RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 UBE4AQ14139 1066 aa17.23■□□□□ 0.35
CHFR-213ENST00000536843 SPA17Q15506 151 aa17.23■□□□□ 0.35
CHFR-213ENST00000536843 CCDC96Q2M329 555 aa17.23■□□□□ 0.35
CHFR-213ENST00000536843 KIRREL3Q8IZU9 778 aa17.23■□□□□ 0.35
CHFR-213ENST00000536843 CUL5Q93034 780 aa17.23■□□□□ 0.35
CHFR-213ENST00000536843 RNF41Q9H4P4 317 aaPredicted RBP17.23■□□□□ 0.35
CHFR-213ENST00000536843 NOD2Q9HC29 1040 aa17.23■□□□□ 0.35
CHFR-213ENST00000536843 COL1A1P02452 1464 aaPredicted RBP17.23■□□□□ 0.35
CHFR-213ENST00000536843 ERICH2A1L162 156 aa17.22■□□□□ 0.35
CHFR-213ENST00000536843 PAEPP09466 180 aa17.22■□□□□ 0.35
CHFR-213ENST00000536843 DYNLL1P63167 89 aaKnown RBP17.22■□□□□ 0.35
CHFR-213ENST00000536843 CDC37Q16543 378 aaPredicted RBP17.22■□□□□ 0.35
CHFR-213ENST00000536843 QPCTQ16769 361 aa17.22■□□□□ 0.35
CHFR-213ENST00000536843 TBC1D9BQ66K14 1250 aa17.22■□□□□ 0.35
CHFR-213ENST00000536843 CACNA2D3Q8IZS8 1091 aa17.22■□□□□ 0.35
CHFR-213ENST00000536843 CCT6BQ92526 530 aa17.22■□□□□ 0.35
CHFR-213ENST00000536843 CELF1Q92879 486 aaKnown RBP17.22■□□□□ 0.35
CHFR-213ENST00000536843 ALS2CR12Q96Q35 445 aa17.22■□□□□ 0.35
CHFR-213ENST00000536843 BLZF1Q9H2G9 400 aa17.22■□□□□ 0.35
CHFR-213ENST00000536843 THAP9Q9H5L6 903 aa17.22■□□□□ 0.35
CHFR-213ENST00000536843 SMARCAL1Q9NZC9 954 aa17.22■□□□□ 0.35
CHFR-213ENST00000536843 RNF14Q9UBS8 474 aa17.22■□□□□ 0.35
CHFR-213ENST00000536843 LAMB2P55268 1798 aa17.22■□□□□ 0.35
CHFR-213ENST00000536843 RASSF10A6NK89 507 aa17.22■□□□□ 0.35
CHFR-213ENST00000536843 HSPA9P38646 679 aaKnown RBP17.22■□□□□ 0.35
CHFR-213ENST00000536843 ACCSLQ4AC99 568 aa17.22■□□□□ 0.35
CHFR-213ENST00000536843 PDXDC2PQ6P474 469 aa17.22■□□□□ 0.35
CHFR-213ENST00000536843 PTF1AQ7RTS3 328 aa17.22■□□□□ 0.35
CHFR-213ENST00000536843 NUP133Q8WUM0 1156 aa17.22■□□□□ 0.35
CHFR-213ENST00000536843 STAMQ92783 540 aa17.22■□□□□ 0.35
CHFR-213ENST00000536843 FAM84BQ96KN1 310 aaPredicted RBP17.22■□□□□ 0.35
CHFR-213ENST00000536843 PYM1Q9BRP8 204 aaKnown RBP17.22■□□□□ 0.35
CHFR-213ENST00000536843 BCORQ6W2J9 1755 aa17.21■□□□□ 0.35
CHFR-213ENST00000536843 GOLGA6L10A6NI86 522 aa17.21■□□□□ 0.35
CHFR-213ENST00000536843 HEXIM1O94992 359 aaKnown RBP17.21■□□□□ 0.35
CHFR-213ENST00000536843 TRIM21P19474 475 aaKnown RBP17.21■□□□□ 0.35
CHFR-213ENST00000536843 PRCPP42785 496 aa17.21■□□□□ 0.35
CHFR-213ENST00000536843 SLMAPQ14BN4 828 aa17.21■□□□□ 0.35
CHFR-213ENST00000536843 FKBP15Q5T1M5 1219 aa17.21■□□□□ 0.35
CHFR-213ENST00000536843 AP1ARQ63HQ0 302 aa17.21■□□□□ 0.35
CHFR-213ENST00000536843 CRACR2BQ8N4Y2 399 aaPredicted RBP17.21■□□□□ 0.35
CHFR-213ENST00000536843 LMBR1Q8WVP7 490 aa17.21■□□□□ 0.35
CHFR-213ENST00000536843 RIOK1Q9BRS2 568 aaKnown RBP17.21■□□□□ 0.35
CHFR-213ENST00000536843 MLXIPQ9HAP2 919 aa17.21■□□□□ 0.35
CHFR-213ENST00000536843 EPB41L5Q9HCM4 733 aa17.21■□□□□ 0.35
CHFR-213ENST00000536843 PLCB1Q9NQ66 1216 aa17.21■□□□□ 0.35
CHFR-213ENST00000536843 EHD2Q9NZN4 543 aa17.21■□□□□ 0.35
CHFR-213ENST00000536843 PLAAQ9Y263 795 aa17.21■□□□□ 0.35
CHFR-213ENST00000536843 CHD4Q14839 1912 aa17.21■□□□□ 0.35
CHFR-213ENST00000536843 SKAP2O75563 359 aaPredicted RBP17.21■□□□□ 0.35
CHFR-213ENST00000536843 MOCS3O95396 460 aa17.21■□□□□ 0.35
CHFR-213ENST00000536843 RIPK1Q13546 671 aa17.21■□□□□ 0.35
CHFR-213ENST00000536843 CAVIN4Q5BKX8 364 aa17.21■□□□□ 0.35
CHFR-213ENST00000536843 ZNF654Q8IZM8 581 aa17.21■□□□□ 0.35
CHFR-213ENST00000536843 TMTC2Q8N394 836 aa17.21■□□□□ 0.35
CHFR-213ENST00000536843 FANCBQ8NB91 859 aa17.21■□□□□ 0.35
CHFR-213ENST00000536843 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.21■□□□□ 0.35
CHFR-213ENST00000536843 HVCN1Q96D96 273 aa17.21■□□□□ 0.35
CHFR-213ENST00000536843 SPDL1Q96EA4 605 aa17.21■□□□□ 0.35
CHFR-213ENST00000536843 CCDC42Q96M95 316 aa17.21■□□□□ 0.35
CHFR-213ENST00000536843 MTRQ99707 1265 aa17.21■□□□□ 0.35
CHFR-213ENST00000536843 HOMER3Q9NSC5 361 aa17.21■□□□□ 0.35
CHFR-213ENST00000536843 CICQ96RK0 1608 aaPredicted RBP17.21■□□□□ 0.35
CHFR-213ENST00000536843 CYP2D7A0A087X1C5 515 aa17.2■□□□□ 0.34
CHFR-213ENST00000536843 A0A1W2PQJ5 194 aa17.2■□□□□ 0.34
CHFR-213ENST00000536843 HPDP32754 393 aaPredicted RBP17.2■□□□□ 0.34
CHFR-213ENST00000536843 GUCY2DQ02846 1103 aa17.2■□□□□ 0.34
CHFR-213ENST00000536843 CFAP221Q4G0U5 840 aa17.2■□□□□ 0.34
CHFR-213ENST00000536843 FIGNQ5HY92 759 aa17.2■□□□□ 0.34
CHFR-213ENST00000536843 MSL1Q68DK7 614 aa17.2■□□□□ 0.34
CHFR-213ENST00000536843 ADSSL1Q8N142 457 aa17.2■□□□□ 0.34
CHFR-213ENST00000536843 ZNF384Q8TF68 577 aa17.2■□□□□ 0.34
CHFR-213ENST00000536843 NSMCE1Q8WV22 266 aa17.2■□□□□ 0.34
CHFR-213ENST00000536843 CCDC47Q96A33 483 aaKnown RBP17.2■□□□□ 0.34
CHFR-213ENST00000536843 UBAC1Q9BSL1 405 aa17.2■□□□□ 0.34
CHFR-213ENST00000536843 IFIH1Q9BYX4 1025 aaKnown RBP17.2■□□□□ 0.34
CHFR-213ENST00000536843 QTRT2Q9H974 415 aaKnown RBP17.2■□□□□ 0.34
CHFR-213ENST00000536843 EXOC1Q9NV70 894 aa17.2■□□□□ 0.34
CHFR-213ENST00000536843 ANAPC4Q9UJX5 808 aa17.2■□□□□ 0.34
CHFR-213ENST00000536843 PCDHA13Q9Y5I0 950 aa17.2■□□□□ 0.34
CHFR-213ENST00000536843 PES1O00541 588 aaKnown RBP17.2■□□□□ 0.34
CHFR-213ENST00000536843 PPIP5K2O43314 1243 aa17.2■□□□□ 0.34
CHFR-213ENST00000536843 BUB1BO60566 1050 aaPredicted RBP17.2■□□□□ 0.34
CHFR-213ENST00000536843 LCA5LO95447 670 aa17.2■□□□□ 0.34
CHFR-213ENST00000536843 RPN1P04843 607 aaKnown RBP17.2■□□□□ 0.34
CHFR-213ENST00000536843 KLRK1P26718 216 aa17.2■□□□□ 0.34
CHFR-213ENST00000536843 CXCR5P32302 372 aa17.2■□□□□ 0.34
CHFR-213ENST00000536843 MAATS1Q7Z4T9 603 aa17.2■□□□□ 0.34
CHFR-213ENST00000536843 IFT81Q8WYA0 676 aa17.2■□□□□ 0.34
CHFR-213ENST00000536843 MTA3Q9BTC8 594 aa17.2■□□□□ 0.34
CHFR-213ENST00000536843 TAF1P21675 1872 aa17.2■□□□□ 0.34
CHFR-213ENST00000536843 GCOM1H8Y6P7 765 aaPredicted RBP17.19■□□□□ 0.34
CHFR-213ENST00000536843 MYZAPP0CAP1 466 aa17.19■□□□□ 0.34
CHFR-213ENST00000536843 HNRNPH3P31942 346 aaKnown RBP17.19■□□□□ 0.34
CHFR-213ENST00000536843 GUCY2FP51841 1108 aa17.19■□□□□ 0.34
CHFR-213ENST00000536843 BIRC3Q13489 604 aa17.19■□□□□ 0.34
CHFR-213ENST00000536843 SEC23AQ15436 765 aa17.19■□□□□ 0.34
CHFR-213ENST00000536843 SLC10A5Q5PT55 438 aa17.19■□□□□ 0.34
CHFR-213ENST00000536843 CCHCR1Q8TD31 782 aa17.19■□□□□ 0.34
CHFR-213ENST00000536843 TLR10Q9BXR5 811 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms