RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 LY6KQ17RY6 165 aa20.63■□□□□ 0.89
TNFRSF1A-209ENST00000536717 FCHSD1Q86WN1 690 aa20.63■□□□□ 0.89
TNFRSF1A-209ENST00000536717 POLR3EQ9NVU0 708 aa20.63■□□□□ 0.89
TNFRSF1A-209ENST00000536717 SEC63Q9UGP8 760 aaKnown RBP20.63■□□□□ 0.89
TNFRSF1A-209ENST00000536717 TRIP12Q14669 1992 aaPredicted RBP20.62■□□□□ 0.89
TNFRSF1A-209ENST00000536717 HMGB1P09429 215 aaKnown RBP20.62■□□□□ 0.89
TNFRSF1A-209ENST00000536717 MYCLP12524 364 aaPredicted RBP20.62■□□□□ 0.89
TNFRSF1A-209ENST00000536717 CPA1P15085 419 aa20.62■□□□□ 0.89
TNFRSF1A-209ENST00000536717 VSIG10LQ86VR7 867 aa20.62■□□□□ 0.89
TNFRSF1A-209ENST00000536717 CCDC82Q8N4S0 544 aa20.62■□□□□ 0.89
TNFRSF1A-209ENST00000536717 DDX41Q9UJV9 622 aaKnown RBP20.62■□□□□ 0.89
TNFRSF1A-209ENST00000536717 FRMPD4Q14CM0 1322 aa20.61■□□□□ 0.89
TNFRSF1A-209ENST00000536717 hCG_1642624A0A1W2PR95 340 aa20.61■□□□□ 0.89
TNFRSF1A-209ENST00000536717 MYL3P08590 195 aa20.61■□□□□ 0.89
TNFRSF1A-209ENST00000536717 ARHGAP1Q07960 439 aa20.61■□□□□ 0.89
TNFRSF1A-209ENST00000536717 SYNE3Q6ZMZ3 975 aa20.61■□□□□ 0.89
TNFRSF1A-209ENST00000536717 UPF2Q9HAU5 1272 aaKnown RBP20.61■□□□□ 0.89
TNFRSF1A-209ENST00000536717 CNTNAP5Q8WYK1 1306 aa20.6■□□□□ 0.89
TNFRSF1A-209ENST00000536717 MEIS2O14770 477 aa20.6■□□□□ 0.89
TNFRSF1A-209ENST00000536717 TLR3O15455 904 aaKnown RBP20.6■□□□□ 0.89
TNFRSF1A-209ENST00000536717 TIMP1P01033 207 aa20.6■□□□□ 0.89
TNFRSF1A-209ENST00000536717 GH1P01241 217 aa20.6■□□□□ 0.89
TNFRSF1A-209ENST00000536717 BRDTQ58F21 947 aaPredicted RBP20.6■□□□□ 0.89
TNFRSF1A-209ENST00000536717 C9orf50Q5SZB4 431 aa20.6■□□□□ 0.89
TNFRSF1A-209ENST00000536717 JAKMIP1Q96N16 626 aaKnown RBP20.6■□□□□ 0.89
TNFRSF1A-209ENST00000536717 MTG1Q9BT17 334 aaPredicted RBP20.6■□□□□ 0.89
TNFRSF1A-209ENST00000536717 SEZ6LQ9BYH1 1024 aa20.6■□□□□ 0.89
TNFRSF1A-209ENST00000536717 BACH2Q9BYV9 841 aa20.6■□□□□ 0.89
TNFRSF1A-209ENST00000536717 ZBTB43O43298 467 aa20.59■□□□□ 0.89
TNFRSF1A-209ENST00000536717 B4GALT4O60513 344 aa20.59■□□□□ 0.89
TNFRSF1A-209ENST00000536717 EPHB4P54760 987 aa20.59■□□□□ 0.89
TNFRSF1A-209ENST00000536717 SHHQ15465 462 aa20.59■□□□□ 0.89
TNFRSF1A-209ENST00000536717 USP17L6PQ6QN14 398 aa20.59■□□□□ 0.89
TNFRSF1A-209ENST00000536717 AFG1LQ8WV93 481 aa20.59■□□□□ 0.89
TNFRSF1A-209ENST00000536717 ZFP91Q96JP5 570 aaPredicted RBP20.59■□□□□ 0.89
TNFRSF1A-209ENST00000536717 RBM28Q9NW13 759 aaKnown RBP20.59■□□□□ 0.89
TNFRSF1A-209ENST00000536717 MRVI1Q9Y6F6 885 aa20.59■□□□□ 0.89
TNFRSF1A-209ENST00000536717 KLF18A0A0U1RQI7 1052 aa20.58■□□□□ 0.89
TNFRSF1A-209ENST00000536717 PIK3CDO00329 1044 aa20.58■□□□□ 0.89
TNFRSF1A-209ENST00000536717 MMP3P08254 477 aa20.58■□□□□ 0.89
TNFRSF1A-209ENST00000536717 CCND2P30279 289 aa20.58■□□□□ 0.89
TNFRSF1A-209ENST00000536717 FUT2Q10981 343 aa20.58■□□□□ 0.89
TNFRSF1A-209ENST00000536717 RTN1Q16799 776 aa20.58■□□□□ 0.89
TNFRSF1A-209ENST00000536717 FAM217BQ9NTX9 383 aaPredicted RBP20.58■□□□□ 0.89
TNFRSF1A-209ENST00000536717 KPNA6O60684 536 aa20.58■□□□□ 0.88
TNFRSF1A-209ENST00000536717 MRPS9P82933 396 aaKnown RBP20.58■□□□□ 0.88
TNFRSF1A-209ENST00000536717 MFSD5Q6N075 450 aa20.58■□□□□ 0.88
TNFRSF1A-209ENST00000536717 BLOC1S2Q6QNY1 142 aa20.58■□□□□ 0.88
TNFRSF1A-209ENST00000536717 Q6ZUG5 572 aa20.58■□□□□ 0.88
TNFRSF1A-209ENST00000536717 SMARCC2Q8TAQ2 1214 aa20.58■□□□□ 0.88
TNFRSF1A-209ENST00000536717 EMID1Q96A84 441 aaPredicted RBP20.58■□□□□ 0.88
TNFRSF1A-209ENST00000536717 PPP1R12CQ9BZL4 782 aa20.58■□□□□ 0.88
TNFRSF1A-209ENST00000536717 TRPV6Q9H1D0 765 aa20.58■□□□□ 0.88
TNFRSF1A-209ENST00000536717 ALDH8A1Q9H2A2 487 aaPredicted RBP20.58■□□□□ 0.88
TNFRSF1A-209ENST00000536717 SCN5AQ14524 2016 aa20.57■□□□□ 0.88
TNFRSF1A-209ENST00000536717 CDC27P30260 824 aa20.57■□□□□ 0.88
TNFRSF1A-209ENST00000536717 RCAN1P53805 252 aa20.57■□□□□ 0.88
TNFRSF1A-209ENST00000536717 FPGSQ05932 587 aa20.57■□□□□ 0.88
TNFRSF1A-209ENST00000536717 NBPF20Q3BBV1 942 aa20.57■□□□□ 0.88
TNFRSF1A-209ENST00000536717 GPKOWQ92917 476 aaPredicted RBP eCLIP20.57■□□□□ 0.88
TNFRSF1A-209ENST00000536717 CUL5Q93034 780 aa20.57■□□□□ 0.88
TNFRSF1A-209ENST00000536717 GOLGA8AA7E2F4 631 aa20.56■□□□□ 0.88
TNFRSF1A-209ENST00000536717 GOLGA8BA8MQT2 603 aa20.56■□□□□ 0.88
TNFRSF1A-209ENST00000536717 SP2Q02086 613 aa20.56■□□□□ 0.88
TNFRSF1A-209ENST00000536717 APOBRQ0VD83 1088 aa20.56■□□□□ 0.88
TNFRSF1A-209ENST00000536717 KCNV1Q6PIU1 500 aa20.56■□□□□ 0.88
TNFRSF1A-209ENST00000536717 FBXL16Q8N461 479 aa20.56■□□□□ 0.88
TNFRSF1A-209ENST00000536717 PPP1R13LQ8WUF5 828 aa20.56■□□□□ 0.88
TNFRSF1A-209ENST00000536717 AGXT2Q9BYV1 514 aa20.56■□□□□ 0.88
TNFRSF1A-209ENST00000536717 UMODL1Q5DID0 1318 aa20.56■□□□□ 0.88
TNFRSF1A-209ENST00000536717 COL6A3P12111 3177 aa20.55■□□□□ 0.88
TNFRSF1A-209ENST00000536717 RPS6KB1P23443 525 aa20.55■□□□□ 0.88
TNFRSF1A-209ENST00000536717 ANAPC15P60006 121 aa20.55■□□□□ 0.88
TNFRSF1A-209ENST00000536717 FGD1P98174 961 aa20.55■□□□□ 0.88
TNFRSF1A-209ENST00000536717 MYSM1Q5VVJ2 828 aa20.55■□□□□ 0.88
TNFRSF1A-209ENST00000536717 GPR153Q6NV75 609 aa20.55■□□□□ 0.88
TNFRSF1A-209ENST00000536717 KAT2BQ92831 832 aa20.55■□□□□ 0.88
TNFRSF1A-209ENST00000536717 BRF1Q92994 677 aa20.55■□□□□ 0.88
TNFRSF1A-209ENST00000536717 PSTPIP2Q9H939 334 aa20.55■□□□□ 0.88
TNFRSF1A-209ENST00000536717 TRMT13Q9NUP7 481 aaKnown RBP20.55■□□□□ 0.88
TNFRSF1A-209ENST00000536717 TGFB3P10600 412 aa20.54■□□□□ 0.88
TNFRSF1A-209ENST00000536717 CASTP20810 708 aaKnown RBP20.54■□□□□ 0.88
TNFRSF1A-209ENST00000536717 UBA1P22314 1058 aaKnown RBP20.54■□□□□ 0.88
TNFRSF1A-209ENST00000536717 PSMA5P28066 241 aa20.54■□□□□ 0.88
TNFRSF1A-209ENST00000536717 CYP2C18P33260 490 aa20.54■□□□□ 0.88
TNFRSF1A-209ENST00000536717 LAMC2Q13753 1193 aa20.54■□□□□ 0.88
TNFRSF1A-209ENST00000536717 WWC2Q6AWC2 1192 aa20.54■□□□□ 0.88
TNFRSF1A-209ENST00000536717 TYW1BQ6NUM6 668 aa20.54■□□□□ 0.88
TNFRSF1A-209ENST00000536717 NFRKBQ6P4R8 1299 aa20.54■□□□□ 0.88
TNFRSF1A-209ENST00000536717 HEATR3Q7Z4Q2 680 aa20.54■□□□□ 0.88
TNFRSF1A-209ENST00000536717 DHX37Q8IY37 1157 aaKnown RBP20.54■□□□□ 0.88
TNFRSF1A-209ENST00000536717 TET1Q8NFU7 2136 aa20.54■□□□□ 0.88
TNFRSF1A-209ENST00000536717 INPP4AQ96PE3 977 aaPredicted RBP20.54■□□□□ 0.88
TNFRSF1A-209ENST00000536717 NOC4LQ9BVI4 516 aaKnown RBP20.54■□□□□ 0.88
TNFRSF1A-209ENST00000536717 C22orf23Q9BZE7 217 aa20.54■□□□□ 0.88
TNFRSF1A-209ENST00000536717 HIPK3Q9H422 1215 aa20.54■□□□□ 0.88
TNFRSF1A-209ENST00000536717 TANC1Q9C0D5 1861 aa20.54■□□□□ 0.88
TNFRSF1A-209ENST00000536717 KAT6AQ92794 2004 aa20.54■□□□□ 0.88
TNFRSF1A-209ENST00000536717 STAM2O75886 525 aa20.53■□□□□ 0.88
TNFRSF1A-209ENST00000536717 GGPS1O95749 300 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms