RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 NAV1Q8NEY1 1877 aa10.71□□□□□ -0.69
CDH13-204ENST00000539548 COL16A1Q07092 1604 aaPredicted RBP10.71□□□□□ -0.69
CDH13-204ENST00000539548 A0A087WUV0 522 aaPredicted RBP10.71□□□□□ -0.69
CDH13-204ENST00000539548 ESYT2A0FGR8 921 aa10.71□□□□□ -0.69
CDH13-204ENST00000539548 RBAK-RBAKDNI3L0D1 243 aa10.71□□□□□ -0.69
CDH13-204ENST00000539548 CLSTN1O94985 981 aa10.71□□□□□ -0.69
CDH13-204ENST00000539548 BAG3O95817 575 aa10.71□□□□□ -0.69
CDH13-204ENST00000539548 CPP00450 1065 aa10.71□□□□□ -0.69
CDH13-204ENST00000539548 LDHBP07195 334 aaKnown RBP10.71□□□□□ -0.69
CDH13-204ENST00000539548 GOLGA8HP0CJ92 632 aa10.71□□□□□ -0.69
CDH13-204ENST00000539548 FXR2P51116 673 aaKnown RBP eCLIP10.71□□□□□ -0.69
CDH13-204ENST00000539548 SKOR1P84550 965 aa10.71□□□□□ -0.69
CDH13-204ENST00000539548 SOGA3Q5TF21 947 aa10.71□□□□□ -0.69
CDH13-204ENST00000539548 TXNRD3Q86VQ6 643 aa10.71□□□□□ -0.69
CDH13-204ENST00000539548 WDR66Q8TBY9 1149 aa10.71□□□□□ -0.69
CDH13-204ENST00000539548 TBCKQ8TEA7 893 aa10.71□□□□□ -0.69
CDH13-204ENST00000539548 DRC1Q96MC2 740 aa10.71□□□□□ -0.69
CDH13-204ENST00000539548 PNMA5Q96PV4 448 aa10.71□□□□□ -0.69
CDH13-204ENST00000539548 TLR10Q9BXR5 811 aa10.71□□□□□ -0.69
CDH13-204ENST00000539548 NYXQ9GZU5 481 aa10.71□□□□□ -0.69
CDH13-204ENST00000539548 ZNF287Q9HBT7 754 aa10.71□□□□□ -0.69
CDH13-204ENST00000539548 STX8Q9UNK0 236 aa10.71□□□□□ -0.69
CDH13-204ENST00000539548 THRAP3Q9Y2W1 955 aaKnown RBP10.71□□□□□ -0.69
CDH13-204ENST00000539548 ZNF831Q5JPB2 1677 aa10.71□□□□□ -0.7
CDH13-204ENST00000539548 SLC7A5Q01650 507 aa10.7□□□□□ -0.7
CDH13-204ENST00000539548 PDIA5Q14554 519 aa10.7□□□□□ -0.7
CDH13-204ENST00000539548 KLHDC7AQ5VTJ3 777 aa10.7□□□□□ -0.7
CDH13-204ENST00000539548 TBC1D9BQ66K14 1250 aa10.7□□□□□ -0.7
CDH13-204ENST00000539548 LRRC55Q6ZSA7 311 aa10.7□□□□□ -0.7
CDH13-204ENST00000539548 PACS2Q86VP3 889 aa10.7□□□□□ -0.7
CDH13-204ENST00000539548 LARP4BQ92615 738 aaKnown RBP10.7□□□□□ -0.7
CDH13-204ENST00000539548 SYN2Q92777 582 aaPredicted RBP10.7□□□□□ -0.7
CDH13-204ENST00000539548 NOX5Q96PH1 765 aa10.7□□□□□ -0.7
CDH13-204ENST00000539548 HINFPQ9BQA5 517 aa10.7□□□□□ -0.7
CDH13-204ENST00000539548 LRRC27Q9C0I9 530 aa10.7□□□□□ -0.7
CDH13-204ENST00000539548 NUCKS1Q9H1E3 243 aaKnown RBP10.7□□□□□ -0.7
CDH13-204ENST00000539548 RIC8AQ9NPQ8 531 aa10.7□□□□□ -0.7
CDH13-204ENST00000539548 SALL4Q9UJQ4 1053 aa10.7□□□□□ -0.7
CDH13-204ENST00000539548 MTMR7Q9Y216 660 aa10.7□□□□□ -0.7
CDH13-204ENST00000539548 LDHCP07864 332 aa10.7□□□□□ -0.7
CDH13-204ENST00000539548 TXKP42681 527 aa10.7□□□□□ -0.7
CDH13-204ENST00000539548 MATR3P43243 847 aaKnown RBP eCLIP10.7□□□□□ -0.7
CDH13-204ENST00000539548 EHHADHQ08426 723 aa10.7□□□□□ -0.7
CDH13-204ENST00000539548 HGSNATQ68CP4 663 aa10.7□□□□□ -0.7
CDH13-204ENST00000539548 BICDL1Q6ZP65 573 aa10.7□□□□□ -0.7
CDH13-204ENST00000539548 POTEDQ86YR6 584 aa10.7□□□□□ -0.7
CDH13-204ENST00000539548 REXO1Q8N1G1 1221 aaKnown RBP10.7□□□□□ -0.7
CDH13-204ENST00000539548 PROM2Q8N271 834 aa10.7□□□□□ -0.7
CDH13-204ENST00000539548 SLC44A5Q8NCS7 719 aa10.7□□□□□ -0.7
CDH13-204ENST00000539548 NEDD1Q8NHV4 660 aa10.7□□□□□ -0.7
CDH13-204ENST00000539548 SEC63Q9UGP8 760 aaKnown RBP10.7□□□□□ -0.7
CDH13-204ENST00000539548 JAG2Q9Y219 1238 aa10.7□□□□□ -0.7
CDH13-204ENST00000539548 SPATA31A1Q5TZJ5 1347 aa10.7□□□□□ -0.7
CDH13-204ENST00000539548 CDK5RAP2Q96SN8 1893 aa10.7□□□□□ -0.7
CDH13-204ENST00000539548 EBAG9O00559 213 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 EIF3HO15372 352 aaKnown RBP eCLIP10.69□□□□□ -0.7
CDH13-204ENST00000539548 NCK2O43639 380 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 HSF2BPO75031 334 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 CXCR5P32302 372 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 RASSF7Q02833 373 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 KCNMA1Q12791 1236 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 CALCRLQ16602 461 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 TMEM266Q2M3C6 531 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 CFAP221Q4G0U5 840 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 C8orf74Q6P047 294 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 IFT20Q8IY31 132 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 TSEN2Q8NCE0 465 aaKnown RBP10.69□□□□□ -0.7
CDH13-204ENST00000539548 TGFBRAP1Q8WUH2 860 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 RAD54LQ92698 747 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 MTMR8Q96EF0 704 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 CDK5RAP3Q96JB5 506 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 TSG101Q99816 390 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 CPVLQ9H3G5 476 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 GDF3Q9NR23 364 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 RBM12Q9NTZ6 932 aaKnown RBP10.69□□□□□ -0.7
CDH13-204ENST00000539548 BIN2Q9UBW5 565 aaPredicted RBP10.69□□□□□ -0.7
CDH13-204ENST00000539548 GRIN2DO15399 1336 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 ANKRD65E5RJM6 399 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 hCG_1984214I3L0E3 225 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 CDK8P49336 464 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 GFPT1Q06210 699 aaPredicted RBP10.69□□□□□ -0.7
CDH13-204ENST00000539548 DYMQ7RTS9 669 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 CACNA2D4Q7Z3S7 1137 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 TADA2BQ86TJ2 420 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 ZNF713Q8N859 430 aaPredicted RBP10.69□□□□□ -0.7
CDH13-204ENST00000539548 LINC00116Q8NCU8 138 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 PIGSQ96S52 555 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 RAB34Q9BZG1 259 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 RIOX1Q9H6W3 641 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 CEP72Q9P209 647 aa10.69□□□□□ -0.7
CDH13-204ENST00000539548 ATAD5Q96QE3 1844 aa10.68□□□□□ -0.7
CDH13-204ENST00000539548 SERPING1P05155 500 aa10.68□□□□□ -0.7
CDH13-204ENST00000539548 TM4SF1P30408 202 aa10.68□□□□□ -0.7
CDH13-204ENST00000539548 SLC1A4P43007 532 aa10.68□□□□□ -0.7
CDH13-204ENST00000539548 CCT5P48643 541 aa10.68□□□□□ -0.7
CDH13-204ENST00000539548 GNGT1P63211 74 aa10.68□□□□□ -0.7
CDH13-204ENST00000539548 APBA1Q02410 837 aa10.68□□□□□ -0.7
CDH13-204ENST00000539548 SEPT2Q15019 361 aa10.68□□□□□ -0.7
CDH13-204ENST00000539548 NAB2Q15742 525 aa10.68□□□□□ -0.7
CDH13-204ENST00000539548 SLC9C1Q4G0N8 1177 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms