RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 KAT6BQ8WYB5 2073 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 SPOPO43791 374 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 KRT15P19012 456 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 SKIV2L2P42285 1042 aaKnown RBP5.89□□□□□ -1.47
PTPRD-213ENST00000537002 SLC39A6Q13433 755 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 BLMHQ13867 455 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 FIGNQ5HY92 759 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 ARHGAP24Q8N264 748 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 DPF2Q92785 391 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 CYFIP2Q96F07 1278 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 QTRT2Q9H974 415 aaKnown RBP5.89□□□□□ -1.47
PTPRD-213ENST00000537002 SUGCTQ9HAC7 445 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 CIDEBQ9UHD4 219 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 TRMT112Q9UI30 125 aaKnown RBP5.89□□□□□ -1.47
PTPRD-213ENST00000537002 PPP1R9AQ9ULJ8 1098 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 TRPC6Q9Y210 931 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 DAAM1Q9Y4D1 1078 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 V9GY48 417 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-213ENST00000537002 GRIN2DO15399 1336 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 SUN1O94901 812 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 FTCDO95954 541 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 SLCO1A2P46721 670 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 LBRQ14739 615 aaKnown RBP5.89□□□□□ -1.47
PTPRD-213ENST00000537002 SGSM1Q2NKQ1 1148 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 SV2BQ7L1I2 683 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 GALNT15Q8N3T1 639 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 MORC4Q8TE76 937 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 LSM14BQ9BX40 385 aaKnown RBP5.89□□□□□ -1.47
PTPRD-213ENST00000537002 IRX2Q9BZI1 471 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-213ENST00000537002 PAPOLBQ9NRJ5 636 aaKnown RBP5.89□□□□□ -1.47
PTPRD-213ENST00000537002 ABHD10Q9NUJ1 306 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 ANGEL1Q9UNK9 670 aaKnown RBP5.89□□□□□ -1.47
PTPRD-213ENST00000537002 DIP2AQ14689 1571 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 MAP2P11137 1827 aaKnown RBP5.89□□□□□ -1.47
PTPRD-213ENST00000537002 CCDC169A6NNP5 214 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 H0Y3Z8 333 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 NPTXRO95502 500 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 NT5C2P49902 561 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 PDE6CP51160 858 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.89□□□□□ -1.47
PTPRD-213ENST00000537002 KRT79Q5XKE5 535 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 DYMQ7RTS9 669 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 ZNF589Q86UQ0 364 aaPredicted RBP5.89□□□□□ -1.47
PTPRD-213ENST00000537002 NOSTRINQ8IVI9 506 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 NOD2Q9HC29 1040 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 NDUFA13Q9P0J0 144 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 ADD3Q9UEY8 706 aaKnown RBP5.89□□□□□ -1.47
PTPRD-213ENST00000537002 MYH15Q9Y2K3 1946 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 ACEP12821 1306 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 CES2O00748 559 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 DESP17661 470 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 PAX7P23759 505 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 MTA1Q13330 715 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 DZIP1Q86YF9 867 aaKnown RBP5.89□□□□□ -1.47
PTPRD-213ENST00000537002 SH3TC2Q8TF17 1288 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 TATDN2Q93075 761 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 H7C1W4 665 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 HSPA1LP34931 641 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 CCNG1P51959 295 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 CYP27A1Q02318 531 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 VWA3BQ502W6 1294 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 CFAP157Q5JU67 520 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 TLDC1Q6P9B6 456 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 RAB17Q9H0T7 212 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 VPS37BQ9H9H4 285 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 DLG5Q8TDM6 1919 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 ARHGAP42A6NI28 874 aa5.88□□□□□ -1.47
PTPRD-213ENST00000537002 O00370 1275 aa5.88□□□□□ -1.47
PTPRD-213ENST00000537002 BACH1O14867 736 aa5.88□□□□□ -1.47
PTPRD-213ENST00000537002 CYP7A1P22680 504 aa5.88□□□□□ -1.47
PTPRD-213ENST00000537002 KIF23Q02241 960 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-213ENST00000537002 DHX9Q08211 1270 aaKnown RBP5.88□□□□□ -1.47
PTPRD-213ENST00000537002 PLS1Q14651 629 aa5.88□□□□□ -1.47
PTPRD-213ENST00000537002 MTF1Q14872 753 aa5.88□□□□□ -1.47
PTPRD-213ENST00000537002 CNNM4Q6P4Q7 775 aa5.88□□□□□ -1.47
PTPRD-213ENST00000537002 RRP36Q96EU6 259 aaKnown RBP5.88□□□□□ -1.47
PTPRD-213ENST00000537002 ELAC2Q9BQ52 826 aaKnown RBP5.88□□□□□ -1.47
PTPRD-213ENST00000537002 TLR7Q9NYK1 1049 aaKnown RBP5.88□□□□□ -1.47
PTPRD-213ENST00000537002 G3BP2Q9UN86 482 aaKnown RBP5.88□□□□□ -1.47
PTPRD-213ENST00000537002 ESYT3A0FGR9 886 aa5.88□□□□□ -1.47
PTPRD-213ENST00000537002 CCDC188H7C350 402 aa5.88□□□□□ -1.47
PTPRD-213ENST00000537002 ASAP2O43150 1006 aa5.88□□□□□ -1.47
PTPRD-213ENST00000537002 TNFAIP3P21580 790 aa5.88□□□□□ -1.47
PTPRD-213ENST00000537002 TIMM10P62072 90 aa5.88□□□□□ -1.47
PTPRD-213ENST00000537002 LAMB3Q13751 1172 aa5.88□□□□□ -1.47
PTPRD-213ENST00000537002 DDB1Q16531 1140 aa5.88□□□□□ -1.47
PTPRD-213ENST00000537002 ANKRD20A3Q5VUR7 823 aa5.88□□□□□ -1.47
PTPRD-213ENST00000537002 CDKAL1Q5VV42 579 aa5.88□□□□□ -1.47
PTPRD-213ENST00000537002 BICDL1Q6ZP65 573 aa5.88□□□□□ -1.47
PTPRD-213ENST00000537002 NELFCDQ8IXH7 590 aa5.88□□□□□ -1.47
PTPRD-213ENST00000537002 EEF2KMTQ96G04 330 aa5.88□□□□□ -1.47
PTPRD-213ENST00000537002 TMEM87BQ96K49 555 aa5.88□□□□□ -1.47
PTPRD-213ENST00000537002 KIF9Q9HAQ2 790 aa5.88□□□□□ -1.47
PTPRD-213ENST00000537002 PDP2Q9P2J9 529 aa5.88□□□□□ -1.47
PTPRD-213ENST00000537002 RWDD2AQ9UIY3 292 aa5.88□□□□□ -1.47
PTPRD-213ENST00000537002 ATP8A1Q9Y2Q0 1164 aa5.88□□□□□ -1.47
PTPRD-213ENST00000537002 MBD4O95243 580 aa5.88□□□□□ -1.47
PTPRD-213ENST00000537002 BAG3O95817 575 aa5.88□□□□□ -1.47
PTPRD-213ENST00000537002 UQCRFS1P1P0C7P4 283 aa5.88□□□□□ -1.47
PTPRD-213ENST00000537002 ANXA13P27216 316 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms