RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 ZFP91Q96JP5 570 aaPredicted RBP22.07■■□□□ 1.12
TNFRSF1A-212ENST00000539372 MAP3K14Q99558 947 aa22.07■■□□□ 1.12
TNFRSF1A-212ENST00000539372 MTA3Q9BTC8 594 aa22.07■■□□□ 1.12
TNFRSF1A-212ENST00000539372 DDX41Q9UJV9 622 aaKnown RBP22.07■■□□□ 1.12
TNFRSF1A-212ENST00000539372 STXBP5LQ9Y2K9 1186 aa22.07■■□□□ 1.12
TNFRSF1A-212ENST00000539372 MRVI1Q9Y6F6 885 aa22.07■■□□□ 1.12
TNFRSF1A-212ENST00000539372 PLEKHA8P1O95397 391 aa22.06■■□□□ 1.12
TNFRSF1A-212ENST00000539372 CMTR1Q8N1G2 835 aaKnown RBP22.06■■□□□ 1.12
TNFRSF1A-212ENST00000539372 TMTC2Q8N394 836 aa22.06■■□□□ 1.12
TNFRSF1A-212ENST00000539372 SAMD3Q8N6K7 520 aa22.06■■□□□ 1.12
TNFRSF1A-212ENST00000539372 RRP36Q96EU6 259 aaKnown RBP22.06■■□□□ 1.12
TNFRSF1A-212ENST00000539372 WNT8AQ9H1J5 351 aa22.06■■□□□ 1.12
TNFRSF1A-212ENST00000539372 IL23AQ9NPF7 189 aa22.06■■□□□ 1.12
TNFRSF1A-212ENST00000539372 COL6A3P12111 3177 aa22.05■■□□□ 1.12
TNFRSF1A-212ENST00000539372 SORBS3O60504 671 aa22.05■■□□□ 1.12
TNFRSF1A-212ENST00000539372 CDC45O75419 566 aa22.05■■□□□ 1.12
TNFRSF1A-212ENST00000539372 SUPT20HL2P0C7V6 817 aa22.05■■□□□ 1.12
TNFRSF1A-212ENST00000539372 NFRKBQ6P4R8 1299 aa22.05■■□□□ 1.12
TNFRSF1A-212ENST00000539372 PSRC1Q6PGN9 363 aaPredicted RBP22.05■■□□□ 1.12
TNFRSF1A-212ENST00000539372 CCDC136Q96JN2 1154 aa22.05■■□□□ 1.12
TNFRSF1A-212ENST00000539372 SPZ1Q9BXG8 430 aa22.05■■□□□ 1.12
TNFRSF1A-212ENST00000539372 SEMA6BQ9H3T3 888 aa22.05■■□□□ 1.12
TNFRSF1A-212ENST00000539372 KIAA1217Q5T5P2 1943 aa22.05■■□□□ 1.12
TNFRSF1A-212ENST00000539372 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.04■■□□□ 1.12
TNFRSF1A-212ENST00000539372 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.04■■□□□ 1.12
TNFRSF1A-212ENST00000539372 RGS20O76081 388 aa22.04■■□□□ 1.12
TNFRSF1A-212ENST00000539372 CCND2P30279 289 aa22.04■■□□□ 1.12
TNFRSF1A-212ENST00000539372 LIFRP42702 1097 aa22.04■■□□□ 1.12
TNFRSF1A-212ENST00000539372 RNF20Q5VTR2 975 aa22.04■■□□□ 1.12
TNFRSF1A-212ENST00000539372 VSIG10LQ86VR7 867 aa22.04■■□□□ 1.12
TNFRSF1A-212ENST00000539372 SRBD1Q8N5C6 995 aaKnown RBP22.04■■□□□ 1.12
TNFRSF1A-212ENST00000539372 SCLYQ96I15 445 aa22.04■■□□□ 1.12
TNFRSF1A-212ENST00000539372 LZTS2Q9BRK4 669 aa22.04■■□□□ 1.12
TNFRSF1A-212ENST00000539372 TTYH1Q9H313 450 aaPredicted RBP22.04■■□□□ 1.12
TNFRSF1A-212ENST00000539372 SEC63Q9UGP8 760 aaKnown RBP22.04■■□□□ 1.12
TNFRSF1A-212ENST00000539372 SLC12A7Q9Y666 1083 aa22.04■■□□□ 1.12
TNFRSF1A-212ENST00000539372 SCN10AQ9Y5Y9 1956 aa22.04■■□□□ 1.12
TNFRSF1A-212ENST00000539372 GNAQP50148 359 aa22.03■■□□□ 1.12
TNFRSF1A-212ENST00000539372 DHX37Q8IY37 1157 aaKnown RBP22.03■■□□□ 1.12
TNFRSF1A-212ENST00000539372 GRXCR1A8MXD5 290 aa22.02■■□□□ 1.12
TNFRSF1A-212ENST00000539372 CASTP20810 708 aaKnown RBP22.02■■□□□ 1.12
TNFRSF1A-212ENST00000539372 SMARCA1P28370 1054 aa22.02■■□□□ 1.12
TNFRSF1A-212ENST00000539372 LAMC2Q13753 1193 aa22.02■■□□□ 1.12
TNFRSF1A-212ENST00000539372 DGKDQ16760 1214 aa22.02■■□□□ 1.12
TNFRSF1A-212ENST00000539372 RASIP1Q5U651 963 aa22.02■■□□□ 1.12
TNFRSF1A-212ENST00000539372 SLC17A8Q8NDX2 589 aa22.02■■□□□ 1.12
TNFRSF1A-212ENST00000539372 KAT2BQ92831 832 aa22.02■■□□□ 1.12
TNFRSF1A-212ENST00000539372 GPKOWQ92917 476 aaPredicted RBP eCLIP22.02■■□□□ 1.12
TNFRSF1A-212ENST00000539372 EMID1Q96A84 441 aaPredicted RBP22.02■■□□□ 1.12
TNFRSF1A-212ENST00000539372 TCEANC2Q96MN5 208 aa22.02■■□□□ 1.12
TNFRSF1A-212ENST00000539372 NEK1Q96PY6 1258 aa22.02■■□□□ 1.12
TNFRSF1A-212ENST00000539372 hCG_1642624A0A1W2PR95 340 aa22.01■■□□□ 1.11
TNFRSF1A-212ENST00000539372 FGBP02675 491 aa22.01■■□□□ 1.11
TNFRSF1A-212ENST00000539372 ZNF286BP0CG31 522 aa22.01■■□□□ 1.11
TNFRSF1A-212ENST00000539372 CALM1P0DP23 149 aa22.01■■□□□ 1.11
TNFRSF1A-212ENST00000539372 CALM2P0DP24 149 aa22.01■■□□□ 1.11
TNFRSF1A-212ENST00000539372 CALM3P0DP25 149 aa22.01■■□□□ 1.11
TNFRSF1A-212ENST00000539372 SP2Q02086 613 aa22.01■■□□□ 1.11
TNFRSF1A-212ENST00000539372 OTOP2Q7RTS6 562 aa22.01■■□□□ 1.11
TNFRSF1A-212ENST00000539372 MICU3Q86XE3 530 aa22.01■■□□□ 1.11
TNFRSF1A-212ENST00000539372 RASEFQ8IZ41 740 aa22.01■■□□□ 1.11
TNFRSF1A-212ENST00000539372 CCDC82Q8N4S0 544 aa22.01■■□□□ 1.11
TNFRSF1A-212ENST00000539372 PPTC7Q8NI37 304 aa22.01■■□□□ 1.11
TNFRSF1A-212ENST00000539372 HERVK_113Q902F9 699 aa22.01■■□□□ 1.11
TNFRSF1A-212ENST00000539372 CDX2Q99626 313 aaPredicted RBP22.01■■□□□ 1.11
TNFRSF1A-212ENST00000539372 CXXC1Q9P0U4 656 aaPredicted RBP22.01■■□□□ 1.11
TNFRSF1A-212ENST00000539372 NOD1Q9Y239 953 aa22.01■■□□□ 1.11
TNFRSF1A-212ENST00000539372 DNAJB2P25686 324 aa22■■□□□ 1.11
TNFRSF1A-212ENST00000539372 PTPN11Q06124 597 aaPredicted RBP22■■□□□ 1.11
TNFRSF1A-212ENST00000539372 ADCK5Q3MIX3 580 aa22■■□□□ 1.11
TNFRSF1A-212ENST00000539372 CELF3Q5SZQ8 465 aaKnown RBP22■■□□□ 1.11
TNFRSF1A-212ENST00000539372 KCNV1Q6PIU1 500 aa22■■□□□ 1.11
TNFRSF1A-212ENST00000539372 USP17L6PQ6QN14 398 aa22■■□□□ 1.11
TNFRSF1A-212ENST00000539372 FANCBQ8NB91 859 aa22■■□□□ 1.11
TNFRSF1A-212ENST00000539372 SMARCC2Q8TAQ2 1214 aa22■■□□□ 1.11
TNFRSF1A-212ENST00000539372 GGPS1O95749 300 aa21.99■■□□□ 1.11
TNFRSF1A-212ENST00000539372 UBA1P22314 1058 aaKnown RBP21.99■■□□□ 1.11
TNFRSF1A-212ENST00000539372 PBX2P40425 430 aa21.99■■□□□ 1.11
TNFRSF1A-212ENST00000539372 PTGISQ16647 500 aa21.99■■□□□ 1.11
TNFRSF1A-212ENST00000539372 MYSM1Q5VVJ2 828 aa21.99■■□□□ 1.11
TNFRSF1A-212ENST00000539372 GDF6Q6KF10 455 aaPredicted RBP21.99■■□□□ 1.11
TNFRSF1A-212ENST00000539372 TMTC3Q6ZXV5 915 aa21.99■■□□□ 1.11
TNFRSF1A-212ENST00000539372 DEFB128Q7Z7B8 93 aa21.99■■□□□ 1.11
TNFRSF1A-212ENST00000539372 SGMS1Q86VZ5 419 aa21.99■■□□□ 1.11
TNFRSF1A-212ENST00000539372 RPUSD2Q8IZ73 545 aaKnown RBP21.99■■□□□ 1.11
TNFRSF1A-212ENST00000539372 CUL5Q93034 780 aa21.99■■□□□ 1.11
TNFRSF1A-212ENST00000539372 VWCEQ96DN2 955 aa21.99■■□□□ 1.11
TNFRSF1A-212ENST00000539372 SPATA33Q96N06 139 aa21.99■■□□□ 1.11
TNFRSF1A-212ENST00000539372 ALG1Q9BT22 464 aa21.99■■□□□ 1.11
TNFRSF1A-212ENST00000539372 RTEL1Q9NZ71 1219 aa21.99■■□□□ 1.11
TNFRSF1A-212ENST00000539372 FRMPD4Q14CM0 1322 aa21.99■■□□□ 1.11
TNFRSF1A-212ENST00000539372 PSEN2P49810 448 aa21.98■■□□□ 1.11
TNFRSF1A-212ENST00000539372 MRPS9P82933 396 aaKnown RBP21.98■■□□□ 1.11
TNFRSF1A-212ENST00000539372 MFSD10Q14728 455 aa21.98■■□□□ 1.11
TNFRSF1A-212ENST00000539372 SYNE3Q6ZMZ3 975 aa21.98■■□□□ 1.11
TNFRSF1A-212ENST00000539372 MYLIPQ8WY64 445 aa21.98■■□□□ 1.11
TNFRSF1A-212ENST00000539372 TIFAQ96CG3 184 aa21.98■■□□□ 1.11
TNFRSF1A-212ENST00000539372 PBX4Q9BYU1 374 aa21.98■■□□□ 1.11
TNFRSF1A-212ENST00000539372 MTIF3Q9H2K0 278 aaKnown RBP21.98■■□□□ 1.11
TNFRSF1A-212ENST00000539372 MEIS2O14770 477 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms