RNA–Protein interactions for RNA: ENST00000540430.5

LDHA-218, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 2,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-218ENST00000540430 EPHB4P54760 987 aa10.4□□□□□ -0.74
LDHA-218ENST00000540430 NAP1L1P55209 391 aaKnown RBP10.4□□□□□ -0.74
LDHA-218ENST00000540430 NNTQ13423 1086 aa10.4□□□□□ -0.74
LDHA-218ENST00000540430 CCDC40Q4G0X9 1142 aa10.4□□□□□ -0.74
LDHA-218ENST00000540430 LRRC24Q50LG9 513 aa10.4□□□□□ -0.74
LDHA-218ENST00000540430 CAVIN4Q5BKX8 364 aa10.4□□□□□ -0.74
LDHA-218ENST00000540430 METTL24Q5JXM2 366 aa10.4□□□□□ -0.74
LDHA-218ENST00000540430 KDM7AQ6ZMT4 941 aa10.4□□□□□ -0.74
LDHA-218ENST00000540430 IQCA1Q86XH1 822 aa10.4□□□□□ -0.74
LDHA-218ENST00000540430 STK11IPQ8N1F8 1099 aa10.4□□□□□ -0.74
LDHA-218ENST00000540430 C1orf131Q8NDD1 294 aaKnown RBP10.4□□□□□ -0.74
LDHA-218ENST00000540430 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.4□□□□□ -0.74
LDHA-218ENST00000540430 N4BP2L2Q92802 583 aaPredicted RBP10.4□□□□□ -0.74
LDHA-218ENST00000540430 JAKMIP2Q96AA8 810 aa10.4□□□□□ -0.74
LDHA-218ENST00000540430 CLMNQ96JQ2 1002 aa10.4□□□□□ -0.74
LDHA-218ENST00000540430 SLF1Q9BQI6 1058 aa10.4□□□□□ -0.74
LDHA-218ENST00000540430 EHD4Q9H223 541 aa10.4□□□□□ -0.74
LDHA-218ENST00000540430 ACTR5Q9H9F9 607 aaPredicted RBP10.4□□□□□ -0.74
LDHA-218ENST00000540430 ZNF70Q9UC06 446 aaPredicted RBP10.4□□□□□ -0.74
LDHA-218ENST00000540430 SAMM50Q9Y512 469 aa10.4□□□□□ -0.74
LDHA-218ENST00000540430 MYO5AQ9Y4I1 1855 aaKnown RBP10.4□□□□□ -0.75
LDHA-218ENST00000540430 STK36Q9NRP7 1315 aa10.4□□□□□ -0.75
LDHA-218ENST00000540430 FKTNO75072 461 aa10.39□□□□□ -0.75
LDHA-218ENST00000540430 USP2O75604 605 aaPredicted RBP10.39□□□□□ -0.75
LDHA-218ENST00000540430 CDR1P51861 262 aa10.39□□□□□ -0.75
LDHA-218ENST00000540430 ANTXR2P58335 489 aa10.39□□□□□ -0.75
LDHA-218ENST00000540430 KRT83P78385 493 aa10.39□□□□□ -0.75
LDHA-218ENST00000540430 CEP85LQ5SZL2 805 aa10.39□□□□□ -0.75
LDHA-218ENST00000540430 RALYLQ86SE5 291 aaKnown RBP10.39□□□□□ -0.75
LDHA-218ENST00000540430 IFNL1Q8IU54 200 aa10.39□□□□□ -0.75
LDHA-218ENST00000540430 ANKRD13AQ8IZ07 590 aa10.39□□□□□ -0.75
LDHA-218ENST00000540430 VGLL2Q8N8G2 317 aa10.39□□□□□ -0.75
LDHA-218ENST00000540430 C3orf20Q8ND61 904 aa10.39□□□□□ -0.75
LDHA-218ENST00000540430 CAVIN3Q969G5 261 aa10.39□□□□□ -0.75
LDHA-218ENST00000540430 GSDMAQ96QA5 445 aa10.39□□□□□ -0.75
LDHA-218ENST00000540430 RUFY1Q96T51 708 aa10.39□□□□□ -0.75
LDHA-218ENST00000540430 GUCA1BQ9UMX6 200 aa10.39□□□□□ -0.75
LDHA-218ENST00000540430 REXO2Q9Y3B8 237 aaKnown RBP10.39□□□□□ -0.75
LDHA-218ENST00000540430 KRT86O43790 486 aa10.39□□□□□ -0.75
LDHA-218ENST00000540430 CRKP46108 304 aa10.39□□□□□ -0.75
LDHA-218ENST00000540430 SOX10P56693 466 aa10.39□□□□□ -0.75
LDHA-218ENST00000540430 SARNPP82979 210 aaKnown RBP10.39□□□□□ -0.75
LDHA-218ENST00000540430 HDLBPQ00341 1268 aaKnown RBP10.39□□□□□ -0.75
LDHA-218ENST00000540430 RILPL1Q5EBL4 403 aa10.39□□□□□ -0.75
LDHA-218ENST00000540430 TAX1BP1Q86VP1 789 aa10.39□□□□□ -0.75
LDHA-218ENST00000540430 NOSTRINQ8IVI9 506 aa10.39□□□□□ -0.75
LDHA-218ENST00000540430 NUP88Q99567 741 aaPredicted RBP10.39□□□□□ -0.75
LDHA-218ENST00000540430 TDRD3Q9H7E2 651 aaKnown RBP10.39□□□□□ -0.75
LDHA-218ENST00000540430 CD248Q9HCU0 757 aa10.39□□□□□ -0.75
LDHA-218ENST00000540430 SRPRBQ9Y5M8 271 aaKnown RBP10.39□□□□□ -0.75
LDHA-218ENST00000540430 A0A1B0GUA9 196 aa10.38□□□□□ -0.75
LDHA-218ENST00000540430 GOLGA6L7A0A1B0GV03 622 aa10.38□□□□□ -0.75
LDHA-218ENST00000540430 HSF2BPO75031 334 aa10.38□□□□□ -0.75
LDHA-218ENST00000540430 KRT9P35527 623 aa10.38□□□□□ -0.75
LDHA-218ENST00000540430 TNNI2P48788 182 aa10.38□□□□□ -0.75
LDHA-218ENST00000540430 METAP2P50579 478 aaKnown RBP eCLIP10.38□□□□□ -0.755e-10■■□□□ 11.5
LDHA-218ENST00000540430 NAA35Q5VZE5 725 aa10.38□□□□□ -0.75
LDHA-218ENST00000540430 FBXO46Q6PJ61 603 aaPredicted RBP10.38□□□□□ -0.75
LDHA-218ENST00000540430 SND1Q7KZF4 910 aaKnown RBP eCLIP10.38□□□□□ -0.752e-19■■■■□ 22.8
LDHA-218ENST00000540430 ITFG2Q969R8 447 aa10.38□□□□□ -0.75
LDHA-218ENST00000540430 PLCD4Q9BRC7 762 aa10.38□□□□□ -0.75
LDHA-218ENST00000540430 R3HDMLQ9H3Y0 253 aa10.38□□□□□ -0.75
LDHA-218ENST00000540430 HDAC6Q9UBN7 1215 aa10.38□□□□□ -0.75
LDHA-218ENST00000540430 CEP131Q9UPN4 1083 aa10.38□□□□□ -0.75
LDHA-218ENST00000540430 ENC1O14682 589 aa10.38□□□□□ -0.75
LDHA-218ENST00000540430 N4BP3O15049 544 aa10.38□□□□□ -0.75
LDHA-218ENST00000540430 ZFYP08048 801 aaPredicted RBP10.38□□□□□ -0.75
LDHA-218ENST00000540430 PRLRP16471 622 aa10.38□□□□□ -0.75
LDHA-218ENST00000540430 LSP1P33241 339 aa10.38□□□□□ -0.75
LDHA-218ENST00000540430 PUM3Q15397 648 aaKnown RBP10.38□□□□□ -0.75
LDHA-218ENST00000540430 TTMPQ5BVD1 217 aa10.38□□□□□ -0.75
LDHA-218ENST00000540430 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.38□□□□□ -0.75
LDHA-218ENST00000540430 SH3RF1Q7Z6J0 888 aa10.38□□□□□ -0.75
LDHA-218ENST00000540430 CCDC13Q8IYE1 715 aa10.38□□□□□ -0.75
LDHA-218ENST00000540430 CAGE1Q8TC20 777 aa10.38□□□□□ -0.75
LDHA-218ENST00000540430 CALR3Q96L12 384 aaKnown RBP10.38□□□□□ -0.75
LDHA-218ENST00000540430 GDAP1L1Q96MZ0 367 aa10.38□□□□□ -0.75
LDHA-218ENST00000540430 TEPSINQ96N21 525 aa10.38□□□□□ -0.75
LDHA-218ENST00000540430 DNAJC7Q99615 494 aa10.38□□□□□ -0.75
LDHA-218ENST00000540430 HTTP42858 3142 aa10.37□□□□□ -0.75
LDHA-218ENST00000540430 M0R2C6 588 aa10.37□□□□□ -0.75
LDHA-218ENST00000540430 IGF2BP3O00425 579 aaKnown RBP eCLIP10.37□□□□□ -0.752e-7■■■■■ 37.3
LDHA-218ENST00000540430 EZRP15311 586 aaKnown RBP10.37□□□□□ -0.75
LDHA-218ENST00000540430 SLC8A1P32418 973 aa10.37□□□□□ -0.75
LDHA-218ENST00000540430 IFFO1Q0D2I5 559 aa10.37□□□□□ -0.75
LDHA-218ENST00000540430 PDCLQ13371 301 aa10.37□□□□□ -0.75
LDHA-218ENST00000540430 KRT31Q15323 416 aa10.37□□□□□ -0.75
LDHA-218ENST00000540430 SNCBQ16143 134 aa10.37□□□□□ -0.75
LDHA-218ENST00000540430 CCDC122Q5T0U0 273 aa10.37□□□□□ -0.75
LDHA-218ENST00000540430 NAIF1Q69YI7 327 aaPredicted RBP10.37□□□□□ -0.75
LDHA-218ENST00000540430 OR8K1Q8NGG5 319 aa10.37□□□□□ -0.75
LDHA-218ENST00000540430 WASF1Q92558 559 aa10.37□□□□□ -0.75
LDHA-218ENST00000540430 TEKT1Q969V4 418 aa10.37□□□□□ -0.75
LDHA-218ENST00000540430 BORCS6Q96GS4 357 aa10.37□□□□□ -0.75
LDHA-218ENST00000540430 AIFM3Q96NN9 605 aa10.37□□□□□ -0.75
LDHA-218ENST00000540430 MRIQ9BWK5 157 aa10.37□□□□□ -0.75
LDHA-218ENST00000540430 TRIM6Q9C030 488 aaPredicted RBP10.37□□□□□ -0.75
LDHA-218ENST00000540430 SUGT1Q9Y2Z0 365 aa10.37□□□□□ -0.75
LDHA-218ENST00000540430 OTOFQ9HC10 1997 aa10.37□□□□□ -0.75
LDHA-218ENST00000540430 PPP1R3GB7ZBB8 358 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms