RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 TRIM22Q8IYM9 498 aa25.52■■□□□ 1.68
VPS37C-202ENST00000535818 SLKQ9H2G2 1235 aaPredicted RBP25.52■■□□□ 1.68
VPS37C-202ENST00000535818 SPDYE3A6NKU9 549 aa25.51■■□□□ 1.67
VPS37C-202ENST00000535818 ZEB2O60315 1214 aa25.51■■□□□ 1.67
VPS37C-202ENST00000535818 ASGR1P07306 291 aa25.51■■□□□ 1.67
VPS37C-202ENST00000535818 TYW1BQ6NUM6 668 aa25.51■■□□□ 1.67
VPS37C-202ENST00000535818 VSIG10LQ86VR7 867 aa25.51■■□□□ 1.67
VPS37C-202ENST00000535818 UPF2Q9HAU5 1272 aaKnown RBP25.51■■□□□ 1.67
VPS37C-202ENST00000535818 STARD7Q9NQZ5 370 aa25.51■■□□□ 1.67
VPS37C-202ENST00000535818 MRVI1Q9Y6F6 885 aa25.51■■□□□ 1.67
VPS37C-202ENST00000535818 FRMPD4Q14CM0 1322 aa25.51■■□□□ 1.67
VPS37C-202ENST00000535818 SMCO2A6NFE2 343 aa25.5■■□□□ 1.67
VPS37C-202ENST00000535818 NKX3-2P78367 333 aa25.5■■□□□ 1.67
VPS37C-202ENST00000535818 KIAA1217Q5T5P2 1943 aa25.5■■□□□ 1.67
VPS37C-202ENST00000535818 CCSAPQ6IQ19 270 aaPredicted RBP25.5■■□□□ 1.67
VPS37C-202ENST00000535818 SLC39A5Q6ZMH5 540 aa25.5■■□□□ 1.67
VPS37C-202ENST00000535818 CCDC12Q8WUD4 166 aaPredicted RBP25.5■■□□□ 1.67
VPS37C-202ENST00000535818 VTI1AQ96AJ9 217 aa25.5■■□□□ 1.67
VPS37C-202ENST00000535818 GLT1D1Q96MS3 346 aa25.5■■□□□ 1.67
VPS37C-202ENST00000535818 C22orf23Q9BZE7 217 aa25.5■■□□□ 1.67
VPS37C-202ENST00000535818 EHMT1Q9H9B1 1298 aa25.5■■□□□ 1.67
VPS37C-202ENST00000535818 RIC8AQ9NPQ8 531 aa25.5■■□□□ 1.67
VPS37C-202ENST00000535818 TPCN1Q9ULQ1 816 aa25.5■■□□□ 1.67
VPS37C-202ENST00000535818 CTAGE5O15320 804 aa25.49■■□□□ 1.67
VPS37C-202ENST00000535818 ARIH2O95376 493 aa25.49■■□□□ 1.67
VPS37C-202ENST00000535818 RTP1P59025 263 aa25.49■■□□□ 1.67
VPS37C-202ENST00000535818 SSRP1Q08945 709 aaKnown RBP25.49■■□□□ 1.67
VPS37C-202ENST00000535818 BRDTQ58F21 947 aaPredicted RBP25.49■■□□□ 1.67
VPS37C-202ENST00000535818 COPS5Q92905 334 aa25.49■■□□□ 1.67
VPS37C-202ENST00000535818 ZFP91Q96JP5 570 aaPredicted RBP25.49■■□□□ 1.67
VPS37C-202ENST00000535818 GLT8D2Q9H1C3 349 aa25.49■■□□□ 1.67
VPS37C-202ENST00000535818 ATP11BQ9Y2G3 1177 aa25.49■■□□□ 1.67
VPS37C-202ENST00000535818 H0YGN5 161 aa25.48■■□□□ 1.67
VPS37C-202ENST00000535818 CPT1AP50416 773 aa25.48■■□□□ 1.67
VPS37C-202ENST00000535818 PKN1Q16512 942 aa25.48■■□□□ 1.67
VPS37C-202ENST00000535818 LY6KQ17RY6 165 aa25.48■■□□□ 1.67
VPS37C-202ENST00000535818 GNPTABQ3T906 1256 aa25.48■■□□□ 1.67
VPS37C-202ENST00000535818 CCDC62Q6P9F0 684 aa25.48■■□□□ 1.67
VPS37C-202ENST00000535818 STAM2O75886 525 aa25.47■■□□□ 1.67
VPS37C-202ENST00000535818 CDKL5O76039 1030 aa25.47■■□□□ 1.67
VPS37C-202ENST00000535818 GH1P01241 217 aa25.47■■□□□ 1.67
VPS37C-202ENST00000535818 SCRN1Q12765 414 aa25.47■■□□□ 1.67
VPS37C-202ENST00000535818 TEX2Q8IWB9 1127 aa25.47■■□□□ 1.67
VPS37C-202ENST00000535818 PCDHA6Q9UN73 950 aa25.47■■□□□ 1.67
VPS37C-202ENST00000535818 PCDHA8Q9Y5H6 950 aa25.47■■□□□ 1.67
VPS37C-202ENST00000535818 PFKFB2O60825 505 aa25.46■■□□□ 1.67
VPS37C-202ENST00000535818 TRIM60Q495X7 471 aa25.46■■□□□ 1.67
VPS37C-202ENST00000535818 PCNX4Q63HM2 1172 aa25.46■■□□□ 1.67
VPS37C-202ENST00000535818 XRRA1Q6P2D8 792 aa25.46■■□□□ 1.67
VPS37C-202ENST00000535818 KCNV1Q6PIU1 500 aa25.46■■□□□ 1.67
VPS37C-202ENST00000535818 CCDC148Q8NFR7 591 aa25.46■■□□□ 1.67
VPS37C-202ENST00000535818 C6orf50Q9HD87 102 aa25.46■■□□□ 1.67
VPS37C-202ENST00000535818 ELP1O95163 1332 aa25.45■■□□□ 1.66
VPS37C-202ENST00000535818 CABYRO75952 493 aa25.45■■□□□ 1.66
VPS37C-202ENST00000535818 RGS20O76081 388 aa25.45■■□□□ 1.66
VPS37C-202ENST00000535818 DEXIO95424 95 aa25.45■■□□□ 1.66
VPS37C-202ENST00000535818 MRPS9P82933 396 aaKnown RBP25.45■■□□□ 1.66
VPS37C-202ENST00000535818 SNX17Q15036 470 aa25.45■■□□□ 1.66
VPS37C-202ENST00000535818 CXCL17Q6UXB2 119 aa25.45■■□□□ 1.66
VPS37C-202ENST00000535818 POLR3EQ9NVU0 708 aa25.45■■□□□ 1.66
VPS37C-202ENST00000535818 RTEL1Q9NZ71 1219 aa25.45■■□□□ 1.66
VPS37C-202ENST00000535818 DDX41Q9UJV9 622 aaKnown RBP25.45■■□□□ 1.66
VPS37C-202ENST00000535818 ZMYND8Q9ULU4 1186 aaPredicted RBP25.45■■□□□ 1.66
VPS37C-202ENST00000535818 A0A0U1RQG5 324 aaPredicted RBP25.44■■□□□ 1.66
VPS37C-202ENST00000535818 ESYT2A0FGR8 921 aa25.44■■□□□ 1.66
VPS37C-202ENST00000535818 FOSP01100 380 aaPredicted RBP25.44■■□□□ 1.66
VPS37C-202ENST00000535818 MYL3P08590 195 aa25.44■■□□□ 1.66
VPS37C-202ENST00000535818 C1orf53Q5VUE5 145 aa25.44■■□□□ 1.66
VPS37C-202ENST00000535818 PGBD1Q96JS3 809 aa25.44■■□□□ 1.66
VPS37C-202ENST00000535818 VPS54Q9P1Q0 977 aa25.44■■□□□ 1.66
VPS37C-202ENST00000535818 SYN1P17600 705 aa25.43■■□□□ 1.66
VPS37C-202ENST00000535818 GNA11P29992 359 aa25.43■■□□□ 1.66
VPS37C-202ENST00000535818 RBM25P49756 843 aaKnown RBP25.43■■□□□ 1.66
VPS37C-202ENST00000535818 ARHGAP1Q07960 439 aa25.43■■□□□ 1.66
VPS37C-202ENST00000535818 AP3B2Q13367 1082 aa25.43■■□□□ 1.66
VPS37C-202ENST00000535818 NLRX1Q86UT6 975 aa25.43■■□□□ 1.66
VPS37C-202ENST00000535818 DHX37Q8IY37 1157 aaKnown RBP25.43■■□□□ 1.66
VPS37C-202ENST00000535818 INPP4AQ96PE3 977 aaPredicted RBP25.43■■□□□ 1.66
VPS37C-202ENST00000535818 ANO3Q9BYT9 981 aa25.43■■□□□ 1.66
VPS37C-202ENST00000535818 ZMYND12Q9H0C1 365 aa25.43■■□□□ 1.66
VPS37C-202ENST00000535818 PRKAG2Q9UGJ0 569 aa25.43■■□□□ 1.66
VPS37C-202ENST00000535818 TGFB3P10600 412 aa25.42■■□□□ 1.66
VPS37C-202ENST00000535818 TMEM260Q9NX78 707 aa25.42■■□□□ 1.66
VPS37C-202ENST00000535818 A6NJR5 290 aa25.41■■□□□ 1.66
VPS37C-202ENST00000535818 FIBPO43427 364 aa25.41■■□□□ 1.66
VPS37C-202ENST00000535818 SORBS3O60504 671 aa25.41■■□□□ 1.66
VPS37C-202ENST00000535818 PQBP1O60828 265 aaKnown RBP25.41■■□□□ 1.66
VPS37C-202ENST00000535818 LARGE1O95461 756 aa25.41■■□□□ 1.66
VPS37C-202ENST00000535818 GGPS1O95749 300 aa25.41■■□□□ 1.66
VPS37C-202ENST00000535818 UBA1P22314 1058 aaKnown RBP25.41■■□□□ 1.66
VPS37C-202ENST00000535818 NLRP5P59047 1200 aa25.41■■□□□ 1.66
VPS37C-202ENST00000535818 TLE2Q04725 743 aa25.41■■□□□ 1.66
VPS37C-202ENST00000535818 LAMC2Q13753 1193 aa25.41■■□□□ 1.66
VPS37C-202ENST00000535818 ME3Q16798 604 aa25.41■■□□□ 1.66
VPS37C-202ENST00000535818 JAKMIP3Q5VZ66 844 aa25.41■■□□□ 1.66
VPS37C-202ENST00000535818 REXO1Q8N1G1 1221 aaKnown RBP25.41■■□□□ 1.66
VPS37C-202ENST00000535818 NECAB1Q8N987 351 aa25.41■■□□□ 1.66
VPS37C-202ENST00000535818 BICD2Q8TD16 824 aa25.41■■□□□ 1.66
VPS37C-202ENST00000535818 AFG1LQ8WV93 481 aa25.41■■□□□ 1.66
VPS37C-202ENST00000535818 PRDM5Q9NQX1 630 aaPredicted RBP25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms