RNA–Protein interactions for RNA: ENST00000537745.5

RAN-208, Transcript of RAN, member RAS oncogene family, human

TSL 1 (best)

Gene RAN, Length 1,065 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAN-208	ENST00000537745	PPP2R5B	Q15173	497 aa		12.47	□□□□□ -0.41
RAN-208	ENST00000537745	PTGIS	Q16647	500 aa		12.47	□□□□□ -0.41
RAN-208	ENST00000537745	GIMAP6	Q6P9H5	292 aa		12.47	□□□□□ -0.41
RAN-208	ENST00000537745	NEDD1	Q8NHV4	660 aa		12.47	□□□□□ -0.41
RAN-208	ENST00000537745	MORC4	Q8TE76	937 aa		12.47	□□□□□ -0.41
RAN-208	ENST00000537745	PTCD2	Q8WV60	388 aa	Known RBP	12.47	□□□□□ -0.41
RAN-208	ENST00000537745	GMCL1	Q96IK5	515 aa		12.47	□□□□□ -0.41
RAN-208	ENST00000537745	SNX27	Q96L92	541 aa		12.47	□□□□□ -0.41
RAN-208	ENST00000537745	TGS1	Q96RS0	853 aa	Known RBP	12.47	□□□□□ -0.41
RAN-208	ENST00000537745	RAD9A	Q99638	391 aa		12.47	□□□□□ -0.41
RAN-208	ENST00000537745	ADD3	Q9UEY8	706 aa	Known RBP	12.47	□□□□□ -0.41
RAN-208	ENST00000537745	SYNPO2	Q9UMS6	1093 aa		12.47	□□□□□ -0.41
RAN-208	ENST00000537745	STX8	Q9UNK0	236 aa		12.47	□□□□□ -0.41
RAN-208	ENST00000537745	LINC01553	A4QN01	128 aa		12.46	□□□□□ -0.41
RAN-208	ENST00000537745	NFIB	O00712	420 aa		12.46	□□□□□ -0.41
RAN-208	ENST00000537745	GPAA1	O43292	621 aa		12.46	□□□□□ -0.41
RAN-208	ENST00000537745	DCX	O43602	365 aa		12.46	□□□□□ -0.41
RAN-208	ENST00000537745	SMARCA5	O60264	1052 aa	Predicted RBP	12.46	□□□□□ -0.41
RAN-208	ENST00000537745	ERVK-21	P61565	698 aa		12.46	□□□□□ -0.41
RAN-208	ENST00000537745	PDE4B	Q07343	736 aa		12.46	□□□□□ -0.41
RAN-208	ENST00000537745	PDE4D	Q08499	809 aa		12.46	□□□□□ -0.41
RAN-208	ENST00000537745	CCDC96	Q2M329	555 aa		12.46	□□□□□ -0.41
RAN-208	ENST00000537745	RCSD1	Q6JBY9	416 aa		12.46	□□□□□ -0.41
RAN-208	ENST00000537745	SIRT2	Q8IXJ6	389 aa		12.46	□□□□□ -0.41
RAN-208	ENST00000537745	CCDC155	Q8N6L0	562 aa		12.46	□□□□□ -0.41
RAN-208	ENST00000537745	ANKS1A	Q92625	1134 aa		12.46	□□□□□ -0.41
RAN-208	ENST00000537745	SCN10A	Q9Y5Y9	1956 aa		12.45	□□□□□ -0.42
RAN-208	ENST00000537745	RBM47	A0AV96	593 aa	Known RBP	12.45	□□□□□ -0.42
RAN-208	ENST00000537745	GRXCR2	A6NFK2	248 aa		12.45	□□□□□ -0.42
RAN-208	ENST00000537745		M0R2C6	588 aa		12.45	□□□□□ -0.42
RAN-208	ENST00000537745	KPNA6	O60684	536 aa		12.45	□□□□□ -0.42
RAN-208	ENST00000537745	GJB5	O95377	273 aa		12.45	□□□□□ -0.42
RAN-208	ENST00000537745	SELP	P16109	830 aa		12.45	□□□□□ -0.42
RAN-208	ENST00000537745	SLC16A2	P36021	539 aa		12.45	□□□□□ -0.42
RAN-208	ENST00000537745	PTPN11	Q06124	597 aa	Predicted RBP	12.45	□□□□□ -0.42
RAN-208	ENST00000537745	GPNMB	Q14956	572 aa		12.45	□□□□□ -0.42
RAN-208	ENST00000537745	TCTN1	Q2MV58	587 aa		12.45	□□□□□ -0.42
RAN-208	ENST00000537745	LRRFIP1	Q32MZ4	808 aa	Known RBP	12.45	□□□□□ -0.42
RAN-208	ENST00000537745	GDF6	Q6KF10	455 aa	Predicted RBP	12.45	□□□□□ -0.42
RAN-208	ENST00000537745	CNKSR3	Q6P9H4	555 aa		12.45	□□□□□ -0.42
RAN-208	ENST00000537745	SLC30A10	Q6XR72	485 aa		12.45	□□□□□ -0.42
RAN-208	ENST00000537745	LRRC8D	Q7L1W4	858 aa		12.45	□□□□□ -0.42
RAN-208	ENST00000537745	IFNL3	Q8IZI9	196 aa		12.45	□□□□□ -0.42
RAN-208	ENST00000537745	AFAP1L1	Q8TED9	768 aa		12.45	□□□□□ -0.42
RAN-208	ENST00000537745	APPBP2	Q92624	585 aa		12.45	□□□□□ -0.42
RAN-208	ENST00000537745	C17orf80	Q9BSJ5	609 aa		12.45	□□□□□ -0.42
RAN-208	ENST00000537745		A6NJR5	290 aa		12.44	□□□□□ -0.42
RAN-208	ENST00000537745	RNF113A	O15541	343 aa	Known RBP	12.44	□□□□□ -0.42
RAN-208	ENST00000537745	NMT2	O60551	498 aa		12.44	□□□□□ -0.42
RAN-208	ENST00000537745	PLA2G6	O60733	806 aa		12.44	□□□□□ -0.42
RAN-208	ENST00000537745	ICAM1	P05362	532 aa		12.44	□□□□□ -0.42
RAN-208	ENST00000537745	TXN	P10599	105 aa	Known RBP	12.44	□□□□□ -0.42
RAN-208	ENST00000537745	TTBK2	Q6IQ55	1244 aa		12.44	□□□□□ -0.42
RAN-208	ENST00000537745	CAGE1	Q8TC20	777 aa		12.44	□□□□□ -0.42
RAN-208	ENST00000537745	TRIO	O75962	3097 aa		12.43	□□□□□ -0.42
RAN-208	ENST00000537745	PLIN4	Q96Q06	1357 aa		12.43	□□□□□ -0.42
RAN-208	ENST00000537745	C5orf42	Q9H799	3197 aa		12.43	□□□□□ -0.42
RAN-208	ENST00000537745	TSPY2	A6NKD2	308 aa		12.43	□□□□□ -0.42
RAN-208	ENST00000537745	PATL2	C9JE40	543 aa	Known RBP	12.43	□□□□□ -0.42
RAN-208	ENST00000537745	TK2	O00142	265 aa		12.43	□□□□□ -0.42
RAN-208	ENST00000537745	NKRF	O15226	690 aa	Known RBP eCLIP	12.43	□□□□□ -0.42	8e-9	■■□□□ 13.5
RAN-208	ENST00000537745	NBN	O60934	754 aa		12.43	□□□□□ -0.42
RAN-208	ENST00000537745	SLC3A2	P08195	630 aa	Known RBP	12.43	□□□□□ -0.42
RAN-208	ENST00000537745	GNAT2	P19087	354 aa		12.43	□□□□□ -0.42
RAN-208	ENST00000537745	IKBKE	Q14164	716 aa		12.43	□□□□□ -0.42
RAN-208	ENST00000537745	TSHZ3	Q63HK5	1081 aa		12.43	□□□□□ -0.42
RAN-208	ENST00000537745	CHST3	Q7LGC8	479 aa		12.43	□□□□□ -0.42
RAN-208	ENST00000537745	KBTBD3	Q8NAB2	608 aa		12.43	□□□□□ -0.42
RAN-208	ENST00000537745	SCFD2	Q8WU76	684 aa		12.43	□□□□□ -0.42
RAN-208	ENST00000537745	AFG1L	Q8WV93	481 aa		12.43	□□□□□ -0.42
RAN-208	ENST00000537745	DHX38	Q92620	1227 aa	Known RBP	12.43	□□□□□ -0.42
RAN-208	ENST00000537745	INCENP	Q9NQS7	918 aa		12.43	□□□□□ -0.42
RAN-208	ENST00000537745	SI	P14410	1827 aa		12.43	□□□□□ -0.42
RAN-208	ENST00000537745	ABHD14A-ACY1	A0A1B0GW23	586 aa		12.42	□□□□□ -0.42
RAN-208	ENST00000537745	ARIH2	O95376	493 aa		12.42	□□□□□ -0.42
RAN-208	ENST00000537745	CKB	P12277	381 aa		12.42	□□□□□ -0.42
RAN-208	ENST00000537745	PPARA	Q07869	468 aa		12.42	□□□□□ -0.42
RAN-208	ENST00000537745	PUS10	Q3MIT2	529 aa	Known RBP	12.42	□□□□□ -0.42
RAN-208	ENST00000537745	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	12.42	□□□□□ -0.42	1e-26	■■■■■ 97.4
RAN-208	ENST00000537745	RNF207	Q6ZRF8	634 aa		12.42	□□□□□ -0.42
RAN-208	ENST00000537745	HFE2	Q6ZVN8	426 aa		12.42	□□□□□ -0.42
RAN-208	ENST00000537745	NEK9	Q8TD19	979 aa		12.42	□□□□□ -0.42
RAN-208	ENST00000537745	CTAGE1	Q96RT6	745 aa		12.42	□□□□□ -0.42
RAN-208	ENST00000537745	SEC62	Q99442	399 aa	Known RBP	12.42	□□□□□ -0.42
RAN-208	ENST00000537745	PHOX2B	Q99453	314 aa		12.42	□□□□□ -0.42
RAN-208	ENST00000537745	MPHOSPH6	Q99547	160 aa	Known RBP	12.42	□□□□□ -0.42
RAN-208	ENST00000537745	NACAP1	Q9BZK3	213 aa		12.42	□□□□□ -0.42
RAN-208	ENST00000537745	NAPB	Q9H115	298 aa		12.42	□□□□□ -0.42
RAN-208	ENST00000537745	RANBP17	Q9H2T7	1088 aa	Known RBP	12.42	□□□□□ -0.42
RAN-208	ENST00000537745	GPCPD1	Q9NPB8	672 aa		12.42	□□□□□ -0.42
RAN-208	ENST00000537745	IL17RB	Q9NRM6	502 aa		12.42	□□□□□ -0.42
RAN-208	ENST00000537745	FRMPD2	Q68DX3	1309 aa	Predicted RBP	12.41	□□□□□ -0.42
RAN-208	ENST00000537745	CXCL10	P02778	98 aa		12.41	□□□□□ -0.42
RAN-208	ENST00000537745	RPS6	P62753	249 aa	Known RBP	12.41	□□□□□ -0.42
RAN-208	ENST00000537745	FOXK1	P85037	733 aa		12.41	□□□□□ -0.42
RAN-208	ENST00000537745	ZP2	Q05996	745 aa		12.41	□□□□□ -0.42
RAN-208	ENST00000537745	CTDSPL2	Q05D32	466 aa		12.41	□□□□□ -0.42
RAN-208	ENST00000537745	PTPRO	Q16827	1216 aa		12.41	□□□□□ -0.42
RAN-208	ENST00000537745	SYDE2	Q5VT97	1194 aa		12.41	□□□□□ -0.42
RAN-208	ENST00000537745	SEPT14	Q6ZU15	432 aa		12.41	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms