RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 LTV1Q96GA3 475 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-211ENST00000539921 ZIM3Q96PE6 472 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 GBP5Q96PP8 586 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 TMEM237Q96Q45 408 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 SYT15Q9BQS2 421 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 SPATA16Q9BXB7 569 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 ZSWIM4Q9H7M6 989 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 C1orf115Q9H7X2 142 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 PARVBQ9HBI1 364 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 TMBIM4Q9HC24 238 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 INTS13Q9NVM9 706 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 HOXC10Q9NYD6 342 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 IL20Q9NYY1 176 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 SAP30BPQ9UHR5 308 aaKnown RBP6.73□□□□□ -1.33
SNHG1-211ENST00000539921 TSKSQ9UJT2 592 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 PCDHB2Q9Y5E7 798 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 SLC30A1Q9Y6M5 507 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 CAMSAP1Q5T5Y3 1602 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 A0A0G2JS52 829 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 UNCXA6NJT0 531 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 H3BQV1 296 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 MATN2O00339 956 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 GFPT2O94808 682 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 ASLP04424 464 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 ITGA2BP08514 1039 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 KCNA2P16389 499 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 PTPN2P17706 415 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 EIF2S2P20042 333 aaKnown RBP6.72□□□□□ -1.33
SNHG1-211ENST00000539921 LMOD1P29536 600 aaPredicted RBP6.72□□□□□ -1.33
SNHG1-211ENST00000539921 PCK1P35558 622 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 MSH2P43246 934 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 PEX5P50542 639 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 HDGFP51858 240 aaKnown RBP6.72□□□□□ -1.33
SNHG1-211ENST00000539921 PMS2P54278 862 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 MTTPP55157 894 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 EIF3BP55884 814 aaKnown RBP6.72□□□□□ -1.33
SNHG1-211ENST00000539921 POLE2P56282 527 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 TUBA1BP68363 451 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 KRT83P78385 493 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 HPCAP84074 193 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 GUCY1A3Q02108 690 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 PDE4BQ07343 736 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 MTX1Q13505 466 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 NR1I3Q14994 352 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 NECTIN1Q15223 517 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 IFFO2Q5TF58 517 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 NT5DC1Q5TFE4 455 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 FAAH2Q6GMR7 532 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 ASTLQ6HA08 431 aaPredicted RBP6.72□□□□□ -1.33
SNHG1-211ENST00000539921 TMEM53Q6P2H8 277 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 TMEM154Q6P9G4 183 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 LARP1Q6PKG0 1096 aaKnown RBP6.72□□□□□ -1.33
SNHG1-211ENST00000539921 TUBA1AQ71U36 451 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 ASRGL1Q7L266 308 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 TRPM8Q7Z2W7 1104 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 PHLDB2Q86SQ0 1253 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 HOOK3Q86VS8 718 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 DZIP1Q86YF9 867 aaKnown RBP6.72□□□□□ -1.33
SNHG1-211ENST00000539921 PDILTQ8N807 584 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 RBBP8NLQ8NC74 664 aaPredicted RBP6.72□□□□□ -1.33
SNHG1-211ENST00000539921 PIP4K2CQ8TBX8 421 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 RBM46Q8TBY0 533 aaKnown RBP6.72□□□□□ -1.33
SNHG1-211ENST00000539921 NEK9Q8TD19 979 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 ASAP3Q8TDY4 903 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 STK32AQ8WU08 396 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 DNAJC9Q8WXX5 260 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 CTNNBL1Q8WYA6 563 aaPredicted RBP6.72□□□□□ -1.33
SNHG1-211ENST00000539921 ARL8AQ96BM9 186 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 CDK5RAP3Q96JB5 506 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 CLMNQ96JQ2 1002 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 PURBQ96QR8 312 aaKnown RBP6.72□□□□□ -1.33
SNHG1-211ENST00000539921 TAOK3Q9H2K8 898 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 GDF3Q9NR23 364 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 FANCLQ9NW38 375 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 ADAM22Q9P0K1 906 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 KIAA1522Q9P206 1035 aaPredicted RBP6.72□□□□□ -1.33
SNHG1-211ENST00000539921 STOML1Q9UBI4 398 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 EFR3BQ9Y2G0 817 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 R3HDM2Q9Y2K5 976 aaKnown RBP6.72□□□□□ -1.33
SNHG1-211ENST00000539921 CHMP3Q9Y3E7 222 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 MED1Q15648 1581 aaPredicted RBP6.72□□□□□ -1.33
SNHG1-211ENST00000539921 UGGT1Q9NYU2 1555 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 ZMYM6O95789 1325 aa6.72□□□□□ -1.33
SNHG1-211ENST00000539921 NEXMIFQ5QGS0 1516 aa6.71□□□□□ -1.33
SNHG1-211ENST00000539921 DIP2AQ14689 1571 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 A0A1B0GVG6 124 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 KANSL1LA0AUZ9 987 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 BICDL2A1A5D9 508 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 SPDYE5A6NIY4 337 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 ZNF233A6NK53 670 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 GCOM1H8Y6P7 765 aaPredicted RBP6.71□□□□□ -1.34
SNHG1-211ENST00000539921 KRT86O43790 486 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 TJP3O95049 919 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 CHGBP05060 677 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 MYZAPP0CAP1 466 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 PABPC4LP0CB38 370 aaKnown RBP6.71□□□□□ -1.34
SNHG1-211ENST00000539921 POTEJP0CG39 1038 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 ATP1A3P13637 1013 aa6.71□□□□□ -1.34
SNHG1-211ENST00000539921 RPL17P18621 184 aaKnown RBP6.71□□□□□ -1.34
SNHG1-211ENST00000539921 RPS6KB1P23443 525 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms