RNA–Protein interactions for RNA: ENST00000536625.1

KNTC1-209, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 1,178 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-209ENST00000536625 THBDP07204 575 aa6.2□□□□□ -1.42
KNTC1-209ENST00000536625 FBLN1P23142 703 aa6.2□□□□□ -1.42
KNTC1-209ENST00000536625 GRIA2P42262 883 aa6.2□□□□□ -1.42
KNTC1-209ENST00000536625 SERINC3Q13530 473 aa6.2□□□□□ -1.42
KNTC1-209ENST00000536625 DENND5AQ6IQ26 1287 aa6.2□□□□□ -1.42
KNTC1-209ENST00000536625 EEPD1Q7L9B9 569 aa6.2□□□□□ -1.42
KNTC1-209ENST00000536625 FNIP1Q8TF40 1166 aa6.2□□□□□ -1.42
KNTC1-209ENST00000536625 ARMC5Q96C12 935 aa6.2□□□□□ -1.42
KNTC1-209ENST00000536625 CHMP4BQ9H444 224 aaKnown RBP6.2□□□□□ -1.42
KNTC1-209ENST00000536625 FBLN5Q9UBX5 448 aa6.2□□□□□ -1.42
KNTC1-209ENST00000536625 NOP58Q9Y2X3 529 aaKnown RBP6.2□□□□□ -1.42
KNTC1-209ENST00000536625 R3HCC1Q9Y3T6 440 aaKnown RBP6.2□□□□□ -1.42
KNTC1-209ENST00000536625 FSHBP01225 129 aa6.19□□□□□ -1.42
KNTC1-209ENST00000536625 PLS3P13797 630 aa6.19□□□□□ -1.42
KNTC1-209ENST00000536625 ATF2P15336 505 aa6.19□□□□□ -1.42
KNTC1-209ENST00000536625 L1CAMP32004 1257 aa6.19□□□□□ -1.42
KNTC1-209ENST00000536625 GTF2F1P35269 517 aaKnown RBP eCLIP6.19□□□□□ -1.42
KNTC1-209ENST00000536625 MAPKAPK2P49137 400 aa6.19□□□□□ -1.42
KNTC1-209ENST00000536625 SEPHS1P49903 392 aa6.19□□□□□ -1.42
KNTC1-209ENST00000536625 DLX2Q07687 328 aaPredicted RBP6.19□□□□□ -1.42
KNTC1-209ENST00000536625 HSP90AA2PQ14568 343 aaPredicted RBP6.19□□□□□ -1.42
KNTC1-209ENST00000536625 CPNE8Q86YQ8 564 aa6.19□□□□□ -1.42
KNTC1-209ENST00000536625 CRACR2BQ8N4Y2 399 aaPredicted RBP6.19□□□□□ -1.42
KNTC1-209ENST00000536625 ZNF526Q8TF50 670 aaPredicted RBP6.19□□□□□ -1.42
KNTC1-209ENST00000536625 DDX1Q92499 740 aaKnown RBP6.19□□□□□ -1.42
KNTC1-209ENST00000536625 PPP1R14AQ96A00 147 aa6.19□□□□□ -1.42
KNTC1-209ENST00000536625 C1orf159Q96HA4 380 aa6.19□□□□□ -1.42
KNTC1-209ENST00000536625 SMPD4Q9NXE4 827 aa6.19□□□□□ -1.42
KNTC1-209ENST00000536625 CLEC1BQ9P126 229 aa6.19□□□□□ -1.42
KNTC1-209ENST00000536625 TMEFF2Q9UIK5 374 aaPredicted RBP6.19□□□□□ -1.42
KNTC1-209ENST00000536625 PRDM4Q9UKN5 801 aa6.19□□□□□ -1.42
KNTC1-209ENST00000536625 WASHC2AQ641Q2 1341 aa6.19□□□□□ -1.42
KNTC1-209ENST00000536625 C7orf72A4D263 438 aa6.18□□□□□ -1.42
KNTC1-209ENST00000536625 ITGB3P05106 788 aa6.18□□□□□ -1.42
KNTC1-209ENST00000536625 CNR2P34972 360 aa6.18□□□□□ -1.42
KNTC1-209ENST00000536625 CORO7P57737 925 aa6.18□□□□□ -1.42
KNTC1-209ENST00000536625 HTRA3P83110 453 aa6.18□□□□□ -1.42
KNTC1-209ENST00000536625 INF2Q27J81 1249 aa6.18□□□□□ -1.42
KNTC1-209ENST00000536625 ZC3H14Q6PJT7 736 aaKnown RBP6.18□□□□□ -1.42
KNTC1-209ENST00000536625 CCDC103Q8IW40 242 aa6.18□□□□□ -1.42
KNTC1-209ENST00000536625 TEX2Q8IWB9 1127 aa6.18□□□□□ -1.42
KNTC1-209ENST00000536625 CKAP2LQ8IYA6 745 aa6.18□□□□□ -1.42
KNTC1-209ENST00000536625 NLGN1Q8N2Q7 840 aa6.18□□□□□ -1.42
KNTC1-209ENST00000536625 FAM43AQ8N2R8 423 aa6.18□□□□□ -1.42
KNTC1-209ENST00000536625 DPF3Q92784 378 aa6.18□□□□□ -1.42
KNTC1-209ENST00000536625 RBM15Q96T37 977 aaKnown RBP eCLIP6.18□□□□□ -1.42
KNTC1-209ENST00000536625 MMP19Q99542 508 aa6.18□□□□□ -1.42
KNTC1-209ENST00000536625 MTA3Q9BTC8 594 aa6.18□□□□□ -1.42
KNTC1-209ENST00000536625 SCAND2PQ9GZW5 306 aaPredicted RBP6.18□□□□□ -1.42
KNTC1-209ENST00000536625 PDLIM7Q9NR12 457 aa6.18□□□□□ -1.42
KNTC1-209ENST00000536625 SHROOM4Q9ULL8 1493 aa6.17□□□□□ -1.42
KNTC1-209ENST00000536625 NPHP3-ACAD11A0A0J9YXS1 232 aa6.17□□□□□ -1.42
KNTC1-209ENST00000536625 NOBOXO60393 691 aa6.17□□□□□ -1.42
KNTC1-209ENST00000536625 PFKLP17858 780 aa6.17□□□□□ -1.42
KNTC1-209ENST00000536625 PAMP19021 973 aa6.17□□□□□ -1.42
KNTC1-209ENST00000536625 HOXC12P31275 282 aa6.17□□□□□ -1.42
KNTC1-209ENST00000536625 GFRA1P56159 465 aa6.17□□□□□ -1.42
KNTC1-209ENST00000536625 PPP2R2AP63151 447 aa6.17□□□□□ -1.42
KNTC1-209ENST00000536625 IRX6P78412 446 aaPredicted RBP6.17□□□□□ -1.42
KNTC1-209ENST00000536625 FOXO4P98177 505 aa6.17□□□□□ -1.42
KNTC1-209ENST00000536625 CALD1Q05682 793 aaKnown RBP6.17□□□□□ -1.42
KNTC1-209ENST00000536625 TESK1Q15569 626 aa6.17□□□□□ -1.42
KNTC1-209ENST00000536625 PRSS53Q2L4Q9 553 aa6.17□□□□□ -1.42
KNTC1-209ENST00000536625 NBPF6Q5VWK0 638 aa6.17□□□□□ -1.42
KNTC1-209ENST00000536625 SAPCD2Q86UD0 394 aa6.17□□□□□ -1.42
KNTC1-209ENST00000536625 JAMLQ86YT9 394 aa6.17□□□□□ -1.42
KNTC1-209ENST00000536625 ST13P5Q8NFI4 369 aaPredicted RBP6.17□□□□□ -1.42
KNTC1-209ENST00000536625 NBPF4Q96M43 638 aa6.17□□□□□ -1.42
KNTC1-209ENST00000536625 CCDC113Q9H0I3 377 aa6.17□□□□□ -1.42
KNTC1-209ENST00000536625 SRRDQ9UH36 339 aa6.17□□□□□ -1.42
KNTC1-209ENST00000536625 CANXP27824 592 aaKnown RBP6.16□□□□□ -1.42
KNTC1-209ENST00000536625 SLC35F1Q5T1Q4 408 aa6.16□□□□□ -1.42
KNTC1-209ENST00000536625 SPATC1Q76KD6 591 aa6.16□□□□□ -1.42
KNTC1-209ENST00000536625 FTSJ3Q8IY81 847 aaKnown RBP6.16□□□□□ -1.42
KNTC1-209ENST00000536625 TMEM145Q8NBT3 493 aa6.16□□□□□ -1.42
KNTC1-209ENST00000536625 SGSM3Q96HU1 749 aa6.16□□□□□ -1.42
KNTC1-209ENST00000536625 SORCS2Q96PQ0 1159 aa6.16□□□□□ -1.42
KNTC1-209ENST00000536625 HIRIP3Q9BW71 556 aaPredicted RBP6.16□□□□□ -1.42
KNTC1-209ENST00000536625 ARHGEF4Q9NR80 690 aa6.16□□□□□ -1.42
KNTC1-209ENST00000536625 LRP2BPQ9P2M1 347 aa6.16□□□□□ -1.42
KNTC1-209ENST00000536625 PMF1-BGLAPU3KQ54 211 aa6.16□□□□□ -1.42
KNTC1-209ENST00000536625 SH3D21A4FU49 640 aa6.15□□□□□ -1.42
KNTC1-209ENST00000536625 DBHP09172 617 aa6.15□□□□□ -1.42
KNTC1-209ENST00000536625 GLI4P10075 376 aa6.15□□□□□ -1.42
KNTC1-209ENST00000536625 TACR1P25103 407 aa6.15□□□□□ -1.42
KNTC1-209ENST00000536625 RASGRF1Q13972 1273 aa6.15□□□□□ -1.42
KNTC1-209ENST00000536625 PLEKHO2Q8TD55 490 aa6.15□□□□□ -1.42
KNTC1-209ENST00000536625 SECISBP2LQ93073 1101 aaKnown RBP6.15□□□□□ -1.42
KNTC1-209ENST00000536625 ZNF669Q96BR6 464 aaPredicted RBP6.15□□□□□ -1.42
KNTC1-209ENST00000536625 CCDC140Q96MF4 163 aa6.15□□□□□ -1.42
KNTC1-209ENST00000536625 TRIM55Q9BYV6 548 aa6.15□□□□□ -1.42
KNTC1-209ENST00000536625 LNPKQ9C0E8 428 aa6.15□□□□□ -1.42
KNTC1-209ENST00000536625 SIRPGQ9P1W8 387 aa6.15□□□□□ -1.42
KNTC1-209ENST00000536625 TRBV23OR9-2A0A075B6M9 112 aa6.14□□□□□ -1.43
KNTC1-209ENST00000536625 FAM221BA6H8Z2 402 aa6.14□□□□□ -1.43
KNTC1-209ENST00000536625 C1QTNF3-AMACRE9PGA6 284 aa6.14□□□□□ -1.43
KNTC1-209ENST00000536625 PDPK1O15530 556 aa6.14□□□□□ -1.43
KNTC1-209ENST00000536625 SRGAP3O43295 1099 aa6.14□□□□□ -1.43
KNTC1-209ENST00000536625 ADCY3O60266 1144 aa6.14□□□□□ -1.43
KNTC1-209ENST00000536625 DLX3O60479 287 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms