RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 SV2BQ7L1I2 683 aa25.2■■□□□ 1.62
HOMER3-204ENST00000539827 KCNK18Q7Z418 384 aa25.2■■□□□ 1.62
HOMER3-204ENST00000539827 PPP1R9AQ9ULJ8 1098 aa25.2■■□□□ 1.62
HOMER3-204ENST00000539827 MAPK8IP1Q9UQF2 711 aa25.2■■□□□ 1.62
HOMER3-204ENST00000539827 CDK11BP21127 795 aaKnown RBP25.19■■□□□ 1.62
HOMER3-204ENST00000539827 ASIC1P78348 528 aa25.19■■□□□ 1.62
HOMER3-204ENST00000539827 SPATA1Q5VX52 437 aa25.19■■□□□ 1.62
HOMER3-204ENST00000539827 FILIP1Q7Z7B0 1213 aa25.19■■□□□ 1.62
HOMER3-204ENST00000539827 RAD54LQ92698 747 aa25.19■■□□□ 1.62
HOMER3-204ENST00000539827 SLC38A10Q9HBR0 1119 aa25.19■■□□□ 1.62
HOMER3-204ENST00000539827 PITPNM2Q9BZ72 1349 aa25.18■■□□□ 1.62
HOMER3-204ENST00000539827 ALAS1P13196 640 aa25.18■■□□□ 1.62
HOMER3-204ENST00000539827 ZNF18P17022 549 aa25.18■■□□□ 1.62
HOMER3-204ENST00000539827 AMPD3Q01432 767 aa25.18■■□□□ 1.62
HOMER3-204ENST00000539827 LARP4BQ92615 738 aaKnown RBP25.18■■□□□ 1.62
HOMER3-204ENST00000539827 NAP1L5Q96NT1 182 aaPredicted RBP25.18■■□□□ 1.62
HOMER3-204ENST00000539827 ADM5C9JUS6 153 aa25.18■■□□□ 1.62
HOMER3-204ENST00000539827 MSH4O15457 936 aa25.18■■□□□ 1.62
HOMER3-204ENST00000539827 USP2O75604 605 aaPredicted RBP25.18■■□□□ 1.62
HOMER3-204ENST00000539827 PRCPP42785 496 aa25.18■■□□□ 1.62
HOMER3-204ENST00000539827 HMGCS2P54868 508 aa25.18■■□□□ 1.62
HOMER3-204ENST00000539827 TMC6Q7Z403 805 aa25.18■■□□□ 1.62
HOMER3-204ENST00000539827 TEX2Q8IWB9 1127 aa25.18■■□□□ 1.62
HOMER3-204ENST00000539827 ZFP91Q96JP5 570 aaPredicted RBP25.18■■□□□ 1.62
HOMER3-204ENST00000539827 CTDP1Q9Y5B0 961 aaPredicted RBP25.18■■□□□ 1.62
HOMER3-204ENST00000539827 NFIBO00712 420 aa25.17■■□□□ 1.62
HOMER3-204ENST00000539827 TBX3O15119 743 aa25.17■■□□□ 1.62
HOMER3-204ENST00000539827 CBFA2T2O43439 604 aa25.17■■□□□ 1.62
HOMER3-204ENST00000539827 ZNF500O60304 480 aaPredicted RBP25.17■■□□□ 1.62
HOMER3-204ENST00000539827 RHOBTB3O94955 611 aa25.17■■□□□ 1.62
HOMER3-204ENST00000539827 LRMPQ12912 555 aa25.17■■□□□ 1.62
HOMER3-204ENST00000539827 ARID5BQ14865 1188 aa25.17■■□□□ 1.62
HOMER3-204ENST00000539827 CLEC4DQ8WXI8 215 aa25.17■■□□□ 1.62
HOMER3-204ENST00000539827 DCPSQ96C86 337 aaKnown RBP25.17■■□□□ 1.62
HOMER3-204ENST00000539827 MYMKA6NI61 221 aa25.16■■□□□ 1.62
HOMER3-204ENST00000539827 NCAPH2Q6IBW4 605 aa25.16■■□□□ 1.62
HOMER3-204ENST00000539827 NELFBQ8WX92 580 aa25.16■■□□□ 1.62
HOMER3-204ENST00000539827 EHMT1Q9H9B1 1298 aa25.16■■□□□ 1.62
HOMER3-204ENST00000539827 HOMER2Q9NSB8 354 aa25.16■■□□□ 1.62
HOMER3-204ENST00000539827 PYCARDQ9ULZ3 195 aa25.16■■□□□ 1.62
HOMER3-204ENST00000539827 ZBED4O75132 1171 aa25.16■■□□□ 1.62
HOMER3-204ENST00000539827 PDE4DQ08499 809 aa25.16■■□□□ 1.62
HOMER3-204ENST00000539827 CACTINQ8WUQ7 758 aaKnown RBP25.16■■□□□ 1.62
HOMER3-204ENST00000539827 ATG4CQ96DT6 458 aa25.16■■□□□ 1.62
HOMER3-204ENST00000539827 PHIPQ8WWQ0 1821 aa25.16■■□□□ 1.62
HOMER3-204ENST00000539827 IGLV3-22A0A075B6J6 115 aa25.15■■□□□ 1.62
HOMER3-204ENST00000539827 SPIRE1Q08AE8 756 aa25.15■■□□□ 1.62
HOMER3-204ENST00000539827 PAK1Q13153 545 aa25.15■■□□□ 1.62
HOMER3-204ENST00000539827 MUM1L1Q5H9M0 696 aa25.15■■□□□ 1.62
HOMER3-204ENST00000539827 NOL9Q5SY16 702 aaKnown RBP25.15■■□□□ 1.62
HOMER3-204ENST00000539827 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.15■■□□□ 1.62
HOMER3-204ENST00000539827 CCDC47Q96A33 483 aaKnown RBP25.15■■□□□ 1.62
HOMER3-204ENST00000539827 WNK4Q96J92 1243 aa25.15■■□□□ 1.62
HOMER3-204ENST00000539827 FAM20AQ96MK3 541 aa25.15■■□□□ 1.62
HOMER3-204ENST00000539827 EXOC1Q9NV70 894 aa25.15■■□□□ 1.62
HOMER3-204ENST00000539827 RWDD2AQ9UIY3 292 aa25.15■■□□□ 1.62
HOMER3-204ENST00000539827 UTRNP46939 3433 aa25.15■■□□□ 1.62
HOMER3-204ENST00000539827 KDM3AQ9Y4C1 1321 aa25.15■■□□□ 1.62
HOMER3-204ENST00000539827 HSD17B4P51659 736 aa25.14■■□□□ 1.62
HOMER3-204ENST00000539827 TPD52L1Q16890 204 aaPredicted RBP25.14■■□□□ 1.62
HOMER3-204ENST00000539827 HYIQ5T013 277 aa25.14■■□□□ 1.62
HOMER3-204ENST00000539827 DYMQ7RTS9 669 aa25.14■■□□□ 1.62
HOMER3-204ENST00000539827 ADSSL1Q8N142 457 aa25.14■■□□□ 1.62
HOMER3-204ENST00000539827 C17orf53Q8N3J3 647 aaPredicted RBP25.14■■□□□ 1.62
HOMER3-204ENST00000539827 KIAA1024Q9UPX6 916 aa25.14■■□□□ 1.62
HOMER3-204ENST00000539827 POTEB3A0JP26 581 aa25.14■■□□□ 1.61
HOMER3-204ENST00000539827 POTECB2RU33 542 aa25.14■■□□□ 1.61
HOMER3-204ENST00000539827 MED24O75448 989 aa25.14■■□□□ 1.61
HOMER3-204ENST00000539827 PTPN21Q16825 1174 aa25.14■■□□□ 1.61
HOMER3-204ENST00000539827 POTEBQ6S5H4 581 aa25.14■■□□□ 1.61
HOMER3-204ENST00000539827 SULF1Q8IWU6 871 aa25.14■■□□□ 1.61
HOMER3-204ENST00000539827 GIMAP8Q8ND71 665 aaPredicted RBP25.14■■□□□ 1.61
HOMER3-204ENST00000539827 COL20A1Q9P218 1284 aa25.14■■□□□ 1.61
HOMER3-204ENST00000539827 C19orf81C9J6K1 198 aa25.13■■□□□ 1.61
HOMER3-204ENST00000539827 E9PMD0 336 aa25.13■■□□□ 1.61
HOMER3-204ENST00000539827 SLC30A10Q6XR72 485 aa25.13■■□□□ 1.61
HOMER3-204ENST00000539827 C12orf42Q96LP6 360 aa25.13■■□□□ 1.61
HOMER3-204ENST00000539827 NT5C3AQ9H0P0 336 aa25.13■■□□□ 1.61
HOMER3-204ENST00000539827 VWA5AO00534 786 aa25.13■■□□□ 1.61
HOMER3-204ENST00000539827 MCF2L2Q86YR7 1114 aa25.13■■□□□ 1.61
HOMER3-204ENST00000539827 INTS13Q9NVM9 706 aa25.13■■□□□ 1.61
HOMER3-204ENST00000539827 FCER1AP12319 257 aa25.12■■□□□ 1.61
HOMER3-204ENST00000539827 MAP3K9P80192 1104 aa25.12■■□□□ 1.61
HOMER3-204ENST00000539827 HPS3Q969F9 1004 aa25.12■■□□□ 1.61
HOMER3-204ENST00000539827 IMPACTQ9P2X3 320 aa25.12■■□□□ 1.61
HOMER3-204ENST00000539827 VAV3Q9UKW4 847 aa25.12■■□□□ 1.61
HOMER3-204ENST00000539827 AFG3L2Q9Y4W6 797 aa25.12■■□□□ 1.61
HOMER3-204ENST00000539827 SSBP05455 408 aaKnown RBP eCLIP25.11■■□□□ 1.61
HOMER3-204ENST00000539827 SEMA3FQ13275 785 aa25.11■■□□□ 1.61
HOMER3-204ENST00000539827 CDKAL1Q5VV42 579 aa25.11■■□□□ 1.61
HOMER3-204ENST00000539827 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.11■■□□□ 1.61
HOMER3-204ENST00000539827 LRRC8AQ8IWT6 810 aa25.11■■□□□ 1.61
HOMER3-204ENST00000539827 TMOD4Q9NZQ9 345 aa25.11■■□□□ 1.61
HOMER3-204ENST00000539827 SNCAIPQ9Y6H5 919 aa25.11■■□□□ 1.61
HOMER3-204ENST00000539827 PARP14Q460N5 1801 aa25.11■■□□□ 1.61
HOMER3-204ENST00000539827 TRIM49BA6NDI0 452 aa25.11■■□□□ 1.61
HOMER3-204ENST00000539827 STK4Q13043 487 aa25.11■■□□□ 1.61
HOMER3-204ENST00000539827 VGLL4Q14135 290 aa25.11■■□□□ 1.61
HOMER3-204ENST00000539827 DPY19L2Q6NUT2 758 aa25.11■■□□□ 1.61
HOMER3-204ENST00000539827 ERMNQ8TAM6 284 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms