RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, human

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGA2-208	ENST00000537429	MOXD1	Q6UVY6	613 aa		27.58	■■■□□ 2.01
HMGA2-208	ENST00000537429	TINF2	Q9BSI4	451 aa		27.58	■■■□□ 2.01
HMGA2-208	ENST00000537429	FLRT1	Q9NZU1	646 aa		27.58	■■■□□ 2.01
HMGA2-208	ENST00000537429	CASP8AP2	Q9UKL3	1982 aa		27.58	■■■□□ 2.01
HMGA2-208	ENST00000537429	CYP3A7-CYP3A51P	A0A087WV96	503 aa		27.57	■■■□□ 2
HMGA2-208	ENST00000537429	LRRC37A2	A6NM11	1700 aa		27.57	■■■□□ 2
HMGA2-208	ENST00000537429	ATP2B1	P20020	1258 aa		27.57	■■■□□ 2
HMGA2-208	ENST00000537429	CYP3A7	P24462	503 aa		27.57	■■■□□ 2
HMGA2-208	ENST00000537429	PRMT2	P55345	433 aa		27.57	■■■□□ 2
HMGA2-208	ENST00000537429	PDE4D	Q08499	809 aa		27.57	■■■□□ 2
HMGA2-208	ENST00000537429	CCL14	Q16627	93 aa		27.57	■■■□□ 2
HMGA2-208	ENST00000537429	ARMCX2	Q7L311	632 aa		27.57	■■■□□ 2
HMGA2-208	ENST00000537429	OTOP1	Q7RTM1	612 aa		27.57	■■■□□ 2
HMGA2-208	ENST00000537429	ZFP91	Q96JP5	570 aa	Predicted RBP	27.57	■■■□□ 2
HMGA2-208	ENST00000537429	ATP6V1D	Q9Y5K8	247 aa		27.57	■■■□□ 2
HMGA2-208	ENST00000537429	MYH15	Q9Y2K3	1946 aa		27.57	■■■□□ 2
HMGA2-208	ENST00000537429	FAM86B1	E9PN63	330 aa		27.57	■■■□□ 2
HMGA2-208	ENST00000537429	CCNT1	O60563	726 aa	Known RBP	27.57	■■■□□ 2
HMGA2-208	ENST00000537429	EIF3J	O75822	258 aa	Known RBP	27.57	■■■□□ 2
HMGA2-208	ENST00000537429	STAM2	O75886	525 aa		27.57	■■■□□ 2
HMGA2-208	ENST00000537429	TDP2	O95551	362 aa		27.57	■■■□□ 2
HMGA2-208	ENST00000537429	FAM86B2	P0C5J1	330 aa		27.57	■■■□□ 2
HMGA2-208	ENST00000537429	NBR1	Q14596	966 aa		27.57	■■■□□ 2
HMGA2-208	ENST00000537429	TTC38	Q5R3I4	469 aa		27.57	■■■□□ 2
HMGA2-208	ENST00000537429	RAET1E	Q8TD07	263 aa		27.57	■■■□□ 2
HMGA2-208	ENST00000537429	MBOAT7	Q96N66	472 aa		27.57	■■■□□ 2
HMGA2-208	ENST00000537429	NAP1L4	Q99733	375 aa	Known RBP	27.57	■■■□□ 2
HMGA2-208	ENST00000537429	PCDHB6	Q9Y5E3	794 aa		27.57	■■■□□ 2
HMGA2-208	ENST00000537429	UBIAD1	Q9Y5Z9	338 aa		27.57	■■■□□ 2
HMGA2-208	ENST00000537429	SYNGAP1	Q96PV0	1343 aa		27.56	■■■□□ 2
HMGA2-208	ENST00000537429	GCFC2	P16383	781 aa	Known RBP	27.56	■■■□□ 2
HMGA2-208	ENST00000537429	ZNF76	P36508	570 aa		27.56	■■■□□ 2
HMGA2-208	ENST00000537429	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	27.56	■■■□□ 2
HMGA2-208	ENST00000537429	CEP55	Q53EZ4	464 aa		27.56	■■■□□ 2
HMGA2-208	ENST00000537429	FOXD4L3	Q6VB84	417 aa	Predicted RBP	27.56	■■■□□ 2
HMGA2-208	ENST00000537429	CYP2W1	Q8TAV3	490 aa		27.56	■■■□□ 2
HMGA2-208	ENST00000537429	MXRA8	Q9BRK3	442 aa		27.56	■■■□□ 2
HMGA2-208	ENST00000537429	RTEL1	Q9NZ71	1219 aa		27.56	■■■□□ 2
HMGA2-208	ENST00000537429	MCM3AP	O60318	1980 aa		27.55	■■■□□ 2
HMGA2-208	ENST00000537429	IGLV3-22	A0A075B6J6	115 aa		27.55	■■■□□ 2
HMGA2-208	ENST00000537429	SNAI1	O95863	264 aa	Predicted RBP	27.55	■■■□□ 2
HMGA2-208	ENST00000537429	ITGB5	P18084	799 aa		27.55	■■■□□ 2
HMGA2-208	ENST00000537429	INPP4A	Q96PE3	977 aa	Predicted RBP	27.55	■■■□□ 2
HMGA2-208	ENST00000537429	MEIS1	O00470	390 aa		27.54	■■■□□ 2
HMGA2-208	ENST00000537429	RGS20	O76081	388 aa		27.54	■■■□□ 2
HMGA2-208	ENST00000537429	JADE2	Q9NQC1	790 aa		27.54	■■■□□ 2
HMGA2-208	ENST00000537429	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	27.54	■■■□□ 2
HMGA2-208	ENST00000537429	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	27.54	■■■□□ 2
HMGA2-208	ENST00000537429	MCM7	P33993	719 aa		27.53	■■■□□ 2
HMGA2-208	ENST00000537429	DNM1	Q05193	864 aa	Known RBP	27.53	■■■□□ 2
HMGA2-208	ENST00000537429	ORC2	Q13416	577 aa	Predicted RBP	27.53	■■■□□ 2
HMGA2-208	ENST00000537429	ZNF174	Q15697	407 aa		27.53	■■■□□ 2
HMGA2-208	ENST00000537429		Q4G0T1	1027 aa		27.53	■■■□□ 2
HMGA2-208	ENST00000537429	ATL3	Q6DD88	541 aa		27.53	■■■□□ 2
HMGA2-208	ENST00000537429	NIPA1	Q7RTP0	329 aa		27.53	■■■□□ 2
HMGA2-208	ENST00000537429	TRMT44	Q8IYL2	757 aa	Known RBP	27.53	■■■□□ 2
HMGA2-208	ENST00000537429	TRIB2	Q92519	343 aa		27.53	■■■□□ 2
HMGA2-208	ENST00000537429	LENG9	Q96B70	501 aa		27.53	■■■□□ 2
HMGA2-208	ENST00000537429	ZNF396	Q96N95	335 aa	Predicted RBP	27.53	■■■□□ 2
HMGA2-208	ENST00000537429	USP28	Q96RU2	1077 aa		27.53	■■■□□ 2
HMGA2-208	ENST00000537429	DDX25	Q9UHL0	483 aa	Known RBP	27.53	■■■□□ 2
HMGA2-208	ENST00000537429	PRR16	Q569H4	304 aa		27.52	■■■□□ 2
HMGA2-208	ENST00000537429	WDR11	Q9BZH6	1224 aa		27.52	■■■□□ 2
HMGA2-208	ENST00000537429	FTO	Q9C0B1	505 aa	Known RBP eCLIP	27.52	■■■□□ 2
HMGA2-208	ENST00000537429	KATNBL1	Q9H079	304 aa		27.52	■■■□□ 2
HMGA2-208	ENST00000537429	HTT	P42858	3142 aa		27.52	■■■□□ 2
HMGA2-208	ENST00000537429	SLC37A4	O43826	429 aa		27.51	■■■□□ 2
HMGA2-208	ENST00000537429	CYP2C19	P33261	490 aa		27.51	■■■□□ 2
HMGA2-208	ENST00000537429	EEPD1	Q7L9B9	569 aa		27.51	■■■□□ 2
HMGA2-208	ENST00000537429	PXYLP1	Q8TE99	480 aa		27.51	■■■□□ 2
HMGA2-208	ENST00000537429	TNPO1	Q92973	898 aa	Known RBP	27.51	■■■□□ 2
HMGA2-208	ENST00000537429	CHAMP1	Q96JM3	812 aa		27.51	■■■□□ 2
HMGA2-208	ENST00000537429	TFIP11	Q9UBB9	837 aa	Known RBP	27.51	■■■□□ 2
HMGA2-208	ENST00000537429	CLIC4	Q9Y696	253 aa		27.51	■■■□□ 2
HMGA2-208	ENST00000537429	ADCY3	O60266	1144 aa		27.51	■■□□□ 1.99
HMGA2-208	ENST00000537429	SF3A1	Q15459	793 aa	Known RBP	27.51	■■□□□ 1.99
HMGA2-208	ENST00000537429	GNPTAB	Q3T906	1256 aa		27.51	■■□□□ 1.99
HMGA2-208	ENST00000537429	ANO1	Q5XXA6	986 aa		27.51	■■□□□ 1.99
HMGA2-208	ENST00000537429	NLRX1	Q86UT6	975 aa		27.51	■■□□□ 1.99
HMGA2-208	ENST00000537429	PLA2G4D	Q86XP0	818 aa		27.51	■■□□□ 1.99
HMGA2-208	ENST00000537429	GPRASP2	Q96D09	838 aa		27.51	■■□□□ 1.99
HMGA2-208	ENST00000537429	ABHD16B	Q9H3Z7	469 aa		27.51	■■□□□ 1.99
HMGA2-208	ENST00000537429	VTA1	Q9NP79	307 aa		27.51	■■□□□ 1.99
HMGA2-208	ENST00000537429	POLR3E	Q9NVU0	708 aa		27.51	■■□□□ 1.99
HMGA2-208	ENST00000537429	KIAA1217	Q5T5P2	1943 aa		27.51	■■□□□ 1.99
HMGA2-208	ENST00000537429	MAFG	O15525	162 aa		27.5	■■□□□ 1.99
HMGA2-208	ENST00000537429	NEMF	O60524	1076 aa		27.5	■■□□□ 1.99
HMGA2-208	ENST00000537429	SET	Q01105	290 aa	Predicted RBP	27.5	■■□□□ 1.99
HMGA2-208	ENST00000537429	MTMR1	Q13613	665 aa		27.5	■■□□□ 1.99
HMGA2-208	ENST00000537429	FBXO16	Q8IX29	292 aa	Predicted RBP	27.5	■■□□□ 1.99
HMGA2-208	ENST00000537429	PTPN22	Q9Y2R2	807 aa		27.5	■■□□□ 1.99
HMGA2-208	ENST00000537429	AR	P10275	920 aa		27.49	■■□□□ 1.99
HMGA2-208	ENST00000537429	ELN	P15502	786 aa		27.49	■■□□□ 1.99
HMGA2-208	ENST00000537429	ICAM3	P32942	547 aa		27.49	■■□□□ 1.99
HMGA2-208	ENST00000537429	CTU1	Q7Z7A3	348 aa	Known RBP	27.49	■■□□□ 1.99
HMGA2-208	ENST00000537429	POTED	Q86YR6	584 aa		27.49	■■□□□ 1.99
HMGA2-208	ENST00000537429	C4orf32	Q8N8J7	132 aa		27.49	■■□□□ 1.99
HMGA2-208	ENST00000537429	KCNH7	Q9NS40	1196 aa		27.49	■■□□□ 1.99
HMGA2-208	ENST00000537429	CFAP45	Q9UL16	551 aa		27.49	■■□□□ 1.99
HMGA2-208	ENST00000537429	FIBP	O43427	364 aa		27.48	■■□□□ 1.99

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