RNA–Protein interactions for RNA: ENST00000536797.5

LPCAT3-204, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-204ENST00000536797 ST18O60284 1047 aa24.07■■□□□ 1.44
LPCAT3-204ENST00000536797 C6orf222P0C671 652 aaPredicted RBP24.07■■□□□ 1.44
LPCAT3-204ENST00000536797 HTATIP2Q9BUP3 242 aa24.07■■□□□ 1.44
LPCAT3-204ENST00000536797 AP5M1Q9H0R1 490 aa24.07■■□□□ 1.44
LPCAT3-204ENST00000536797 UPF3AQ9H1J1 476 aaKnown RBP24.07■■□□□ 1.44
LPCAT3-204ENST00000536797 SH3GLB2Q9NR46 395 aa24.07■■□□□ 1.44
LPCAT3-204ENST00000536797 PCDHA6Q9UN73 950 aa24.07■■□□□ 1.44
LPCAT3-204ENST00000536797 PCDHA8Q9Y5H6 950 aa24.07■■□□□ 1.44
LPCAT3-204ENST00000536797 NKRFO15226 690 aaKnown RBP eCLIP24.06■■□□□ 1.44
LPCAT3-204ENST00000536797 STAM2O75886 525 aa24.06■■□□□ 1.44
LPCAT3-204ENST00000536797 TXNP10599 105 aaKnown RBP24.06■■□□□ 1.44
LPCAT3-204ENST00000536797 COL6A1P12109 1028 aa24.06■■□□□ 1.44
LPCAT3-204ENST00000536797 GNA11P29992 359 aa24.06■■□□□ 1.44
LPCAT3-204ENST00000536797 VPS54Q9P1Q0 977 aa24.06■■□□□ 1.44
LPCAT3-204ENST00000536797 DYNC1LI2O43237 492 aaPredicted RBP24.05■■□□□ 1.44
LPCAT3-204ENST00000536797 FOSP01100 380 aaPredicted RBP24.05■■□□□ 1.44
LPCAT3-204ENST00000536797 CST5P28325 142 aaPredicted RBP24.05■■□□□ 1.44
LPCAT3-204ENST00000536797 AP3B2Q13367 1082 aa24.05■■□□□ 1.44
LPCAT3-204ENST00000536797 TMEM63BQ5T3F8 832 aa24.05■■□□□ 1.44
LPCAT3-204ENST00000536797 PCNX4Q63HM2 1172 aa24.05■■□□□ 1.44
LPCAT3-204ENST00000536797 XRRA1Q6P2D8 792 aa24.05■■□□□ 1.44
LPCAT3-204ENST00000536797 KLHDC9Q8NEP7 349 aa24.05■■□□□ 1.44
LPCAT3-204ENST00000536797 ZSCAN31Q96LW9 406 aaPredicted RBP24.05■■□□□ 1.44
LPCAT3-204ENST00000536797 SENP6Q9GZR1 1112 aaPredicted RBP24.05■■□□□ 1.44
LPCAT3-204ENST00000536797 CTDNEP1O95476 244 aa24.04■■□□□ 1.44
LPCAT3-204ENST00000536797 CLK2P49760 499 aaKnown RBP24.04■■□□□ 1.44
LPCAT3-204ENST00000536797 BICD2Q8TD16 824 aa24.04■■□□□ 1.44
LPCAT3-204ENST00000536797 TSEN34Q9BSV6 310 aaKnown RBP24.04■■□□□ 1.44
LPCAT3-204ENST00000536797 MRVI1Q9Y6F6 885 aa24.04■■□□□ 1.44
LPCAT3-204ENST00000536797 MYADML2A6NDP7 307 aa24.03■■□□□ 1.44
LPCAT3-204ENST00000536797 ARIH2O95376 493 aa24.03■■□□□ 1.44
LPCAT3-204ENST00000536797 PTGS1P23219 599 aa24.03■■□□□ 1.44
LPCAT3-204ENST00000536797 NLRP5P59047 1200 aa24.03■■□□□ 1.44
LPCAT3-204ENST00000536797 NKX3-2P78367 333 aa24.03■■□□□ 1.44
LPCAT3-204ENST00000536797 MRPS9P82933 396 aaKnown RBP24.03■■□□□ 1.44
LPCAT3-204ENST00000536797 GNPTABQ3T906 1256 aa24.03■■□□□ 1.44
LPCAT3-204ENST00000536797 GNASQ5JWF2 1037 aa24.03■■□□□ 1.44
LPCAT3-204ENST00000536797 KCNV1Q6PIU1 500 aa24.03■■□□□ 1.44
LPCAT3-204ENST00000536797 PCSK9Q8NBP7 692 aaKnown RBP24.03■■□□□ 1.44
LPCAT3-204ENST00000536797 ZFP91Q96JP5 570 aaPredicted RBP24.03■■□□□ 1.44
LPCAT3-204ENST00000536797 ANO3Q9BYT9 981 aa24.03■■□□□ 1.44
LPCAT3-204ENST00000536797 SH2B1Q9NRF2 756 aaPredicted RBP24.03■■□□□ 1.44
LPCAT3-204ENST00000536797 PHF24Q9UPV7 400 aa24.03■■□□□ 1.44
LPCAT3-204ENST00000536797 MOXD2PA6NHM9 499 aa24.02■■□□□ 1.44
LPCAT3-204ENST00000536797 TNRC18O15417 2968 aaPredicted RBP24.02■■□□□ 1.44
LPCAT3-204ENST00000536797 RGS20O76081 388 aa24.02■■□□□ 1.44
LPCAT3-204ENST00000536797 IRX5P78411 483 aaPredicted RBP24.02■■□□□ 1.44
LPCAT3-204ENST00000536797 KCNA10Q16322 511 aa24.02■■□□□ 1.44
LPCAT3-204ENST00000536797 MCTP2Q6DN12 878 aa24.02■■□□□ 1.44
LPCAT3-204ENST00000536797 CCDC62Q6P9F0 684 aa24.02■■□□□ 1.44
LPCAT3-204ENST00000536797 FAM177A1Q8N128 213 aaPredicted RBP24.02■■□□□ 1.44
LPCAT3-204ENST00000536797 REXO1Q8N1G1 1221 aaKnown RBP24.02■■□□□ 1.44
LPCAT3-204ENST00000536797 OR6J1Q8NGC5 347 aa24.02■■□□□ 1.44
LPCAT3-204ENST00000536797 WASF1Q92558 559 aa24.02■■□□□ 1.44
LPCAT3-204ENST00000536797 ORC3Q9UBD5 711 aaPredicted RBP24.02■■□□□ 1.44
LPCAT3-204ENST00000536797 XBP1P17861 261 aa24.01■■□□□ 1.43
LPCAT3-204ENST00000536797 FSCN1Q16658 493 aaKnown RBP24.01■■□□□ 1.43
LPCAT3-204ENST00000536797 LY6KQ17RY6 165 aa24.01■■□□□ 1.43
LPCAT3-204ENST00000536797 JAKMIP3Q5VZ66 844 aa24.01■■□□□ 1.43
LPCAT3-204ENST00000536797 CCSAPQ6IQ19 270 aaPredicted RBP24.01■■□□□ 1.43
LPCAT3-204ENST00000536797 NSUN7Q8NE18 718 aaKnown RBP24.01■■□□□ 1.43
LPCAT3-204ENST00000536797 COPS5Q92905 334 aa24.01■■□□□ 1.43
LPCAT3-204ENST00000536797 PGBD1Q96JS3 809 aa24.01■■□□□ 1.43
LPCAT3-204ENST00000536797 AIFM3Q96NN9 605 aa24.01■■□□□ 1.43
LPCAT3-204ENST00000536797 INPP4AQ96PE3 977 aaPredicted RBP24.01■■□□□ 1.43
LPCAT3-204ENST00000536797 TMEM260Q9NX78 707 aa24.01■■□□□ 1.43
LPCAT3-204ENST00000536797 RTEL1Q9NZ71 1219 aa24.01■■□□□ 1.43
LPCAT3-204ENST00000536797 DDX41Q9UJV9 622 aaKnown RBP24.01■■□□□ 1.43
LPCAT3-204ENST00000536797 CTAGE5O15320 804 aa24.01■■□□□ 1.43
LPCAT3-204ENST00000536797 ZEB2O60315 1214 aa24.01■■□□□ 1.43
LPCAT3-204ENST00000536797 ACLYP53396 1101 aa24.01■■□□□ 1.43
LPCAT3-204ENST00000536797 BEX3Q00994 111 aa24.01■■□□□ 1.43
LPCAT3-204ENST00000536797 ST3GAL1Q11201 340 aa24.01■■□□□ 1.43
LPCAT3-204ENST00000536797 CCDC83Q8IWF9 413 aa24.01■■□□□ 1.43
LPCAT3-204ENST00000536797 DPF3Q92784 378 aa24.01■■□□□ 1.43
LPCAT3-204ENST00000536797 FERMT2Q96AC1 680 aa24.01■■□□□ 1.43
LPCAT3-204ENST00000536797 DTNBO60941 627 aa24■■□□□ 1.43
LPCAT3-204ENST00000536797 GH1P01241 217 aa24■■□□□ 1.43
LPCAT3-204ENST00000536797 ASGR1P07306 291 aa24■■□□□ 1.43
LPCAT3-204ENST00000536797 TGFB3P10600 412 aa24■■□□□ 1.43
LPCAT3-204ENST00000536797 CPT1AP50416 773 aa24■■□□□ 1.43
LPCAT3-204ENST00000536797 NLRX1Q86UT6 975 aa24■■□□□ 1.43
LPCAT3-204ENST00000536797 A0A1W2PQ45 241 aaPredicted RBP23.99■■□□□ 1.43
LPCAT3-204ENST00000536797 A0A1W2PQY0 241 aa23.99■■□□□ 1.43
LPCAT3-204ENST00000536797 BRDTQ58F21 947 aaPredicted RBP23.99■■□□□ 1.43
LPCAT3-204ENST00000536797 PCDHA4Q9UN74 947 aa23.99■■□□□ 1.43
LPCAT3-204ENST00000536797 ALPK3Q96L96 1907 aa23.98■■□□□ 1.43
LPCAT3-204ENST00000536797 FIBPO43427 364 aa23.98■■□□□ 1.43
LPCAT3-204ENST00000536797 JAK2O60674 1132 aa23.98■■□□□ 1.43
LPCAT3-204ENST00000536797 FDPSP14324 419 aaKnown RBP23.98■■□□□ 1.43
LPCAT3-204ENST00000536797 ICAM3P32942 547 aa23.98■■□□□ 1.43
LPCAT3-204ENST00000536797 SREBF1P36956 1147 aa23.98■■□□□ 1.43
LPCAT3-204ENST00000536797 ATN1P54259 1190 aaPredicted RBP23.98■■□□□ 1.43
LPCAT3-204ENST00000536797 GALNT17Q6IS24 598 aa23.98■■□□□ 1.43
LPCAT3-204ENST00000536797 GLT1D1Q96MS3 346 aa23.98■■□□□ 1.43
LPCAT3-204ENST00000536797 LLPHQ9BRT6 129 aaKnown RBP23.98■■□□□ 1.43
LPCAT3-204ENST00000536797 ALG1Q9BT22 464 aa23.98■■□□□ 1.43
LPCAT3-204ENST00000536797 MYH7BA7E2Y1 1941 aa23.97■■□□□ 1.43
LPCAT3-204ENST00000536797 ADAMTS3O15072 1205 aa23.97■■□□□ 1.43
LPCAT3-204ENST00000536797 MCM2P49736 904 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms