 592 aa15.08■□□□□ 0
LTBR-208ENST00000541005 RGS20O76081 388 aa15.08■□□□□ 0
LTBR-208ENST00000541005 TXNP10599 105 aaKnown RBP15.08■□□□□ 0
LTBR-208ENST00000541005 CPT1AP50416 773 aa15.08■□□□□ 0
LTBR-208ENST00000541005 PFKFB3Q16875 520 aaPredicted RBP15.08■□□□□ 0
LTBR-208ENST00000541005 C8orf34Q49A92 452 aa15.08■□□□□ 0
LTBR-208ENST00000541005 TYW1BQ6NUM6 668 aa15.08■□□□□ 0
LTBR-208ENST00000541005 XRRA1Q6P2D8 792 aa15.08■□□□□ 0
LTBR-208ENST00000541005 KCNV1Q6PIU1 500 aa15.08■□□□□ 0
LTBR-208ENST00000541005 SEPT14Q6ZU15 432 aa15.08■□□□□ 0
LTBR-208ENST00000541005 ANKRD33Q7Z3H0 272 aa15.08■□□□□ 0
LTBR-208ENST00000541005 OR6J1Q8NGC5 347 aa15.08■□□□□ 0
LTBR-208ENST00000541005 SMARCC2Q8TAQ2 1214 aa15.08■□□□□ 0
LTBR-208ENST00000541005 EMID1Q96A84 441 aaPredicted RBP15.08■□□□□ 0
LTBR-208ENST00000541005 TOX2Q96NM4 488 aa15.08■□□□□ 0
LTBR-208ENST00000541005 PDRG1Q9NUG6 133 aa15.08■□□□□ 0
LTBR-208ENST00000541005 BARHL2Q9NY43 387 aa15.08■□□□□ 0
LTBR-208ENST00000541005 A0A0U1RQG5 324 aaPredicted RBP15.07■□□□□ 0
LTBR-208ENST00000541005 ESYT2A0FGR8 921 aa15.07■□□□□ 0
LTBR-208ENST00000541005 A6NJR5 290 aa15.07■□□□□ 0
LTBR-208ENST00000541005 PRPF3O43395 683 aaKnown RBP15.07■□□□□ 0
LTBR-208ENST00000541005 SEC24BO95487 1268 aa15.07■□□□□ 0
LTBR-208ENST00000541005 SCG2P13521 617 aa15.07■□□□□ 0
LTBR-208ENST00000541005 IFNAR1P17181 557 aa15.07■□□□□ 0
LTBR-208ENST00000541005 CDK7P50613 346 aa15.07■□□□□ 0
LTBR-208ENST00000541005 ARHGAP1Q07960 439 aa15.07■□□□□ 0
LTBR-208ENST00000541005 PCNX4Q63HM2 1172 aa15.07■□□□□ 0
LTBR-208ENST00000541005 CXCL17Q6UXB2 119 aa15.07■□□□□ 0
LTBR-208ENST00000541005 SLC43A3Q8NBI5 491 aa15.07■□□□□ 0
LTBR-208ENST00000541005 INPP4AQ96PE3 977 aaPredicted RBP15.07■□□□□ 0
LTBR-208ENST00000541005 RNF26Q9BY78 433 aaPredicted RBP15.07■□□□□ 0
LTBR-208ENST00000541005 SEZ6LQ9BYH1 1024 aa15.07■□□□□ 0
LTBR-208ENST00000541005 GLT8D2Q9H1C3 349 aa15.07■□□□□ 0
LTBR-208ENST00000541005 RIC8AQ9NPQ8 531 aa15.07■□□□□ 0
LTBR-208ENST00000541005 DDX41Q9UJV9 622 aaKnown RBP15.07■□□□□ 0
LTBR-208ENST00000541005 ZMYND8Q9ULU4 1186 aaPredicted RBP15.07■□□□□ 0
LTBR-208ENST00000541005 ATP11BQ9Y2G3 1177 aa15.07■□□□□ 0
LTBR-208ENST00000541005 MROH7Q68CQ1 1323 aa15.07■□□□□ 0
LTBR-208ENST00000541005 RANBP2P49792 3224 aaKnown RBP15.07■□□□□ 0
LTBR-208ENST00000541005 TANC1Q9C0D5 1861 aa15.06■□□□□ 0
LTBR-208ENST00000541005 KPNA6O60684 536 aa15.06■□□□□ 0
LTBR-208ENST00000541005 GH1P01241 217 aa15.06■□□□□ 0
LTBR-208ENST00000541005 TGFB3P10600 412 aa15.06■□□□□ 0
LTBR-208ENST00000541005 MYCLP12524 364 aaPredicted RBP15.06■□□□□ 0
LTBR-208ENST00000541005 ICAM3P32942 547 aa15.06■□□□□ 0
LTBR-208ENST00000541005 NAPAP54920 295 aa15.06■□□□□ 0
LTBR-208ENST00000541005 MRPS9P82933 396 aaKnown RBP15.06■□□□□ 0
LTBR-208ENST00000541005 PURAQ00577 322 aaKnown RBP15.06■□□□□ 0
LTBR-208ENST00000541005 TLE2Q04725 743 aa15.06■□□□□ 0
LTBR-208ENST00000541005 PKN1Q16512 942 aa15.06■□□□□ 0
LTBR-208ENST00000541005 BRDTQ58F21 947 aaPredicted RBP15.06■□□□□ 0
LTBR-208ENST00000541005 COPS5Q92905 334 aa15.06■□□□□ 0
LTBR-208ENST00000541005 GDF15Q99988 308 aa15.06■□□□□ 0
LTBR-208ENST00000541005 PDLIM7Q9NR12 457 aa15.06■□□□□ 0
LTBR-208ENST00000541005 POLR3EQ9NVU0 708 aa15.06■□□□□ 0
LTBR-208ENST00000541005 MRVI1Q9Y6F6 885 aa15.06■□□□□ 0
LTBR-208ENST00000541005 ARVCFO00192 962 aa15.05■□□□□ -0
LTBR-208ENST00000541005 HOXD8P13378 290 aaPredicted RBP15.05■□□□□ -0
LTBR-208ENST00000541005 BMP8BP34820 402 aa15.05■□□□□ -0
LTBR-208ENST00000541005 ADCY7P51828 1080 aa15.05■□□□□ -0
LTBR-208ENST00000541005 UBE2SQ16763 222 aa15.05■□□□□ -0
LTBR-208ENST00000541005 LY6KQ17RY6 165 aa15.05■□□□□ -0
LTBR-208ENST00000541005 GNPTABQ3T906 1256 aa15.05■□□□□ -0
LTBR-208ENST00000541005 CHRDL2Q6WN34 429 aa15.05■□□□□ -0
LTBR-208ENST00000541005 NCOA5Q9HCD5 579 aaKnown RBP15.05■□□□□ -0
LTBR-208ENST00000541005 COLQQ9Y215 455 aaPredicted RBP15.05■□□□□ -0
LTBR-208ENST00000541005 MYH9P35579 1960 aaKnown RBP15.04■□□□□ -0
LTBR-208ENST00000541005 GRIN2DO15399 1336 aa15.04■□□□□ -0
LTBR-208ENST00000541005 A0A1W2PPC1 479 aa15.04■□□□□ -0
LTBR-208ENST00000541005 SPDYE3A6NKU9 549 aa15.04■□□□□ -0
LTBR-208ENST00000541005 KIAA0355O15063 1070 aa15.04■□□□□ -0
LTBR-208ENST00000541005 PQBP1O60828 265 aaKnown RBP15.04■□□□□ -0
LTBR-208ENST00000541005 MMP3P08254 477 aa15.04■□□□□ -0
LTBR-208ENST00000541005 CLTBP09497 229 aa15.04■□□□□ -0
LTBR-208ENST00000541005 SYN1P17600 705 aa15.04■□□□□ -0
LTBR-208ENST00000541005 UBA1P22314 1058 aaKnown RBP15.04■□□□□ -0
LTBR-208ENST00000541005 CLK2P49760 499 aaKnown RBP15.04■□□□□ -0
LTBR-208ENST00000541005 CCT2P78371 535 aaKnown RBP15.04■□□□□ -0
LTBR-208ENST00000541005 AP3B2Q13367 1082 aa15.04■□□□□ -0
LTBR-208ENST00000541005 ANKRD1Q15327 319 aa15.04■□□□□ -0
LTBR-208ENST00000541005 FAM126BQ8IXS8 530 aa15.04■□□□□ -0
LTBR-208ENST00000541005 PPTC7Q8NI37 304 aa15.04■□□□□ -0
LTBR-208ENST00000541005 CCDC12Q8WUD4 166 aaPredicted RBP15.04■□□□□ -0
LTBR-208ENST00000541005 PHKBQ93100 1093 aa15.04■□□□□ -0
LTBR-208ENST00000541005 MTG1Q9BT17 334 aaPredicted RBP15.04■□□□□ -0
LTBR-208ENST00000541005 ZMYND12Q9H0C1 365 aa15.04■□□□□ -0
LTBR-208ENST00000541005 SMCO2A6NFE2 343 aa15.03■□□□□ -0
LTBR-208ENST00000541005 DCDC2CA8MYV0 355 aa15.03■□□□□ -0
LTBR-208ENST00000541005 SPATA31C2B4DYI2 1134 aa15.03■□□□□ -0
LTBR-208ENST00000541005 FIBPO43427 364 aa15.03■□□□□ -0
LTBR-208ENST00000541005 FOSP01100 380 aaPredicted RBP15.03■□□□□ -0
LTBR-208ENST00000541005 MAGEA10P43363 369 aaPredicted RBP15.03■□□□□ -0
LTBR-208ENST00000541005 FAAP100Q0VG06 881 aa15.03■□□□□ -0
LTBR-208ENST00000541005 SEMA3FQ13275 785 aa15.03■□□□□ -0
LTBR-208ENST00000541005 ITGA7Q13683 1181 aa15.03■□□□□ -0
LTBR-208ENST00000541005 LAMC2Q13753 1193 aa15.03■□□□□ -0
LTBR-208ENST00000541005 CELF3Q5SZQ8 465 aaKnown RBP15.03■□□□□ -0
LTBR-208ENST00000541005 MYSM1Q5VVJ2 828 aa15.03■□□□□ -0
LTBR-208ENST00000541005 FAM177A1Q8N128 213 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms