RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 BCS1LQ9Y276 419 aa11.38□□□□□ -0.59
SPARC-209ENST00000539687 GOLGB1Q14789 3259 aaKnown RBP11.37□□□□□ -0.59
SPARC-209ENST00000539687 USP17L15C9J2P7 530 aa11.37□□□□□ -0.59
SPARC-209ENST00000539687 USP17L13C9JLJ4 530 aa11.37□□□□□ -0.59
SPARC-209ENST00000539687 USP17L11C9JVI0 530 aa11.37□□□□□ -0.59
SPARC-209ENST00000539687 USP17L18D6R9N7 530 aa11.37□□□□□ -0.59
SPARC-209ENST00000539687 USP17L22D6RA61 530 aa11.37□□□□□ -0.59
SPARC-209ENST00000539687 USP17L17D6RBQ6 530 aa11.37□□□□□ -0.59
SPARC-209ENST00000539687 USP17L19D6RCP7 530 aa11.37□□□□□ -0.59
SPARC-209ENST00000539687 USP17L20D6RJB6 530 aa11.37□□□□□ -0.59
SPARC-209ENST00000539687 ARHGAP6O43182 974 aa11.37□□□□□ -0.59
SPARC-209ENST00000539687 ZSCAN12O43309 604 aa11.37□□□□□ -0.59
SPARC-209ENST00000539687 STX10O60499 249 aa11.37□□□□□ -0.59
SPARC-209ENST00000539687 CD44P16070 742 aaKnown RBP11.37□□□□□ -0.59
SPARC-209ENST00000539687 CCNE1P24864 410 aa11.37□□□□□ -0.59
SPARC-209ENST00000539687 CDC25AP30304 524 aa11.37□□□□□ -0.59
SPARC-209ENST00000539687 ZNF76P36508 570 aa11.37□□□□□ -0.59
SPARC-209ENST00000539687 CCT6AP40227 531 aaKnown RBP11.37□□□□□ -0.59
SPARC-209ENST00000539687 PRCPP42785 496 aa11.37□□□□□ -0.59
SPARC-209ENST00000539687 ECE1P42892 770 aa11.37□□□□□ -0.59
SPARC-209ENST00000539687 USP17L24Q0WX57 530 aa11.37□□□□□ -0.59
SPARC-209ENST00000539687 TBX2Q13207 712 aaPredicted RBP11.37□□□□□ -0.59
SPARC-209ENST00000539687 GRB10Q13322 594 aa11.37□□□□□ -0.59
SPARC-209ENST00000539687 RRP1BQ14684 758 aaKnown RBP11.37□□□□□ -0.59
SPARC-209ENST00000539687 KIF4BQ2VIQ3 1234 aa11.37□□□□□ -0.59
SPARC-209ENST00000539687 USH1GQ495M9 461 aa11.37□□□□□ -0.59
SPARC-209ENST00000539687 FAM83BQ5T0W9 1011 aa11.37□□□□□ -0.59
SPARC-209ENST00000539687 USP17L6PQ6QN14 398 aa11.37□□□□□ -0.59
SPARC-209ENST00000539687 KRT26Q7Z3Y9 468 aa11.37□□□□□ -0.59
SPARC-209ENST00000539687 CNGA4Q8IV77 575 aa11.37□□□□□ -0.59
SPARC-209ENST00000539687 NLGN2Q8NFZ4 835 aa11.37□□□□□ -0.59
SPARC-209ENST00000539687 STAMQ92783 540 aa11.37□□□□□ -0.59
SPARC-209ENST00000539687 NUP88Q99567 741 aaPredicted RBP11.37□□□□□ -0.59
SPARC-209ENST00000539687 ZNF341Q9BYN7 854 aa11.37□□□□□ -0.59
SPARC-209ENST00000539687 SAMSN1Q9NSI8 373 aaKnown RBP11.37□□□□□ -0.59
SPARC-209ENST00000539687 ADD3Q9UEY8 706 aaKnown RBP11.37□□□□□ -0.59
SPARC-209ENST00000539687 PITPNM2Q9BZ72 1349 aa11.36□□□□□ -0.59
SPARC-209ENST00000539687 KCNJ18B7U540 433 aa11.36□□□□□ -0.59
SPARC-209ENST00000539687 AKR1B15C9JRZ8 316 aaPredicted RBP11.36□□□□□ -0.59
SPARC-209ENST00000539687 N4BP3O15049 544 aa11.36□□□□□ -0.59
SPARC-209ENST00000539687 GRIN3BO60391 1043 aa11.36□□□□□ -0.59
SPARC-209ENST00000539687 ICAM1P05362 532 aa11.36□□□□□ -0.59
SPARC-209ENST00000539687 CASP1P29466 404 aa11.36□□□□□ -0.59
SPARC-209ENST00000539687 GMPSP49915 693 aaPredicted RBP11.36□□□□□ -0.59
SPARC-209ENST00000539687 LRRC63Q05C16 580 aa11.36□□□□□ -0.59
SPARC-209ENST00000539687 KCNJ12Q14500 433 aa11.36□□□□□ -0.59
SPARC-209ENST00000539687 NBPF9Q3BBW0 867 aa11.36□□□□□ -0.59
SPARC-209ENST00000539687 TCP11X2Q5H9J9 407 aa11.36□□□□□ -0.59
SPARC-209ENST00000539687 ARMCX5Q6P1M9 558 aa11.36□□□□□ -0.59
SPARC-209ENST00000539687 CCDC65Q8IXS2 484 aa11.36□□□□□ -0.59
SPARC-209ENST00000539687 MICALL2Q8IY33 904 aa11.36□□□□□ -0.59
SPARC-209ENST00000539687 CCAR2Q8N163 923 aaKnown RBP11.36□□□□□ -0.59
SPARC-209ENST00000539687 GUF1Q8N442 669 aaKnown RBP11.36□□□□□ -0.59
SPARC-209ENST00000539687 PRPF38AQ8NAV1 312 aaKnown RBP11.36□□□□□ -0.59
SPARC-209ENST00000539687 NEK9Q8TD19 979 aa11.36□□□□□ -0.59
SPARC-209ENST00000539687 ACER1Q8TDN7 264 aa11.36□□□□□ -0.59
SPARC-209ENST00000539687 HAS1Q92839 578 aa11.36□□□□□ -0.59
SPARC-209ENST00000539687 P2RX5Q93086 422 aa11.36□□□□□ -0.59
SPARC-209ENST00000539687 TRIM47Q96LD4 638 aa11.36□□□□□ -0.59
SPARC-209ENST00000539687 PNMA5Q96PV4 448 aa11.36□□□□□ -0.59
SPARC-209ENST00000539687 PANX2Q96RD6 677 aa11.36□□□□□ -0.59
SPARC-209ENST00000539687 TSG101Q99816 390 aa11.36□□□□□ -0.59
SPARC-209ENST00000539687 GPBP1L1Q9HC44 474 aaPredicted RBP11.36□□□□□ -0.59
SPARC-209ENST00000539687 CNOT7Q9UIV1 285 aaKnown RBP11.36□□□□□ -0.59
SPARC-209ENST00000539687 R3HCC1Q9Y3T6 440 aaKnown RBP11.36□□□□□ -0.59
SPARC-209ENST00000539687 CTDP1Q9Y5B0 961 aaPredicted RBP11.36□□□□□ -0.59
SPARC-209ENST00000539687 A0A1W2PQC6 194 aa11.35□□□□□ -0.59
SPARC-209ENST00000539687 POTEMA6NI47 508 aa11.35□□□□□ -0.59
SPARC-209ENST00000539687 PHF20L1A8MW92 1017 aa11.35□□□□□ -0.59
SPARC-209ENST00000539687 YBX3P16989 372 aaKnown RBP eCLIP11.35□□□□□ -0.59
SPARC-209ENST00000539687 STX17P56962 302 aa11.35□□□□□ -0.59
SPARC-209ENST00000539687 JAG1P78504 1218 aa11.35□□□□□ -0.59
SPARC-209ENST00000539687 GHRHRQ02643 423 aa11.35□□□□□ -0.59
SPARC-209ENST00000539687 PTPN14Q15678 1187 aa11.35□□□□□ -0.59
SPARC-209ENST00000539687 MIGA2Q7L4E1 593 aa11.35□□□□□ -0.59
SPARC-209ENST00000539687 SPICE1Q8N0Z3 855 aa11.35□□□□□ -0.59
SPARC-209ENST00000539687 RETREG2Q8NC44 543 aa11.35□□□□□ -0.59
SPARC-209ENST00000539687 ETNPPLQ8TBG4 499 aa11.35□□□□□ -0.59
SPARC-209ENST00000539687 KIFC2Q96AC6 838 aa11.35□□□□□ -0.59
SPARC-209ENST00000539687 BAG1Q99933 345 aaPredicted RBP11.35□□□□□ -0.59
SPARC-209ENST00000539687 SLF1Q9BQI6 1058 aa11.35□□□□□ -0.59
SPARC-209ENST00000539687 WDR18Q9BV38 432 aa11.35□□□□□ -0.59
SPARC-209ENST00000539687 NUP58Q9BVL2 599 aa11.35□□□□□ -0.59
SPARC-209ENST00000539687 WDR11Q9BZH6 1224 aa11.35□□□□□ -0.59
SPARC-209ENST00000539687 TMX1Q9H3N1 280 aa11.35□□□□□ -0.59
SPARC-209ENST00000539687 BLOC1S4Q9NUP1 217 aa11.35□□□□□ -0.59
SPARC-209ENST00000539687 GDAQ9Y2T3 454 aa11.35□□□□□ -0.59
SPARC-209ENST00000539687 EDIL3O43854 480 aa11.34□□□□□ -0.59
SPARC-209ENST00000539687 SLURP2P0DP57 97 aa11.34□□□□□ -0.59
SPARC-209ENST00000539687 TNNT1P13805 278 aa11.34□□□□□ -0.59
SPARC-209ENST00000539687 RPA1P27694 616 aa11.34□□□□□ -0.59
SPARC-209ENST00000539687 DNM2P50570 870 aa11.34□□□□□ -0.59
SPARC-209ENST00000539687 COPB1P53618 953 aaKnown RBP11.34□□□□□ -0.59
SPARC-209ENST00000539687 KRT31Q15323 416 aa11.34□□□□□ -0.59
SPARC-209ENST00000539687 SHROOM1Q2M3G4 852 aaPredicted RBP11.34□□□□□ -0.59
SPARC-209ENST00000539687 PRR16Q569H4 304 aa11.34□□□□□ -0.59
SPARC-209ENST00000539687 TTI2Q6NXR4 508 aa11.34□□□□□ -0.59
SPARC-209ENST00000539687 NIPA1Q7RTP0 329 aa11.34□□□□□ -0.59
SPARC-209ENST00000539687 SMYD4Q8IYR2 804 aaPredicted RBP11.34□□□□□ -0.59
SPARC-209ENST00000539687 SCYL3Q8IZE3 742 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms