RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 RASA1P20936 1047 aa8.62□□□□□ -1.03
CCDC60-204ENST00000539847 CRKP46108 304 aa8.62□□□□□ -1.03
CCDC60-204ENST00000539847 SARSP49591 514 aaKnown RBP8.62□□□□□ -1.03
CCDC60-204ENST00000539847 CAP1Q01518 475 aa8.62□□□□□ -1.03
CCDC60-204ENST00000539847 PPIL2Q13356 520 aa8.62□□□□□ -1.03
CCDC60-204ENST00000539847 WHAMMP3Q1A5X7 153 aa8.62□□□□□ -1.03
CCDC60-204ENST00000539847 SLC4A8Q2Y0W8 1093 aa8.62□□□□□ -1.03
CCDC60-204ENST00000539847 TAF7LQ5H9L4 462 aa8.62□□□□□ -1.03
CCDC60-204ENST00000539847 PDXDC2PQ6P474 469 aa8.62□□□□□ -1.03
CCDC60-204ENST00000539847 CPLX2Q6PUV4 134 aaKnown RBP8.62□□□□□ -1.03
CCDC60-204ENST00000539847 THSD4Q6ZMP0 1018 aa8.62□□□□□ -1.03
CCDC60-204ENST00000539847 FBXO33Q7Z6M2 555 aa8.62□□□□□ -1.03
CCDC60-204ENST00000539847 LRRN4CLQ8ND94 238 aa8.62□□□□□ -1.03
CCDC60-204ENST00000539847 CTCFLQ8NI51 663 aaPredicted RBP8.62□□□□□ -1.03
CCDC60-204ENST00000539847 FAM71BQ8TC56 605 aa8.62□□□□□ -1.03
CCDC60-204ENST00000539847 CCDC34Q96HJ3 373 aa8.62□□□□□ -1.03
CCDC60-204ENST00000539847 FAM84BQ96KN1 310 aaPredicted RBP8.62□□□□□ -1.03
CCDC60-204ENST00000539847 TDRD3Q9H7E2 651 aaKnown RBP8.62□□□□□ -1.03
CCDC60-204ENST00000539847 CNNM1Q9NRU3 951 aa8.62□□□□□ -1.03
CCDC60-204ENST00000539847 TLR7Q9NYK1 1049 aaKnown RBP8.62□□□□□ -1.03
CCDC60-204ENST00000539847 TMOD2Q9NZR1 351 aa8.62□□□□□ -1.03
CCDC60-204ENST00000539847 CEP126Q9P2H0 1117 aa8.62□□□□□ -1.03
CCDC60-204ENST00000539847 PCDHAC2Q9Y5I4 1007 aa8.62□□□□□ -1.03
CCDC60-204ENST00000539847 CLIC4Q9Y696 253 aa8.62□□□□□ -1.03
CCDC60-204ENST00000539847 RANBP2P49792 3224 aaKnown RBP8.61□□□□□ -1.03
CCDC60-204ENST00000539847 SPEF2Q9C093 1822 aa8.61□□□□□ -1.03
CCDC60-204ENST00000539847 A0A1W2PPC1 479 aa8.61□□□□□ -1.03
CCDC60-204ENST00000539847 CCDC175P0C221 793 aa8.61□□□□□ -1.03
CCDC60-204ENST00000539847 HOXD10P28358 340 aa8.61□□□□□ -1.03
CCDC60-204ENST00000539847 IL15P40933 162 aaPredicted RBP8.61□□□□□ -1.03
CCDC60-204ENST00000539847 SERPINB4P48594 390 aa8.61□□□□□ -1.03
CCDC60-204ENST00000539847 AARSP49588 968 aaKnown RBP eCLIP8.61□□□□□ -1.03
CCDC60-204ENST00000539847 MARSP56192 900 aaKnown RBP8.61□□□□□ -1.03
CCDC60-204ENST00000539847 CHMP4BP1P59074 171 aa8.61□□□□□ -1.03
CCDC60-204ENST00000539847 PTK2Q05397 1052 aa8.61□□□□□ -1.03
CCDC60-204ENST00000539847 PPATQ06203 517 aa8.61□□□□□ -1.03
CCDC60-204ENST00000539847 NCOA4Q13772 614 aa8.61□□□□□ -1.03
CCDC60-204ENST00000539847 NR1I3Q14994 352 aa8.61□□□□□ -1.03
CCDC60-204ENST00000539847 PTPAQ15257 358 aa8.61□□□□□ -1.03
CCDC60-204ENST00000539847 DCAF15Q66K64 600 aa8.61□□□□□ -1.03
CCDC60-204ENST00000539847 PTCRAQ6ISU1 281 aaPredicted RBP8.61□□□□□ -1.03
CCDC60-204ENST00000539847 WDR93Q6P2C0 686 aa8.61□□□□□ -1.03
CCDC60-204ENST00000539847 HHIPL2Q6UWX4 724 aa8.61□□□□□ -1.03
CCDC60-204ENST00000539847 RPAINQ86UA6 219 aa8.61□□□□□ -1.03
CCDC60-204ENST00000539847 TC2NQ8N9U0 490 aa8.61□□□□□ -1.03
CCDC60-204ENST00000539847 TEKT1Q969V4 418 aa8.61□□□□□ -1.03
CCDC60-204ENST00000539847 ZDHHC15Q96MV8 337 aa8.61□□□□□ -1.03
CCDC60-204ENST00000539847 CTAGE1Q96RT6 745 aa8.61□□□□□ -1.03
CCDC60-204ENST00000539847 TMEM39BQ9GZU3 492 aa8.61□□□□□ -1.03
CCDC60-204ENST00000539847 GEMIN8Q9NWZ8 242 aaKnown RBP8.61□□□□□ -1.03
CCDC60-204ENST00000539847 PCDHB9Q9Y5E1 797 aa8.61□□□□□ -1.03
CCDC60-204ENST00000539847 SNCAIPQ9Y6H5 919 aa8.61□□□□□ -1.03
CCDC60-204ENST00000539847 CUL9Q8IWT3 2517 aa8.6□□□□□ -1.03
CCDC60-204ENST00000539847 A0A1B0GTH6 734 aa8.6□□□□□ -1.03
CCDC60-204ENST00000539847 TCP10L2B9ZVM9 353 aa8.6□□□□□ -1.03
CCDC60-204ENST00000539847 BTBD19C9JJ37 291 aa8.6□□□□□ -1.03
CCDC60-204ENST00000539847 AKR1B15C9JRZ8 316 aaPredicted RBP8.6□□□□□ -1.03
CCDC60-204ENST00000539847 KIF5CO60282 957 aa8.6□□□□□ -1.03
CCDC60-204ENST00000539847 LZTS3O60299 673 aaPredicted RBP8.6□□□□□ -1.03
CCDC60-204ENST00000539847 CIAO1O76071 339 aa8.6□□□□□ -1.03
CCDC60-204ENST00000539847 CCT2P78371 535 aaKnown RBP8.6□□□□□ -1.03
CCDC60-204ENST00000539847 TFCP2Q12800 502 aa8.6□□□□□ -1.03
CCDC60-204ENST00000539847 IMMTQ16891 758 aaKnown RBP8.6□□□□□ -1.03
CCDC60-204ENST00000539847 CAVIN4Q5BKX8 364 aa8.6□□□□□ -1.03
CCDC60-204ENST00000539847 C17orf99Q6UX52 265 aa8.6□□□□□ -1.03
CCDC60-204ENST00000539847 ZNF662Q6ZS27 426 aa8.6□□□□□ -1.03
CCDC60-204ENST00000539847 RASGRP2Q7LDG7 609 aa8.6□□□□□ -1.03
CCDC60-204ENST00000539847 UBE2Q1Q7Z7E8 422 aa8.6□□□□□ -1.03
CCDC60-204ENST00000539847 ANKRD23Q86SG2 305 aa8.6□□□□□ -1.03
CCDC60-204ENST00000539847 VPS37DQ86XT2 251 aa8.6□□□□□ -1.03
CCDC60-204ENST00000539847 ANKMY2Q8IV38 441 aa8.6□□□□□ -1.03
CCDC60-204ENST00000539847 SUGP1Q8IWZ8 645 aaKnown RBP8.6□□□□□ -1.03
CCDC60-204ENST00000539847 NEK11Q8NG66 645 aa8.6□□□□□ -1.03
CCDC60-204ENST00000539847 SPATA20Q8TB22 786 aa8.6□□□□□ -1.03
CCDC60-204ENST00000539847 PPM1EQ8WY54 764 aa8.6□□□□□ -1.03
CCDC60-204ENST00000539847 RUBCNQ92622 972 aa8.6□□□□□ -1.03
CCDC60-204ENST00000539847 KCTD12Q96CX2 325 aaKnown RBP8.6□□□□□ -1.03
CCDC60-204ENST00000539847 RPGRIP1Q96KN7 1286 aa8.6□□□□□ -1.03
CCDC60-204ENST00000539847 MTA3Q9BTC8 594 aa8.6□□□□□ -1.03
CCDC60-204ENST00000539847 FTOQ9C0B1 505 aaKnown RBP eCLIP8.6□□□□□ -1.03
CCDC60-204ENST00000539847 FANCLQ9NW38 375 aa8.6□□□□□ -1.03
CCDC60-204ENST00000539847 PAG1Q9NWQ8 432 aa8.6□□□□□ -1.03
CCDC60-204ENST00000539847 SRRDQ9UH36 339 aa8.6□□□□□ -1.03
CCDC60-204ENST00000539847 KCNH4Q9UQ05 1017 aa8.6□□□□□ -1.03
CCDC60-204ENST00000539847 RRP15Q9Y3B9 282 aaKnown RBP8.6□□□□□ -1.03
CCDC60-204ENST00000539847 RIPOR2Q9Y4F9 1068 aa8.6□□□□□ -1.03
CCDC60-204ENST00000539847 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.6□□□□□ -1.03
CCDC60-204ENST00000539847 ITIH6Q6UXX5 1313 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 STK36Q9NRP7 1315 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 OTOFQ9HC10 1997 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 LRRC10BA6NIK2 292 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 H0YGN5 161 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 CPLX1O14810 134 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 FANCGO15287 622 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 SEC31AO94979 1220 aaKnown RBP8.59□□□□□ -1.03
CCDC60-204ENST00000539847 CLSTN1O94985 981 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 GJB1P08034 283 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 ATP1A3P13637 1013 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 GYG1P46976 350 aa8.59□□□□□ -1.03
CCDC60-204ENST00000539847 CORO7P57737 925 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms