RNA–Protein interactions for RNA: ENST00000537796.2

NECAP1-203, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,418 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-203ENST00000537796 PCDHA1Q9Y5I3 950 aa8.31□□□□□ -1.08
NECAP1-203ENST00000537796 NAV1Q8NEY1 1877 aa8.31□□□□□ -1.08
NECAP1-203ENST00000537796 ITIH6Q6UXX5 1313 aa8.31□□□□□ -1.08
NECAP1-203ENST00000537796 SMCHD1A6NHR9 2005 aa8.31□□□□□ -1.08
NECAP1-203ENST00000537796 PDE2AO00408 941 aaPredicted RBP8.31□□□□□ -1.08
NECAP1-203ENST00000537796 BUB1O43683 1085 aa8.31□□□□□ -1.08
NECAP1-203ENST00000537796 SLC1A4P43007 532 aa8.31□□□□□ -1.08
NECAP1-203ENST00000537796 CRKP46108 304 aa8.31□□□□□ -1.08
NECAP1-203ENST00000537796 RRP1BQ14684 758 aaKnown RBP8.31□□□□□ -1.08
NECAP1-203ENST00000537796 PRR16Q569H4 304 aa8.31□□□□□ -1.08
NECAP1-203ENST00000537796 KRT79Q5XKE5 535 aa8.31□□□□□ -1.08
NECAP1-203ENST00000537796 CDAN1Q8IWY9 1227 aa8.31□□□□□ -1.08
NECAP1-203ENST00000537796 GPR161Q8N6U8 529 aaKnown RBP8.31□□□□□ -1.08
NECAP1-203ENST00000537796 TBC1D5Q92609 795 aa8.31□□□□□ -1.08
NECAP1-203ENST00000537796 JAKMIP2Q96AA8 810 aa8.31□□□□□ -1.08
NECAP1-203ENST00000537796 C7orf25Q9BPX7 421 aa8.31□□□□□ -1.08
NECAP1-203ENST00000537796 LZTS2Q9BRK4 669 aa8.31□□□□□ -1.08
NECAP1-203ENST00000537796 THAP9Q9H5L6 903 aa8.31□□□□□ -1.08
NECAP1-203ENST00000537796 PDE11AQ9HCR9 933 aa8.31□□□□□ -1.08
NECAP1-203ENST00000537796 FAM53CQ9NYF3 392 aa8.31□□□□□ -1.08
NECAP1-203ENST00000537796 MYO6Q9UM54 1294 aa8.31□□□□□ -1.08
NECAP1-203ENST00000537796 CAPN11Q9UMQ6 739 aa8.31□□□□□ -1.08
NECAP1-203ENST00000537796 BCS1LQ9Y276 419 aa8.31□□□□□ -1.08
NECAP1-203ENST00000537796 ATP6V0A2Q9Y487 856 aa8.31□□□□□ -1.08
NECAP1-203ENST00000537796 MYH1P12882 1939 aa8.3□□□□□ -1.08
NECAP1-203ENST00000537796 TRAF5O00463 557 aa8.3□□□□□ -1.08
NECAP1-203ENST00000537796 MOCS3O95396 460 aa8.3□□□□□ -1.08
NECAP1-203ENST00000537796 DNM2P50570 870 aa8.3□□□□□ -1.08
NECAP1-203ENST00000537796 SMC1AQ14683 1233 aaKnown RBP8.3□□□□□ -1.08
NECAP1-203ENST00000537796 EZH2Q15910 746 aaKnown RBP8.3□□□□□ -1.08
NECAP1-203ENST00000537796 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.3□□□□□ -1.08
NECAP1-203ENST00000537796 TBC1D22AQ8WUA7 517 aa8.3□□□□□ -1.08
NECAP1-203ENST00000537796 FUT8Q9BYC5 575 aa8.3□□□□□ -1.08
NECAP1-203ENST00000537796 JADE2Q9NQC1 790 aa8.3□□□□□ -1.08
NECAP1-203ENST00000537796 COL24A1Q17RW2 1714 aa8.3□□□□□ -1.08
NECAP1-203ENST00000537796 PNMA6FA0A0J9YX94 578 aa8.3□□□□□ -1.08
NECAP1-203ENST00000537796 CLRN2A0PK11 232 aa8.3□□□□□ -1.08
NECAP1-203ENST00000537796 ZBTB39O15060 712 aa8.3□□□□□ -1.08
NECAP1-203ENST00000537796 EEF1GP26641 437 aaKnown RBP8.3□□□□□ -1.08
NECAP1-203ENST00000537796 EIF4A3P38919 411 aaKnown RBP8.3□□□□□ -1.08
NECAP1-203ENST00000537796 PRPHP41219 470 aa8.3□□□□□ -1.08
NECAP1-203ENST00000537796 C2orf54Q08AI8 447 aa8.3□□□□□ -1.08
NECAP1-203ENST00000537796 PABPC4Q13310 644 aaKnown RBP eCLIP8.3□□□□□ -1.08
NECAP1-203ENST00000537796 GALNT17Q6IS24 598 aa8.3□□□□□ -1.08
NECAP1-203ENST00000537796 SP8Q8IXZ3 490 aa8.3□□□□□ -1.08
NECAP1-203ENST00000537796 RABGGTAQ92696 567 aa8.3□□□□□ -1.08
NECAP1-203ENST00000537796 RAD54LQ92698 747 aa8.3□□□□□ -1.08
NECAP1-203ENST00000537796 TEKT1Q969V4 418 aa8.3□□□□□ -1.08
NECAP1-203ENST00000537796 DHTKD1Q96HY7 919 aaPredicted RBP8.3□□□□□ -1.08
NECAP1-203ENST00000537796 PYM1Q9BRP8 204 aaKnown RBP8.3□□□□□ -1.08
NECAP1-203ENST00000537796 GTPBP4Q9BZE4 634 aaKnown RBP8.3□□□□□ -1.08
NECAP1-203ENST00000537796 ARHGAP20Q9P2F6 1191 aa8.3□□□□□ -1.08
NECAP1-203ENST00000537796 PCDHA12Q9UN75 941 aa8.3□□□□□ -1.08
NECAP1-203ENST00000537796 CTAGE15A4D2H0 777 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 LRRC53A6NM62 1247 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 CTAGE8P0CG41 777 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 POLD1P28340 1107 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 CASP5P51878 434 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 FAM193AP78312 1265 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 GFPT1Q06210 699 aaPredicted RBP8.29□□□□□ -1.08
NECAP1-203ENST00000537796 AOC3Q16853 763 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 TMEM266Q2M3C6 531 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 SLFN13Q68D06 897 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 KRT27Q7Z3Y8 459 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 CTAGE6Q86UF2 777 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 KSR1Q8IVT5 923 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 CTAGE4Q8IX94 777 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 PROCA1Q8NCQ7 364 aaPredicted RBP8.29□□□□□ -1.08
NECAP1-203ENST00000537796 CCDC47Q96A33 483 aaKnown RBP8.29□□□□□ -1.08
NECAP1-203ENST00000537796 FAM163AQ96GL9 167 aaPredicted RBP8.29□□□□□ -1.08
NECAP1-203ENST00000537796 DNAJC7Q99615 494 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 NDST4Q9H3R1 872 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 PODXL2Q9NZ53 605 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 FAM198AQ9UFP1 575 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 SALL4Q9UJQ4 1053 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 CAPN6Q9Y6Q1 641 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 CHMP2AO43633 222 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 MED24O75448 989 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 APBA3O96018 575 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 TUBB4AP04350 444 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 KRT18P05783 430 aaKnown RBP8.29□□□□□ -1.08
NECAP1-203ENST00000537796 HOXA10P31260 410 aaPredicted RBP8.29□□□□□ -1.08
NECAP1-203ENST00000537796 ECE1P42892 770 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 NAP1L1P55209 391 aaKnown RBP8.29□□□□□ -1.08
NECAP1-203ENST00000537796 COASYQ13057 564 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 CDC37Q16543 378 aaPredicted RBP8.29□□□□□ -1.08
NECAP1-203ENST00000537796 CERKLQ49MI3 558 aaPredicted RBP8.29□□□□□ -1.08
NECAP1-203ENST00000537796 HERC4Q5GLZ8 1057 aaPredicted RBP8.29□□□□□ -1.08
NECAP1-203ENST00000537796 CT47A1Q5JQC4 288 aaPredicted RBP8.29□□□□□ -1.08
NECAP1-203ENST00000537796 CNNM4Q6P4Q7 775 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 C15orf52Q6ZUT6 534 aaKnown RBP8.29□□□□□ -1.08
NECAP1-203ENST00000537796 SIAH1Q8IUQ4 282 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 SLF2Q8IX21 1173 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 CAGE1Q8TC20 777 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 RIN2Q8WYP3 895 aaPredicted RBP8.29□□□□□ -1.08
NECAP1-203ENST00000537796 CUL5Q93034 780 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 CCDC51Q96ER9 411 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 CCDC42Q96M95 316 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 CDK5RAP2Q96SN8 1893 aa8.29□□□□□ -1.08
NECAP1-203ENST00000537796 TRIM34Q9BYJ4 488 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms