RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 PGM5Q15124 567 aa16.54■□□□□ 0.24
RTN3P1-201ENST00000536295 PSRC1Q6PGN9 363 aaPredicted RBP16.54■□□□□ 0.24
RTN3P1-201ENST00000536295 SLC17A8Q8NDX2 589 aa16.54■□□□□ 0.24
RTN3P1-201ENST00000536295 IL31RAQ8NI17 732 aa16.54■□□□□ 0.24
RTN3P1-201ENST00000536295 SCLYQ96I15 445 aa16.54■□□□□ 0.24
RTN3P1-201ENST00000536295 TMEM87BQ96K49 555 aa16.54■□□□□ 0.24
RTN3P1-201ENST00000536295 WNT8AQ9H1J5 351 aa16.54■□□□□ 0.24
RTN3P1-201ENST00000536295 IL23AQ9NPF7 189 aa16.54■□□□□ 0.24
RTN3P1-201ENST00000536295 DDX41Q9UJV9 622 aaKnown RBP16.54■□□□□ 0.24
RTN3P1-201ENST00000536295 BAZ2BQ9UIF8 2168 aaKnown RBP16.54■□□□□ 0.24
RTN3P1-201ENST00000536295 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.53■□□□□ 0.24
RTN3P1-201ENST00000536295 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.53■□□□□ 0.24
RTN3P1-201ENST00000536295 PLEKHA8P1O95397 391 aa16.53■□□□□ 0.24
RTN3P1-201ENST00000536295 SUPT20HL2P0C7V6 817 aa16.53■□□□□ 0.24
RTN3P1-201ENST00000536295 CMTR1Q8N1G2 835 aaKnown RBP16.53■□□□□ 0.24
RTN3P1-201ENST00000536295 TMTC2Q8N394 836 aa16.53■□□□□ 0.24
RTN3P1-201ENST00000536295 SAMD3Q8N6K7 520 aa16.53■□□□□ 0.24
RTN3P1-201ENST00000536295 RRP36Q96EU6 259 aaKnown RBP16.53■□□□□ 0.24
RTN3P1-201ENST00000536295 MAP3K14Q99558 947 aa16.53■□□□□ 0.24
RTN3P1-201ENST00000536295 MTA3Q9BTC8 594 aa16.53■□□□□ 0.24
RTN3P1-201ENST00000536295 TTYH1Q9H313 450 aaPredicted RBP16.53■□□□□ 0.24
RTN3P1-201ENST00000536295 SEMA6BQ9H3T3 888 aa16.53■□□□□ 0.24
RTN3P1-201ENST00000536295 GRXCR1A8MXD5 290 aa16.52■□□□□ 0.24
RTN3P1-201ENST00000536295 RGS20O76081 388 aa16.52■□□□□ 0.24
RTN3P1-201ENST00000536295 FGBP02675 491 aa16.52■□□□□ 0.24
RTN3P1-201ENST00000536295 RNF20Q5VTR2 975 aa16.52■□□□□ 0.24
RTN3P1-201ENST00000536295 NFRKBQ6P4R8 1299 aa16.52■□□□□ 0.24
RTN3P1-201ENST00000536295 DHX37Q8IY37 1157 aaKnown RBP16.52■□□□□ 0.24
RTN3P1-201ENST00000536295 CDX2Q99626 313 aaPredicted RBP16.52■□□□□ 0.24
RTN3P1-201ENST00000536295 SPZ1Q9BXG8 430 aa16.52■□□□□ 0.24
RTN3P1-201ENST00000536295 SEC63Q9UGP8 760 aaKnown RBP16.52■□□□□ 0.24
RTN3P1-201ENST00000536295 NOD1Q9Y239 953 aa16.52■□□□□ 0.24
RTN3P1-201ENST00000536295 KIAA1217Q5T5P2 1943 aa16.51■□□□□ 0.23
RTN3P1-201ENST00000536295 CDC45O75419 566 aa16.51■□□□□ 0.23
RTN3P1-201ENST00000536295 CASTP20810 708 aaKnown RBP16.51■□□□□ 0.23
RTN3P1-201ENST00000536295 DNAJB2P25686 324 aa16.51■□□□□ 0.23
RTN3P1-201ENST00000536295 CCND2P30279 289 aa16.51■□□□□ 0.23
RTN3P1-201ENST00000536295 DGKDQ16760 1214 aa16.51■□□□□ 0.23
RTN3P1-201ENST00000536295 OTOP2Q7RTS6 562 aa16.51■□□□□ 0.23
RTN3P1-201ENST00000536295 VSIG10LQ86VR7 867 aa16.51■□□□□ 0.23
RTN3P1-201ENST00000536295 SRBD1Q8N5C6 995 aaKnown RBP16.51■□□□□ 0.23
RTN3P1-201ENST00000536295 CCDC136Q96JN2 1154 aa16.51■□□□□ 0.23
RTN3P1-201ENST00000536295 LZTS2Q9BRK4 669 aa16.51■□□□□ 0.23
RTN3P1-201ENST00000536295 SLC12A7Q9Y666 1083 aa16.51■□□□□ 0.23
RTN3P1-201ENST00000536295 COL6A3P12111 3177 aa16.51■□□□□ 0.23
RTN3P1-201ENST00000536295 SCN10AQ9Y5Y9 1956 aa16.51■□□□□ 0.23
RTN3P1-201ENST00000536295 hCG_1642624A0A1W2PR95 340 aa16.5■□□□□ 0.23
RTN3P1-201ENST00000536295 CALM1P0DP23 149 aa16.5■□□□□ 0.23
RTN3P1-201ENST00000536295 CALM2P0DP24 149 aa16.5■□□□□ 0.23
RTN3P1-201ENST00000536295 CALM3P0DP25 149 aa16.5■□□□□ 0.23
RTN3P1-201ENST00000536295 LIFRP42702 1097 aa16.5■□□□□ 0.23
RTN3P1-201ENST00000536295 GNAQP50148 359 aa16.5■□□□□ 0.23
RTN3P1-201ENST00000536295 LAMC2Q13753 1193 aa16.5■□□□□ 0.23
RTN3P1-201ENST00000536295 RASIP1Q5U651 963 aa16.5■□□□□ 0.23
RTN3P1-201ENST00000536295 DEFB128Q7Z7B8 93 aa16.5■□□□□ 0.23
RTN3P1-201ENST00000536295 CCDC82Q8N4S0 544 aa16.5■□□□□ 0.23
RTN3P1-201ENST00000536295 SMARCC2Q8TAQ2 1214 aa16.5■□□□□ 0.23
RTN3P1-201ENST00000536295 HERVK_113Q902F9 699 aa16.5■□□□□ 0.23
RTN3P1-201ENST00000536295 KAT2BQ92831 832 aa16.5■□□□□ 0.23
RTN3P1-201ENST00000536295 GPKOWQ92917 476 aaPredicted RBP eCLIP16.5■□□□□ 0.23
RTN3P1-201ENST00000536295 TCEANC2Q96MN5 208 aa16.5■□□□□ 0.23
RTN3P1-201ENST00000536295 NEK1Q96PY6 1258 aa16.5■□□□□ 0.23
RTN3P1-201ENST00000536295 ALG1Q9BT22 464 aa16.5■□□□□ 0.23
RTN3P1-201ENST00000536295 CXXC1Q9P0U4 656 aaPredicted RBP16.5■□□□□ 0.23
RTN3P1-201ENST00000536295 GGPS1O95749 300 aa16.49■□□□□ 0.23
RTN3P1-201ENST00000536295 ZNF286BP0CG31 522 aa16.49■□□□□ 0.23
RTN3P1-201ENST00000536295 SMARCA1P28370 1054 aa16.49■□□□□ 0.23
RTN3P1-201ENST00000536295 PBX2P40425 430 aa16.49■□□□□ 0.23
RTN3P1-201ENST00000536295 PTPN11Q06124 597 aaPredicted RBP16.49■□□□□ 0.23
RTN3P1-201ENST00000536295 PTGISQ16647 500 aa16.49■□□□□ 0.23
RTN3P1-201ENST00000536295 KCNV1Q6PIU1 500 aa16.49■□□□□ 0.23
RTN3P1-201ENST00000536295 USP17L6PQ6QN14 398 aa16.49■□□□□ 0.23
RTN3P1-201ENST00000536295 MICU3Q86XE3 530 aa16.49■□□□□ 0.23
RTN3P1-201ENST00000536295 RPUSD2Q8IZ73 545 aaKnown RBP16.49■□□□□ 0.23
RTN3P1-201ENST00000536295 PPTC7Q8NI37 304 aa16.49■□□□□ 0.23
RTN3P1-201ENST00000536295 MYLIPQ8WY64 445 aa16.49■□□□□ 0.23
RTN3P1-201ENST00000536295 CUL5Q93034 780 aa16.49■□□□□ 0.23
RTN3P1-201ENST00000536295 EMID1Q96A84 441 aaPredicted RBP16.49■□□□□ 0.23
RTN3P1-201ENST00000536295 TIFAQ96CG3 184 aa16.49■□□□□ 0.23
RTN3P1-201ENST00000536295 SPATA33Q96N06 139 aa16.49■□□□□ 0.23
RTN3P1-201ENST00000536295 MTIF3Q9H2K0 278 aaKnown RBP16.49■□□□□ 0.23
RTN3P1-201ENST00000536295 ZBBXA8MT70 800 aa16.48■□□□□ 0.23
RTN3P1-201ENST00000536295 UBA1P22314 1058 aaKnown RBP16.48■□□□□ 0.23
RTN3P1-201ENST00000536295 PSEN2P49810 448 aa16.48■□□□□ 0.23
RTN3P1-201ENST00000536295 SP2Q02086 613 aa16.48■□□□□ 0.23
RTN3P1-201ENST00000536295 CELF3Q5SZQ8 465 aaKnown RBP16.48■□□□□ 0.23
RTN3P1-201ENST00000536295 MYSM1Q5VVJ2 828 aa16.48■□□□□ 0.23
RTN3P1-201ENST00000536295 GDF6Q6KF10 455 aaPredicted RBP16.48■□□□□ 0.23
RTN3P1-201ENST00000536295 SYNE3Q6ZMZ3 975 aa16.48■□□□□ 0.23
RTN3P1-201ENST00000536295 RASEFQ8IZ41 740 aa16.48■□□□□ 0.23
RTN3P1-201ENST00000536295 FANCBQ8NB91 859 aa16.48■□□□□ 0.23
RTN3P1-201ENST00000536295 RETREG2Q8NC44 543 aa16.48■□□□□ 0.23
RTN3P1-201ENST00000536295 PBX4Q9BYU1 374 aa16.48■□□□□ 0.23
RTN3P1-201ENST00000536295 MLXIPQ9HAP2 919 aa16.48■□□□□ 0.23
RTN3P1-201ENST00000536295 RTEL1Q9NZ71 1219 aa16.48■□□□□ 0.23
RTN3P1-201ENST00000536295 TMEM265A0A087WTH1 108 aa16.47■□□□□ 0.23
RTN3P1-201ENST00000536295 MRPS9P82933 396 aaKnown RBP16.47■□□□□ 0.23
RTN3P1-201ENST00000536295 BFSP2Q13515 415 aa16.47■□□□□ 0.23
RTN3P1-201ENST00000536295 MFSD10Q14728 455 aa16.47■□□□□ 0.23
RTN3P1-201ENST00000536295 ADCK5Q3MIX3 580 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms