RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 PRR16Q569H4 304 aa17.43■□□□□ 0.38
VAMP1-207ENST00000539047 AXDND1Q5T1B0 1012 aaPredicted RBP17.43■□□□□ 0.38
VAMP1-207ENST00000539047 RESP18Q5W5W9 173 aa17.43■□□□□ 0.38
VAMP1-207ENST00000539047 CAVIN1Q6NZI2 390 aaKnown RBP17.43■□□□□ 0.38
VAMP1-207ENST00000539047 DNERQ8NFT8 737 aa17.43■□□□□ 0.38
VAMP1-207ENST00000539047 RASSF8Q8NHQ8 419 aa17.43■□□□□ 0.38
VAMP1-207ENST00000539047 CRYGNQ8WXF5 182 aa17.43■□□□□ 0.38
VAMP1-207ENST00000539047 AK8Q96MA6 479 aa17.43■□□□□ 0.38
VAMP1-207ENST00000539047 TXNRD2Q9NNW7 524 aa17.43■□□□□ 0.38
VAMP1-207ENST00000539047 PXMP2Q9NR77 195 aa17.43■□□□□ 0.38
VAMP1-207ENST00000539047 TCEAL9Q9UHQ7 104 aa17.43■□□□□ 0.38
VAMP1-207ENST00000539047 ZNF236Q9UL36 1845 aa17.42■□□□□ 0.38
VAMP1-207ENST00000539047 SLC37A4O43826 429 aa17.42■□□□□ 0.38
VAMP1-207ENST00000539047 STAM2O75886 525 aa17.42■□□□□ 0.38
VAMP1-207ENST00000539047 UBXN2AP68543 259 aa17.42■□□□□ 0.38
VAMP1-207ENST00000539047 CCDC183Q5T5S1 534 aa17.42■□□□□ 0.38
VAMP1-207ENST00000539047 NIPA1Q7RTP0 329 aa17.42■□□□□ 0.38
VAMP1-207ENST00000539047 PLA2G4DQ86XP0 818 aa17.42■□□□□ 0.38
VAMP1-207ENST00000539047 MBOAT7Q96N66 472 aa17.42■□□□□ 0.38
VAMP1-207ENST00000539047 CLIC6Q96NY7 704 aa17.42■□□□□ 0.38
VAMP1-207ENST00000539047 TAAR1Q96RJ0 339 aa17.42■□□□□ 0.38
VAMP1-207ENST00000539047 PTPN18Q99952 460 aa17.42■□□□□ 0.38
VAMP1-207ENST00000539047 CSRNP2Q9H175 543 aa17.42■□□□□ 0.38
VAMP1-207ENST00000539047 COL20A1Q9P218 1284 aa17.42■□□□□ 0.38
VAMP1-207ENST00000539047 RASSF10A6NK89 507 aa17.41■□□□□ 0.38
VAMP1-207ENST00000539047 IGF2BP3O00425 579 aaKnown RBP eCLIP17.41■□□□□ 0.38
VAMP1-207ENST00000539047 MYCLP12524 364 aaPredicted RBP17.41■□□□□ 0.38
VAMP1-207ENST00000539047 PFKFB1P16118 471 aa17.41■□□□□ 0.38
VAMP1-207ENST00000539047 MAPK4P31152 587 aa17.41■□□□□ 0.38
VAMP1-207ENST00000539047 TXKP42681 527 aa17.41■□□□□ 0.38
VAMP1-207ENST00000539047 SYKP43405 635 aa17.41■□□□□ 0.38
VAMP1-207ENST00000539047 CACNB1Q02641 598 aaPredicted RBP17.41■□□□□ 0.38
VAMP1-207ENST00000539047 PGM5Q15124 567 aa17.41■□□□□ 0.38
VAMP1-207ENST00000539047 CEP55Q53EZ4 464 aa17.41■□□□□ 0.38
VAMP1-207ENST00000539047 CYP4F22Q6NT55 531 aa17.41■□□□□ 0.38
VAMP1-207ENST00000539047 NLRX1Q86UT6 975 aa17.41■□□□□ 0.38
VAMP1-207ENST00000539047 C4orf32Q8N8J7 132 aa17.41■□□□□ 0.38
VAMP1-207ENST00000539047 CAPNS2Q96L46 248 aa17.41■□□□□ 0.38
VAMP1-207ENST00000539047 FAM20AQ96MK3 541 aa17.41■□□□□ 0.38
VAMP1-207ENST00000539047 IWS1Q96ST2 819 aa17.41■□□□□ 0.38
VAMP1-207ENST00000539047 PDCD2LQ9BRP1 358 aa17.41■□□□□ 0.38
VAMP1-207ENST00000539047 NUP62CLQ9H1M0 184 aa17.41■□□□□ 0.38
VAMP1-207ENST00000539047 TMEM60Q9H2L4 133 aa17.41■□□□□ 0.38
VAMP1-207ENST00000539047 HOOK1Q9UJC3 728 aaKnown RBP17.41■□□□□ 0.38
VAMP1-207ENST00000539047 STK24Q9Y6E0 443 aa17.41■□□□□ 0.38
VAMP1-207ENST00000539047 MRVI1Q9Y6F6 885 aa17.41■□□□□ 0.38
VAMP1-207ENST00000539047 A0A1B0GVL5 298 aa17.4■□□□□ 0.38
VAMP1-207ENST00000539047 LETM1O95202 739 aaPredicted RBP17.4■□□□□ 0.38
VAMP1-207ENST00000539047 UBA7P41226 1012 aa17.4■□□□□ 0.38
VAMP1-207ENST00000539047 FXR2P51116 673 aaKnown RBP eCLIP17.4■□□□□ 0.38
VAMP1-207ENST00000539047 GNPTABQ3T906 1256 aa17.4■□□□□ 0.38
VAMP1-207ENST00000539047 SHC4Q6S5L8 630 aa17.4■□□□□ 0.38
VAMP1-207ENST00000539047 TNS4Q8IZW8 715 aa17.4■□□□□ 0.38
VAMP1-207ENST00000539047 MXRA8Q9BRK3 442 aa17.4■□□□□ 0.38
VAMP1-207ENST00000539047 DACT1Q9NYF0 836 aa17.4■□□□□ 0.38
VAMP1-207ENST00000539047 CCDC39Q9UFE4 941 aa17.4■□□□□ 0.38
VAMP1-207ENST00000539047 PCDHA12Q9UN75 941 aa17.4■□□□□ 0.38
VAMP1-207ENST00000539047 LRRC37A2A6NM11 1700 aa17.4■□□□□ 0.38
VAMP1-207ENST00000539047 KIAA1217Q5T5P2 1943 aa17.39■□□□□ 0.37
VAMP1-207ENST00000539047 LOC102724159A0A0B4J2E5 919 aa17.39■□□□□ 0.37
VAMP1-207ENST00000539047 CTAGE5O15320 804 aa17.39■□□□□ 0.37
VAMP1-207ENST00000539047 STRNO43815 780 aa17.39■□□□□ 0.37
VAMP1-207ENST00000539047 PEX10O60683 326 aa17.39■□□□□ 0.37
VAMP1-207ENST00000539047 CAPN15O75808 1086 aa17.39■□□□□ 0.37
VAMP1-207ENST00000539047 LIG1P18858 919 aa17.39■□□□□ 0.37
VAMP1-207ENST00000539047 TM4SF4P48230 202 aa17.39■□□□□ 0.37
VAMP1-207ENST00000539047 PDE4DQ08499 809 aa17.39■□□□□ 0.37
VAMP1-207ENST00000539047 PWP2Q15269 919 aaKnown RBP17.39■□□□□ 0.37
VAMP1-207ENST00000539047 POTEEQ6S8J3 1075 aa17.39■□□□□ 0.37
VAMP1-207ENST00000539047 ABRAQ8N0Z2 381 aa17.39■□□□□ 0.37
VAMP1-207ENST00000539047 ERMNQ8TAM6 284 aa17.39■□□□□ 0.37
VAMP1-207ENST00000539047 SYMPKQ92797 1274 aaKnown RBP17.39■□□□□ 0.37
VAMP1-207ENST00000539047 CDK5RAP3Q96JB5 506 aa17.39■□□□□ 0.37
VAMP1-207ENST00000539047 CDHR1Q96JP9 859 aa17.39■□□□□ 0.37
VAMP1-207ENST00000539047 MTMR9Q96QG7 549 aa17.39■□□□□ 0.37
VAMP1-207ENST00000539047 TNMDQ9H2S6 317 aa17.39■□□□□ 0.37
VAMP1-207ENST00000539047 TTC12Q9H892 705 aaPredicted RBP17.39■□□□□ 0.37
VAMP1-207ENST00000539047 SLC5A4Q9NY91 659 aa17.39■□□□□ 0.37
VAMP1-207ENST00000539047 USP25Q9UHP3 1055 aa17.39■□□□□ 0.37
VAMP1-207ENST00000539047 KCNH3Q9ULD8 1083 aa17.39■□□□□ 0.37
VAMP1-207ENST00000539047 MGAMO43451 1857 aa17.38■□□□□ 0.37
VAMP1-207ENST00000539047 FAM86B1E9PN63 330 aa17.38■□□□□ 0.37
VAMP1-207ENST00000539047 FOXN1O15353 648 aa17.38■□□□□ 0.37
VAMP1-207ENST00000539047 NR1I2O75469 434 aa17.38■□□□□ 0.37
VAMP1-207ENST00000539047 NR3C2P08235 984 aa17.38■□□□□ 0.37
VAMP1-207ENST00000539047 FAM86B2P0C5J1 330 aa17.38■□□□□ 0.37
VAMP1-207ENST00000539047 BCRP11274 1271 aa17.38■□□□□ 0.37
VAMP1-207ENST00000539047 TECP42680 631 aa17.38■□□□□ 0.37
VAMP1-207ENST00000539047 ALDH5A1P51649 535 aaPredicted RBP17.38■□□□□ 0.37
VAMP1-207ENST00000539047 NDUFA8P51970 172 aa17.38■□□□□ 0.37
VAMP1-207ENST00000539047 MTMR1Q13613 665 aa17.38■□□□□ 0.37
VAMP1-207ENST00000539047 PDIA5Q14554 519 aa17.38■□□□□ 0.37
VAMP1-207ENST00000539047 STXBP2Q15833 593 aa17.38■□□□□ 0.37
VAMP1-207ENST00000539047 Q3C1V9 767 aa17.38■□□□□ 0.37
VAMP1-207ENST00000539047 CALML4Q96GE6 196 aa17.38■□□□□ 0.37
VAMP1-207ENST00000539047 ZNF577Q9BSK1 485 aa17.38■□□□□ 0.37
VAMP1-207ENST00000539047 WDR11Q9BZH6 1224 aa17.38■□□□□ 0.37
VAMP1-207ENST00000539047 GOLPH3LQ9H4A5 285 aa17.38■□□□□ 0.37
VAMP1-207ENST00000539047 EFCC1Q9HA90 598 aa17.38■□□□□ 0.37
VAMP1-207ENST00000539047 KCNMB3Q9NPA1 279 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms