RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 PFKFB3Q16875 520 aaPredicted RBP10.61□□□□□ -0.71
SNHG1-215ENST00000540904 PRPF38BQ5VTL8 546 aaKnown RBP10.61□□□□□ -0.71
SNHG1-215ENST00000540904 CCSAPQ6IQ19 270 aaPredicted RBP10.61□□□□□ -0.71
SNHG1-215ENST00000540904 TYW1BQ6NUM6 668 aa10.61□□□□□ -0.71
SNHG1-215ENST00000540904 SLC39A5Q6ZMH5 540 aa10.61□□□□□ -0.71
SNHG1-215ENST00000540904 VSIG10LQ86VR7 867 aa10.61□□□□□ -0.71
SNHG1-215ENST00000540904 PCSK9Q8NBP7 692 aaKnown RBP10.61□□□□□ -0.71
SNHG1-215ENST00000540904 OR6J1Q8NGC5 347 aa10.61□□□□□ -0.71
SNHG1-215ENST00000540904 VTI1AQ96AJ9 217 aa10.61□□□□□ -0.71
SNHG1-215ENST00000540904 IL17RAQ96F46 866 aa10.61□□□□□ -0.71
SNHG1-215ENST00000540904 TSEN34Q9BSV6 310 aaKnown RBP10.61□□□□□ -0.71
SNHG1-215ENST00000540904 SLC26A6Q9BXS9 759 aa10.61□□□□□ -0.71
SNHG1-215ENST00000540904 RBM27Q9P2N5 1060 aaKnown RBP10.61□□□□□ -0.71
SNHG1-215ENST00000540904 TPCN1Q9ULQ1 816 aa10.61□□□□□ -0.71
SNHG1-215ENST00000540904 SSUH2Q9Y2M2 353 aa10.61□□□□□ -0.71
SNHG1-215ENST00000540904 Q9Y3F1 56 aa10.61□□□□□ -0.71
SNHG1-215ENST00000540904 TNRC18O15417 2968 aaPredicted RBP10.6□□□□□ -0.71
SNHG1-215ENST00000540904 MCM3APO60318 1980 aa10.6□□□□□ -0.71
SNHG1-215ENST00000540904 SMCO2A6NFE2 343 aa10.6□□□□□ -0.71
SNHG1-215ENST00000540904 SPDYE3A6NKU9 549 aa10.6□□□□□ -0.71
SNHG1-215ENST00000540904 hCG_1984214I3L0E3 225 aa10.6□□□□□ -0.71
SNHG1-215ENST00000540904 NKRFO15226 690 aaKnown RBP eCLIP10.6□□□□□ -0.71
SNHG1-215ENST00000540904 PRPF3O43395 683 aaKnown RBP10.6□□□□□ -0.71
SNHG1-215ENST00000540904 ARIH2O95376 493 aa10.6□□□□□ -0.71
SNHG1-215ENST00000540904 IFNAR1P17181 557 aa10.6□□□□□ -0.71
SNHG1-215ENST00000540904 ADCY7P51828 1080 aa10.6□□□□□ -0.71
SNHG1-215ENST00000540904 NKX3-2P78367 333 aa10.6□□□□□ -0.71
SNHG1-215ENST00000540904 PKN1Q16512 942 aa10.6□□□□□ -0.71
SNHG1-215ENST00000540904 LY6KQ17RY6 165 aa10.6□□□□□ -0.71
SNHG1-215ENST00000540904 PPP1R18Q6NYC8 613 aa10.6□□□□□ -0.71
SNHG1-215ENST00000540904 CCDC62Q6P9F0 684 aa10.6□□□□□ -0.71
SNHG1-215ENST00000540904 CPLX2Q6PUV4 134 aaKnown RBP10.6□□□□□ -0.71
SNHG1-215ENST00000540904 ZNF713Q8N859 430 aaPredicted RBP10.6□□□□□ -0.71
SNHG1-215ENST00000540904 COPS5Q92905 334 aa10.6□□□□□ -0.71
SNHG1-215ENST00000540904 GLT1D1Q96MS3 346 aa10.6□□□□□ -0.71
SNHG1-215ENST00000540904 RNF26Q9BY78 433 aaPredicted RBP10.6□□□□□ -0.71
SNHG1-215ENST00000540904 ALDH8A1Q9H2A2 487 aaPredicted RBP10.6□□□□□ -0.71
SNHG1-215ENST00000540904 SLKQ9H2G2 1235 aaPredicted RBP10.6□□□□□ -0.71
SNHG1-215ENST00000540904 RIC8AQ9NPQ8 531 aa10.6□□□□□ -0.71
SNHG1-215ENST00000540904 STARD7Q9NQZ5 370 aa10.6□□□□□ -0.71
SNHG1-215ENST00000540904 ATP11BQ9Y2G3 1177 aa10.6□□□□□ -0.71
SNHG1-215ENST00000540904 MRVI1Q9Y6F6 885 aa10.6□□□□□ -0.71
SNHG1-215ENST00000540904 FRMPD4Q14CM0 1322 aa10.59□□□□□ -0.71
SNHG1-215ENST00000540904 FRMPD3Q5JV73 1810 aa10.59□□□□□ -0.71
SNHG1-215ENST00000540904 MYH6P13533 1939 aa10.59□□□□□ -0.71
SNHG1-215ENST00000540904 ZEB2O60315 1214 aa10.59□□□□□ -0.71
SNHG1-215ENST00000540904 RGS20O76081 388 aa10.59□□□□□ -0.71
SNHG1-215ENST00000540904 RTP1P59025 263 aa10.59□□□□□ -0.71
SNHG1-215ENST00000540904 MRPS9P82933 396 aaKnown RBP10.59□□□□□ -0.71
SNHG1-215ENST00000540904 SSRP1Q08945 709 aaKnown RBP10.59□□□□□ -0.71
SNHG1-215ENST00000540904 SCRN1Q12765 414 aa10.59□□□□□ -0.71
SNHG1-215ENST00000540904 TRIM60Q495X7 471 aa10.59□□□□□ -0.71
SNHG1-215ENST00000540904 CXCL17Q6UXB2 119 aa10.59□□□□□ -0.71
SNHG1-215ENST00000540904 TRIM22Q8IYM9 498 aa10.59□□□□□ -0.71
SNHG1-215ENST00000540904 C22orf23Q9BZE7 217 aa10.59□□□□□ -0.71
SNHG1-215ENST00000540904 RTEL1Q9NZ71 1219 aa10.59□□□□□ -0.71
SNHG1-215ENST00000540904 ZMYND8Q9ULU4 1186 aaPredicted RBP10.59□□□□□ -0.71
SNHG1-215ENST00000540904 PCDHA6Q9UN73 950 aa10.59□□□□□ -0.71
SNHG1-215ENST00000540904 PCDHA8Q9Y5H6 950 aa10.59□□□□□ -0.71
SNHG1-215ENST00000540904 LRRC37A2A6NM11 1700 aa10.58□□□□□ -0.72
SNHG1-215ENST00000540904 SORBS3O60504 671 aa10.58□□□□□ -0.72
SNHG1-215ENST00000540904 PFKFB2O60825 505 aa10.58□□□□□ -0.72
SNHG1-215ENST00000540904 GH1P01241 217 aa10.58□□□□□ -0.72
SNHG1-215ENST00000540904 SYN1P17600 705 aa10.58□□□□□ -0.72
SNHG1-215ENST00000540904 CPT1AP50416 773 aa10.58□□□□□ -0.72
SNHG1-215ENST00000540904 BRDTQ58F21 947 aaPredicted RBP10.58□□□□□ -0.72
SNHG1-215ENST00000540904 PCNX4Q63HM2 1172 aa10.58□□□□□ -0.72
SNHG1-215ENST00000540904 CCDC12Q8WUD4 166 aaPredicted RBP10.58□□□□□ -0.72
SNHG1-215ENST00000540904 PGBD1Q96JS3 809 aa10.58□□□□□ -0.72
SNHG1-215ENST00000540904 GLT8D2Q9H1C3 349 aa10.58□□□□□ -0.72
SNHG1-215ENST00000540904 UPF2Q9HAU5 1272 aaKnown RBP10.58□□□□□ -0.72
SNHG1-215ENST00000540904 TMEM260Q9NX78 707 aa10.58□□□□□ -0.72
SNHG1-215ENST00000540904 VPS54Q9P1Q0 977 aa10.58□□□□□ -0.72
SNHG1-215ENST00000540904 DDX41Q9UJV9 622 aaKnown RBP10.58□□□□□ -0.72
SNHG1-215ENST00000540904 ELP1O95163 1332 aa10.58□□□□□ -0.72
SNHG1-215ENST00000540904 A0A0U1RQG5 324 aaPredicted RBP10.57□□□□□ -0.72
SNHG1-215ENST00000540904 ESYT2A0FGR8 921 aa10.57□□□□□ -0.72
SNHG1-215ENST00000540904 A6NJR5 290 aa10.57□□□□□ -0.72
SNHG1-215ENST00000540904 PQBP1O60828 265 aaKnown RBP10.57□□□□□ -0.72
SNHG1-215ENST00000540904 DTNBO60941 627 aa10.57□□□□□ -0.72
SNHG1-215ENST00000540904 STAM2O75886 525 aa10.57□□□□□ -0.72
SNHG1-215ENST00000540904 CABYRO75952 493 aa10.57□□□□□ -0.72
SNHG1-215ENST00000540904 CDKL5O76039 1030 aa10.57□□□□□ -0.72
SNHG1-215ENST00000540904 MYL3P08590 195 aa10.57□□□□□ -0.72
SNHG1-215ENST00000540904 TGFB3P10600 412 aa10.57□□□□□ -0.72
SNHG1-215ENST00000540904 SP2Q02086 613 aa10.57□□□□□ -0.72
SNHG1-215ENST00000540904 TLE2Q04725 743 aa10.57□□□□□ -0.72
SNHG1-215ENST00000540904 ARHGAP1Q07960 439 aa10.57□□□□□ -0.72
SNHG1-215ENST00000540904 SNX17Q15036 470 aa10.57□□□□□ -0.72
SNHG1-215ENST00000540904 GNPTABQ3T906 1256 aa10.57□□□□□ -0.72
SNHG1-215ENST00000540904 C1orf53Q5VUE5 145 aa10.57□□□□□ -0.72
SNHG1-215ENST00000540904 JAKMIP3Q5VZ66 844 aa10.57□□□□□ -0.72
SNHG1-215ENST00000540904 XRRA1Q6P2D8 792 aa10.57□□□□□ -0.72
SNHG1-215ENST00000540904 KCNV1Q6PIU1 500 aa10.57□□□□□ -0.72
SNHG1-215ENST00000540904 TEX2Q8IWB9 1127 aa10.57□□□□□ -0.72
SNHG1-215ENST00000540904 DHX37Q8IY37 1157 aaKnown RBP10.57□□□□□ -0.72
SNHG1-215ENST00000540904 NECAB1Q8N987 351 aa10.57□□□□□ -0.72
SNHG1-215ENST00000540904 AFG1LQ8WV93 481 aa10.57□□□□□ -0.72
SNHG1-215ENST00000540904 INPP4AQ96PE3 977 aaPredicted RBP10.57□□□□□ -0.72
SNHG1-215ENST00000540904 KIF2CQ99661 725 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms