RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 EMILIN3Q9NT22 766 aa15.85■□□□□ 0.13
ACTN1-205ENST00000538545 GPRC5DQ9NZD1 345 aa15.85■□□□□ 0.13
ACTN1-205ENST00000538545 ZNF536O15090 1300 aa15.84■□□□□ 0.13
ACTN1-205ENST00000538545 LTBP3Q9NS15 1303 aa15.84■□□□□ 0.13
ACTN1-205ENST00000538545 CHMP2AO43633 222 aa15.84■□□□□ 0.13
ACTN1-205ENST00000538545 FLOT1O75955 427 aa15.84■□□□□ 0.13
ACTN1-205ENST00000538545 CEP135Q66GS9 1140 aa15.84■□□□□ 0.13
ACTN1-205ENST00000538545 CPLX3Q8WVH0 158 aa15.84■□□□□ 0.13
ACTN1-205ENST00000538545 WDR18Q9BV38 432 aa15.84■□□□□ 0.13
ACTN1-205ENST00000538545 KCNMB3Q9NPA1 279 aa15.84■□□□□ 0.13
ACTN1-205ENST00000538545 COL20A1Q9P218 1284 aa15.84■□□□□ 0.13
ACTN1-205ENST00000538545 MSH4O15457 936 aa15.84■□□□□ 0.13
ACTN1-205ENST00000538545 ETNPPLQ8TBG4 499 aa15.84■□□□□ 0.13
ACTN1-205ENST00000538545 HOOK2Q96ED9 719 aa15.84■□□□□ 0.13
ACTN1-205ENST00000538545 TAB2Q9NYJ8 693 aa15.84■□□□□ 0.13
ACTN1-205ENST00000538545 CCPG1Q9ULG6 757 aa15.84■□□□□ 0.13
ACTN1-205ENST00000538545 ALAS1P13196 640 aa15.83■□□□□ 0.13
ACTN1-205ENST00000538545 VCAM1P19320 739 aa15.83■□□□□ 0.13
ACTN1-205ENST00000538545 SV2BQ7L1I2 683 aa15.83■□□□□ 0.13
ACTN1-205ENST00000538545 VSTM4Q8IW00 320 aa15.83■□□□□ 0.13
ACTN1-205ENST00000538545 KIAA0895Q8NCT3 520 aa15.83■□□□□ 0.13
ACTN1-205ENST00000538545 PYM1Q9BRP8 204 aaKnown RBP15.83■□□□□ 0.13
ACTN1-205ENST00000538545 FGFBP2Q9BYJ0 223 aa15.83■□□□□ 0.13
ACTN1-205ENST00000538545 YBX3P16989 372 aaKnown RBP eCLIP15.83■□□□□ 0.129e-8■■■□□ 15.8
ACTN1-205ENST00000538545 SREBF1P36956 1147 aa15.83■□□□□ 0.12
ACTN1-205ENST00000538545 USP11P51784 963 aa15.83■□□□□ 0.12
ACTN1-205ENST00000538545 AP3B2Q13367 1082 aa15.83■□□□□ 0.12
ACTN1-205ENST00000538545 MUM1L1Q5H9M0 696 aa15.83■□□□□ 0.12
ACTN1-205ENST00000538545 ADSSL1Q8N142 457 aa15.83■□□□□ 0.12
ACTN1-205ENST00000538545 CNKSR2Q8WXI2 1034 aa15.83■□□□□ 0.12
ACTN1-205ENST00000538545 DDX12PQ92771 950 aa15.83■□□□□ 0.12
ACTN1-205ENST00000538545 SPON1Q9HCB6 807 aa15.83■□□□□ 0.12
ACTN1-205ENST00000538545 RGL1Q9NZL6 768 aa15.83■□□□□ 0.12
ACTN1-205ENST00000538545 ZHX2Q9Y6X8 837 aa15.83■□□□□ 0.12
ACTN1-205ENST00000538545 EML1O00423 815 aa15.82■□□□□ 0.12
ACTN1-205ENST00000538545 ZBTB39O15060 712 aa15.82■□□□□ 0.12
ACTN1-205ENST00000538545 RHOBTB3O94955 611 aa15.82■□□□□ 0.12
ACTN1-205ENST00000538545 HMGCS2P54868 508 aa15.82■□□□□ 0.12
ACTN1-205ENST00000538545 TRMT1LQ7Z2T5 733 aaKnown RBP15.82■□□□□ 0.12
ACTN1-205ENST00000538545 IL31RAQ8NI17 732 aa15.82■□□□□ 0.12
ACTN1-205ENST00000538545 RAD54LQ92698 747 aa15.82■□□□□ 0.12
ACTN1-205ENST00000538545 EXOC1Q9NV70 894 aa15.82■□□□□ 0.12
ACTN1-205ENST00000538545 ABCB11O95342 1321 aa15.82■□□□□ 0.12
ACTN1-205ENST00000538545 CTNND1O60716 968 aaKnown RBP15.82■□□□□ 0.12
ACTN1-205ENST00000538545 LMNB1P20700 586 aa15.82■□□□□ 0.12
ACTN1-205ENST00000538545 MMP14P50281 582 aa15.82■□□□□ 0.12
ACTN1-205ENST00000538545 SPIRE1Q08AE8 756 aa15.82■□□□□ 0.12
ACTN1-205ENST00000538545 PDIA5Q14554 519 aa15.82■□□□□ 0.12
ACTN1-205ENST00000538545 CDKAL1Q5VV42 579 aa15.82■□□□□ 0.12
ACTN1-205ENST00000538545 IRF2BP1Q8IU81 584 aa15.82■□□□□ 0.12
ACTN1-205ENST00000538545 RPAP3Q9H6T3 665 aaPredicted RBP15.82■□□□□ 0.12
ACTN1-205ENST00000538545 RNF181Q9P0P0 153 aa15.82■□□□□ 0.12
ACTN1-205ENST00000538545 GCOM1H8Y6P7 765 aaPredicted RBP15.81■□□□□ 0.12
ACTN1-205ENST00000538545 DDX39AO00148 427 aaKnown RBP15.81■□□□□ 0.12
ACTN1-205ENST00000538545 TPM3P06753 285 aa15.81■□□□□ 0.12
ACTN1-205ENST00000538545 POLR2MP0CAP2 368 aa15.81■□□□□ 0.12
ACTN1-205ENST00000538545 GCFC2P16383 781 aaKnown RBP15.81■□□□□ 0.12
ACTN1-205ENST00000538545 SFPQP23246 707 aaKnown RBP eCLIP15.81■□□□□ 0.127e-7■■■■□ 21
ACTN1-205ENST00000538545 KRT31Q15323 416 aa15.81■□□□□ 0.12
ACTN1-205ENST00000538545 GIMAP8Q8ND71 665 aaPredicted RBP15.81■□□□□ 0.12
ACTN1-205ENST00000538545 RAB34Q9BZG1 259 aa15.81■□□□□ 0.12
ACTN1-205ENST00000538545 RMND1Q9NWS8 449 aa15.81■□□□□ 0.12
ACTN1-205ENST00000538545 FEM1BQ9UK73 627 aa15.81■□□□□ 0.12
ACTN1-205ENST00000538545 PES1O00541 588 aaKnown RBP15.81■□□□□ 0.12
ACTN1-205ENST00000538545 NR1I3Q14994 352 aa15.81■□□□□ 0.12
ACTN1-205ENST00000538545 CATSPER3Q86XQ3 398 aa15.81■□□□□ 0.12
ACTN1-205ENST00000538545 ATG4CQ96DT6 458 aa15.81■□□□□ 0.12
ACTN1-205ENST00000538545 C7orf25Q9BPX7 421 aa15.81■□□□□ 0.12
ACTN1-205ENST00000538545 SLF1Q9BQI6 1058 aa15.81■□□□□ 0.12
ACTN1-205ENST00000538545 SRRTQ9BXP5 876 aaKnown RBP15.81■□□□□ 0.12
ACTN1-205ENST00000538545 SH2D4AQ9H788 454 aa15.81■□□□□ 0.12
ACTN1-205ENST00000538545 RIPK3Q9Y572 518 aa15.81■□□□□ 0.12
ACTN1-205ENST00000538545 SBF1O95248 1867 aa15.81■□□□□ 0.12
ACTN1-205ENST00000538545 ARP10275 920 aa15.81■□□□□ 0.12
ACTN1-205ENST00000538545 PABPC4Q13310 644 aaKnown RBP eCLIP15.81■□□□□ 0.12
ACTN1-205ENST00000538545 TMEM119Q4V9L6 283 aa15.81■□□□□ 0.12
ACTN1-205ENST00000538545 ANKRD40Q6AI12 368 aa15.81■□□□□ 0.12
ACTN1-205ENST00000538545 ZHX3Q9H4I2 956 aa15.81■□□□□ 0.12
ACTN1-205ENST00000538545 SPTLC3Q9NUV7 552 aa15.81■□□□□ 0.12
ACTN1-205ENST00000538545 RWDD2AQ9UIY3 292 aa15.81■□□□□ 0.12
ACTN1-205ENST00000538545 IGLV3-22A0A075B6J6 115 aa15.8■□□□□ 0.12
ACTN1-205ENST00000538545 CYP3A7-CYP3A51PA0A087WV96 503 aa15.8■□□□□ 0.12
ACTN1-205ENST00000538545 ADM5C9JUS6 153 aa15.8■□□□□ 0.12
ACTN1-205ENST00000538545 PTPRAP18433 802 aa15.8■□□□□ 0.12
ACTN1-205ENST00000538545 CYP3A7P24462 503 aa15.8■□□□□ 0.12
ACTN1-205ENST00000538545 ORC2Q13416 577 aaPredicted RBP15.8■□□□□ 0.12
ACTN1-205ENST00000538545 TRIM47Q96LD4 638 aa15.8■□□□□ 0.12
ACTN1-205ENST00000538545 SYT17Q9BSW7 474 aa15.8■□□□□ 0.12
ACTN1-205ENST00000538545 ADD3Q9UEY8 706 aaKnown RBP15.8■□□□□ 0.12
ACTN1-205ENST00000538545 CBFA2T2O43439 604 aa15.8■□□□□ 0.12
ACTN1-205ENST00000538545 MOB2Q70IA6 237 aa15.8■□□□□ 0.12
ACTN1-205ENST00000538545 PRPF38AQ8NAV1 312 aaKnown RBP15.8■□□□□ 0.12
ACTN1-205ENST00000538545 MBOAT7Q96N66 472 aa15.8■□□□□ 0.12
ACTN1-205ENST00000538545 KIAA1683Q9H0B3 1180 aa15.8■□□□□ 0.12
ACTN1-205ENST00000538545 GLT8D2Q9H1C3 349 aa15.8■□□□□ 0.12
ACTN1-205ENST00000538545 A0A1B0GTH6 734 aa15.79■□□□□ 0.12
ACTN1-205ENST00000538545 KCNJ18B7U540 433 aa15.79■□□□□ 0.12
ACTN1-205ENST00000538545 CTTNQ14247 550 aaKnown RBP15.79■□□□□ 0.12
ACTN1-205ENST00000538545 KCNJ12Q14500 433 aa15.79■□□□□ 0.12
ACTN1-205ENST00000538545 KCNB1Q14721 858 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms