RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 DDX4Q9NQI0 724 aaKnown RBP7.73□□□□□ -1.17
PROM1-219ENST00000539194 GUCA1BQ9UMX6 200 aa7.73□□□□□ -1.17
PROM1-219ENST00000539194 JAG2Q9Y219 1238 aa7.73□□□□□ -1.17
PROM1-219ENST00000539194 GRIN2DO15399 1336 aa7.73□□□□□ -1.17
PROM1-219ENST00000539194 UBA7P41226 1012 aa7.73□□□□□ -1.17
PROM1-219ENST00000539194 MMP14P50281 582 aa7.73□□□□□ -1.17
PROM1-219ENST00000539194 ARSHQ5FYA8 562 aa7.73□□□□□ -1.17
PROM1-219ENST00000539194 KRT26Q7Z3Y9 468 aa7.73□□□□□ -1.17
PROM1-219ENST00000539194 HDAC7Q8WUI4 952 aa7.73□□□□□ -1.17
PROM1-219ENST00000539194 DNAJC18Q9H819 358 aa7.73□□□□□ -1.17
PROM1-219ENST00000539194 FAN1Q9Y2M0 1017 aa7.73□□□□□ -1.17
PROM1-219ENST00000539194 JRKLQ9Y4A0 524 aa7.73□□□□□ -1.17
PROM1-219ENST00000539194 NUTM2BA6NNL0 878 aaPredicted RBP7.72□□□□□ -1.17
PROM1-219ENST00000539194 NUTM2EB1AL46 878 aaPredicted RBP7.72□□□□□ -1.17
PROM1-219ENST00000539194 TDP2O95551 362 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 RHOXF2BP0C7M4 288 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 GNA11P29992 359 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 SHMT1P34896 483 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 CCDC122Q5T0U0 273 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 PDXDC1Q6P996 788 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 SIAH1Q8IUQ4 282 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 MAPKAPK5Q8IW41 473 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 TRIM59Q8IWR1 403 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 CCDC24Q8N4L8 307 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 CERS5Q8N5B7 392 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 PIK3R5Q8WYR1 880 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 CAVIN3Q969G5 261 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 LENG9Q96B70 501 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 TRIM47Q96LD4 638 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 GPR101Q96P66 508 aaPredicted RBP7.72□□□□□ -1.17
PROM1-219ENST00000539194 RHOXF2Q9BQY4 288 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 GANQ9H2C0 597 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 PCDHA13Q9Y5I0 950 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 LOC285556D6RIA3 1793 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 BAG3O95817 575 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 COL2A1P02458 1487 aaPredicted RBP7.72□□□□□ -1.17
PROM1-219ENST00000539194 ZNF543Q08ER8 600 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 TBC1D8BQ0IIM8 1120 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 MAN2A1Q16706 1144 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 FAM98CQ17RN3 349 aaKnown RBP7.72□□□□□ -1.17
PROM1-219ENST00000539194 HAUS3Q68CZ6 603 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 FOXR1Q6PIV2 292 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 LARP4BQ92615 738 aaKnown RBP7.72□□□□□ -1.17
PROM1-219ENST00000539194 BORCS6Q96GS4 357 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 PLIN2Q99541 437 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 AIPL1Q9NZN9 384 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 SWAP70Q9UH65 585 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 FEZ2Q9UHY8 353 aaPredicted RBP7.72□□□□□ -1.17
PROM1-219ENST00000539194 DAGLAQ9Y4D2 1042 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 PCDHGC5Q9Y5F6 944 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 GNPATO15228 680 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 GYS1P13807 737 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 ECHS1P30084 290 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 SLC12A3P55017 1021 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 CYP27A1Q02318 531 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 MCM6Q14566 821 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 SEPT2Q15019 361 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 ZSCAN26Q16670 478 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 ASPRV1Q53RT3 343 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 BICDL1Q6ZP65 573 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 FAM114A1Q8IWE2 563 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 EHBP1Q8NDI1 1231 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 TBC1D16Q8TBP0 767 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 SMCR8Q8TEV9 937 aaPredicted RBP7.72□□□□□ -1.17
PROM1-219ENST00000539194 C6orf50Q9HD87 102 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 GDF3Q9NR23 364 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 LRWD1Q9UFC0 647 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 SUGT1Q9Y2Z0 365 aa7.72□□□□□ -1.17
PROM1-219ENST00000539194 KRT86O43790 486 aa7.71□□□□□ -1.17
PROM1-219ENST00000539194 KIF11P52732 1056 aa7.71□□□□□ -1.17
PROM1-219ENST00000539194 EZH2Q15910 746 aaKnown RBP7.71□□□□□ -1.17
PROM1-219ENST00000539194 LETM2Q2VYF4 491 aa7.71□□□□□ -1.17
PROM1-219ENST00000539194 ZNF804AQ7Z570 1209 aa7.71□□□□□ -1.17
PROM1-219ENST00000539194 REXO1Q8N1G1 1221 aaKnown RBP7.71□□□□□ -1.17
PROM1-219ENST00000539194 ETNPPLQ8TBG4 499 aa7.71□□□□□ -1.17
PROM1-219ENST00000539194 MKL1Q969V6 931 aa7.71□□□□□ -1.17
PROM1-219ENST00000539194 TSGA10Q9BZW7 698 aa7.71□□□□□ -1.17
PROM1-219ENST00000539194 LRRC53A6NM62 1247 aa7.71□□□□□ -1.18
PROM1-219ENST00000539194 CYLC1P35663 651 aaPredicted RBP7.71□□□□□ -1.18
PROM1-219ENST00000539194 NAPAP54920 295 aa7.71□□□□□ -1.18
PROM1-219ENST00000539194 SLC4A8Q2Y0W8 1093 aa7.71□□□□□ -1.18
PROM1-219ENST00000539194 C1orf131Q8NDD1 294 aaKnown RBP7.71□□□□□ -1.18
PROM1-219ENST00000539194 TRIM58Q8NG06 486 aa7.71□□□□□ -1.18
PROM1-219ENST00000539194 DDX12PQ92771 950 aa7.71□□□□□ -1.18
PROM1-219ENST00000539194 RRP36Q96EU6 259 aaKnown RBP7.71□□□□□ -1.18
PROM1-219ENST00000539194 SYT11Q9BT88 431 aa7.71□□□□□ -1.18
PROM1-219ENST00000539194 NOC4LQ9BVI4 516 aaKnown RBP7.71□□□□□ -1.18
PROM1-219ENST00000539194 SLC39A2Q9NP94 309 aa7.71□□□□□ -1.18
PROM1-219ENST00000539194 SAP30BPQ9UHR5 308 aaKnown RBP7.71□□□□□ -1.18
PROM1-219ENST00000539194 DMGDHQ9UI17 866 aaKnown RBP7.71□□□□□ -1.18
PROM1-219ENST00000539194 MYH11P35749 1972 aa7.71□□□□□ -1.18
PROM1-219ENST00000539194 POTEMA6NI47 508 aa7.71□□□□□ -1.18
PROM1-219ENST00000539194 CES2O00748 559 aa7.71□□□□□ -1.18
PROM1-219ENST00000539194 ATP2B4P23634 1241 aa7.71□□□□□ -1.18
PROM1-219ENST00000539194 SRLQ86TD4 932 aa7.71□□□□□ -1.18
PROM1-219ENST00000539194 ADGRF4Q8IZF3 695 aa7.71□□□□□ -1.18
PROM1-219ENST00000539194 RNF10Q8N5U6 811 aaKnown RBP7.71□□□□□ -1.18
PROM1-219ENST00000539194 SPATA4Q8NEY3 305 aa7.71□□□□□ -1.18
PROM1-219ENST00000539194 ANKRD20A12PQ8NF67 263 aa7.71□□□□□ -1.18
PROM1-219ENST00000539194 EEF2KMTQ96G04 330 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms