RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 BMP3P12645 472 aa12.74□□□□□ -0.37
SLC28A1-204ENST00000538177 PRKCSHP14314 528 aaPredicted RBP12.74□□□□□ -0.37
SLC28A1-204ENST00000538177 ERCC6LQ2NKX8 1250 aa12.74□□□□□ -0.37
SLC28A1-204ENST00000538177 MIIPQ5JXC2 388 aa12.74□□□□□ -0.37
SLC28A1-204ENST00000538177 FBXO11Q86XK2 927 aa12.74□□□□□ -0.37
SLC28A1-204ENST00000538177 DNAJC19Q96DA6 116 aa12.74□□□□□ -0.37
SLC28A1-204ENST00000538177 CSRNP1Q96S65 589 aa12.74□□□□□ -0.37
SLC28A1-204ENST00000538177 NUP58Q9BVL2 599 aa12.74□□□□□ -0.37
SLC28A1-204ENST00000538177 TTYH3Q9C0H2 523 aa12.74□□□□□ -0.37
SLC28A1-204ENST00000538177 SPDYE2BA6NHP3 402 aa12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 TADA3O75528 432 aa12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 SPDYE6P0CI01 402 aa12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 ARHGAP4P98171 946 aa12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 TBC1D8BQ0IIM8 1120 aa12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 RSBN1LQ6PCB5 846 aaPredicted RBP12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 SLFN12Q8IYM2 578 aa12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 GJA10Q969M2 543 aa12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 ERGIC2Q96RQ1 377 aa12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 GMLQ99445 158 aa12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 P2RX7Q99572 595 aaKnown RBP12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 FEZ1Q99689 392 aa12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 LZTFL1Q9NQ48 299 aa12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 MRFAP1Q9Y605 127 aa12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 A0A0U1RQJ8 604 aa12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 A0A1W2PRG0 241 aa12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 RASSF10A6NK89 507 aa12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 PES1O00541 588 aaKnown RBP12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 KIF5CO60282 957 aa12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 FOSP01100 380 aaPredicted RBP12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 VIL1P09327 827 aaKnown RBP12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 MTIF2P46199 727 aaKnown RBP12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 LRRC63Q05C16 580 aa12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 FIGNQ5HY92 759 aa12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 RTKN2Q8IZC4 609 aa12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 ACRBPQ8NEB7 543 aa12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 ATRIPQ8WXE1 791 aa12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 PSMD1Q99460 953 aa12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 NOC4LQ9BVI4 516 aaKnown RBP12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 CARD6Q9BX69 1037 aa12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 IRX2Q9BZI1 471 aaPredicted RBP12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 TMOD2Q9NZR1 351 aa12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 ABCB11O95342 1321 aa12.73□□□□□ -0.37
SLC28A1-204ENST00000538177 EFCAB8A8MWE9 144 aa12.72□□□□□ -0.37
SLC28A1-204ENST00000538177 TBX3O15119 743 aa12.72□□□□□ -0.37
SLC28A1-204ENST00000538177 FGFR1OPO95684 399 aaKnown RBP12.72□□□□□ -0.37
SLC28A1-204ENST00000538177 IDEP14735 1019 aa12.72□□□□□ -0.37
SLC28A1-204ENST00000538177 EN1Q05925 392 aaPredicted RBP12.72□□□□□ -0.37
SLC28A1-204ENST00000538177 MEA1Q16626 185 aa12.72□□□□□ -0.37
SLC28A1-204ENST00000538177 Q4G0T1 1027 aa12.72□□□□□ -0.37
SLC28A1-204ENST00000538177 TEX2Q8IWB9 1127 aa12.72□□□□□ -0.37
SLC28A1-204ENST00000538177 TTLL6Q8N841 843 aa12.72□□□□□ -0.37
SLC28A1-204ENST00000538177 MNS1Q8NEH6 495 aa12.72□□□□□ -0.37
SLC28A1-204ENST00000538177 ETNPPLQ8TBG4 499 aa12.72□□□□□ -0.37
SLC28A1-204ENST00000538177 EEF2KMTQ96G04 330 aa12.72□□□□□ -0.37
SLC28A1-204ENST00000538177 CHP1Q99653 195 aa12.72□□□□□ -0.37
SLC28A1-204ENST00000538177 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.72□□□□□ -0.37
SLC28A1-204ENST00000538177 EPN1Q9Y6I3 576 aaPredicted RBP12.72□□□□□ -0.37
SLC28A1-204ENST00000538177 ARFGEF1Q9Y6D6 1849 aa12.72□□□□□ -0.37
SLC28A1-204ENST00000538177 H2AFXP16104 143 aaPredicted RBP12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 SREBF1P36956 1147 aa12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 ARHGAP25P42331 645 aa12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 SNAP25P60880 206 aa12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 TSR1Q2NL82 804 aaKnown RBP12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 FBXO38Q6PIJ6 1188 aa12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 WDR59Q6PJI9 974 aa12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 FAM151AQ8WW52 585 aa12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 UBXN4Q92575 508 aa12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 IQCDQ96DY2 449 aa12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 ARID3AQ99856 593 aa12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 BMP2KQ9NSY1 1161 aaPredicted RBP12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 ZNF70Q9UC06 446 aaPredicted RBP12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 PSME4Q14997 1843 aa12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 A0A1W2PQJ5 194 aa12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 OPLAHO14841 1288 aa12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 NDUFA10O95299 355 aa12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 CIITAP33076 1130 aa12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 ZBED6P86452 979 aa12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 SPIRE1Q08AE8 756 aa12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 COASYQ13057 564 aa12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 IKQ13123 557 aaPredicted RBP12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 GLIPR1L2Q4G1C9 344 aa12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 ARHGAP29Q52LW3 1261 aa12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 LENG9Q96B70 501 aa12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 SLF1Q9BQI6 1058 aa12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 MYO1AQ9UBC5 1043 aa12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 KIAA1024Q9UPX6 916 aa12.71□□□□□ -0.37
SLC28A1-204ENST00000538177 TCP10L2B9ZVM9 353 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 E9PMD0 336 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 PIK3CDO00329 1044 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 PSMD14O00487 310 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 PLA2G4BP0C869 781 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 TRIM21P19474 475 aaKnown RBP12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 TUBB2AQ13885 445 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 DLGAP5Q15398 846 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 USH1GQ495M9 461 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 FKBP15Q5T1M5 1219 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 LRRC55Q6ZSA7 311 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 FAM20AQ96MK3 541 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 TUBB2BQ9BVA1 445 aa12.7□□□□□ -0.38
SLC28A1-204ENST00000538177 PANK4Q9NVE7 773 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms