RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 ADCY6O43306 1168 aa13.8□□□□□ -0.2
CHD4-203ENST00000535717 RGS20O76081 388 aa13.8□□□□□ -0.2
CHD4-203ENST00000535717 AKR1A1P14550 325 aa13.8□□□□□ -0.2
CHD4-203ENST00000535717 ADCYAP1R1P41586 468 aa13.8□□□□□ -0.2
CHD4-203ENST00000535717 TMEM63BQ5T3F8 832 aa13.8□□□□□ -0.2
CHD4-203ENST00000535717 PCNX4Q63HM2 1172 aa13.8□□□□□ -0.2
CHD4-203ENST00000535717 MCTP2Q6DN12 878 aa13.8□□□□□ -0.2
CHD4-203ENST00000535717 U2AF1L4Q8WU68 220 aaKnown RBP13.8□□□□□ -0.2
CHD4-203ENST00000535717 LENG1Q96BZ8 264 aaPredicted RBP13.8□□□□□ -0.2
CHD4-203ENST00000535717 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.79□□□□□ -0.2
CHD4-203ENST00000535717 MSCO60682 206 aa13.79□□□□□ -0.2
CHD4-203ENST00000535717 SGPL1O95470 568 aa13.79□□□□□ -0.2
CHD4-203ENST00000535717 SREBF1P36956 1147 aa13.79□□□□□ -0.2
CHD4-203ENST00000535717 GJA8P48165 433 aa13.79□□□□□ -0.2
CHD4-203ENST00000535717 SOX10P56693 466 aa13.79□□□□□ -0.2
CHD4-203ENST00000535717 TNFAIP2Q03169 654 aa13.79□□□□□ -0.2
CHD4-203ENST00000535717 TRIM29Q14134 588 aa13.79□□□□□ -0.2
CHD4-203ENST00000535717 KRT40Q6A162 431 aa13.79□□□□□ -0.2
CHD4-203ENST00000535717 IQSEC1Q6DN90 963 aa13.79□□□□□ -0.2
CHD4-203ENST00000535717 XRRA1Q6P2D8 792 aa13.79□□□□□ -0.2
CHD4-203ENST00000535717 SEPT14Q6ZU15 432 aa13.79□□□□□ -0.2
CHD4-203ENST00000535717 FAM184AQ8NB25 1140 aa13.79□□□□□ -0.2
CHD4-203ENST00000535717 OXER1Q8TDS5 423 aa13.79□□□□□ -0.2
CHD4-203ENST00000535717 C8orf76Q96K31 380 aa13.79□□□□□ -0.2
CHD4-203ENST00000535717 CRISPLD2Q9H0B8 497 aa13.79□□□□□ -0.2
CHD4-203ENST00000535717 EHMT1Q9H9B1 1298 aa13.79□□□□□ -0.2
CHD4-203ENST00000535717 RTEL1Q9NZ71 1219 aa13.79□□□□□ -0.2
CHD4-203ENST00000535717 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.79□□□□□ -0.2
CHD4-203ENST00000535717 MMP1P03956 469 aa13.78□□□□□ -0.2
CHD4-203ENST00000535717 RARBP10826 455 aa13.78□□□□□ -0.2
CHD4-203ENST00000535717 SMPD1P17405 629 aa13.78□□□□□ -0.2
CHD4-203ENST00000535717 EN2P19622 333 aaPredicted RBP13.78□□□□□ -0.2
CHD4-203ENST00000535717 PTGS1P23219 599 aa13.78□□□□□ -0.2
CHD4-203ENST00000535717 GJB2P29033 226 aa13.78□□□□□ -0.2
CHD4-203ENST00000535717 GUCY1B3Q02153 619 aa13.78□□□□□ -0.2
CHD4-203ENST00000535717 GJC2Q5T442 439 aaPredicted RBP13.78□□□□□ -0.2
CHD4-203ENST00000535717 CCDC62Q6P9F0 684 aa13.78□□□□□ -0.2
CHD4-203ENST00000535717 HSCBQ8IWL3 235 aa13.78□□□□□ -0.2
CHD4-203ENST00000535717 SCFD2Q8WU76 684 aa13.78□□□□□ -0.2
CHD4-203ENST00000535717 CRYGNQ8WXF5 182 aa13.78□□□□□ -0.2
CHD4-203ENST00000535717 INPP4AQ96PE3 977 aaPredicted RBP13.78□□□□□ -0.2
CHD4-203ENST00000535717 WDR11Q9BZH6 1224 aa13.78□□□□□ -0.2
CHD4-203ENST00000535717 OGDHLQ9ULD0 1010 aa13.78□□□□□ -0.2
CHD4-203ENST00000535717 SMC3Q9UQE7 1217 aa13.78□□□□□ -0.2
CHD4-203ENST00000535717 KIAA1217Q5T5P2 1943 aa13.78□□□□□ -0.2
CHD4-203ENST00000535717 DUSP11O75319 330 aaKnown RBP13.77□□□□□ -0.21
CHD4-203ENST00000535717 STAM2O75886 525 aa13.77□□□□□ -0.21
CHD4-203ENST00000535717 ARIH2O95376 493 aa13.77□□□□□ -0.21
CHD4-203ENST00000535717 TFRCP02786 760 aaKnown RBP13.77□□□□□ -0.21
CHD4-203ENST00000535717 TXNP10599 105 aaKnown RBP13.77□□□□□ -0.21
CHD4-203ENST00000535717 ITGB5P18084 799 aa13.77□□□□□ -0.21
CHD4-203ENST00000535717 KRT2P35908 639 aa13.77□□□□□ -0.21
CHD4-203ENST00000535717 ARHGAP4P98171 946 aa13.77□□□□□ -0.21
CHD4-203ENST00000535717 NR5A1Q13285 461 aa13.77□□□□□ -0.21
CHD4-203ENST00000535717 DUSP28Q4G0W2 176 aa13.77□□□□□ -0.21
CHD4-203ENST00000535717 FRMPD3Q5JV73 1810 aa13.77□□□□□ -0.21
CHD4-203ENST00000535717 FBXO18Q8NFZ0 1043 aa13.77□□□□□ -0.21
CHD4-203ENST00000535717 XPNPEP3Q9NQH7 507 aa13.77□□□□□ -0.21
CHD4-203ENST00000535717 GNEQ9Y223 722 aaKnown RBP13.77□□□□□ -0.21
CHD4-203ENST00000535717 UBIAD1Q9Y5Z9 338 aa13.77□□□□□ -0.21
CHD4-203ENST00000535717 BTBD18B2RXH4 712 aa13.76□□□□□ -0.21
CHD4-203ENST00000535717 SPATA31C2B4DYI2 1134 aa13.76□□□□□ -0.21
CHD4-203ENST00000535717 EDIL3O43854 480 aa13.76□□□□□ -0.21
CHD4-203ENST00000535717 PGK1P00558 417 aa13.76□□□□□ -0.21
CHD4-203ENST00000535717 CYP3A4P08684 503 aa13.76□□□□□ -0.21
CHD4-203ENST00000535717 SEMA3FQ13275 785 aa13.76□□□□□ -0.21
CHD4-203ENST00000535717 TTLL4Q14679 1199 aa13.76□□□□□ -0.21
CHD4-203ENST00000535717 LY6KQ17RY6 165 aa13.76□□□□□ -0.21
CHD4-203ENST00000535717 KRT25Q7Z3Z0 450 aa13.76□□□□□ -0.21
CHD4-203ENST00000535717 DIS3L2Q8IYB7 885 aaKnown RBP13.76□□□□□ -0.21
CHD4-203ENST00000535717 CYP2W1Q8TAV3 490 aa13.76□□□□□ -0.21
CHD4-203ENST00000535717 TBCKQ8TEA7 893 aa13.76□□□□□ -0.21
CHD4-203ENST00000535717 COPS5Q92905 334 aa13.76□□□□□ -0.21
CHD4-203ENST00000535717 TNFRSF25Q93038 417 aa13.76□□□□□ -0.21
CHD4-203ENST00000535717 INTS4Q96HW7 963 aaKnown RBP13.76□□□□□ -0.21
CHD4-203ENST00000535717 BRMS1Q9HCU9 246 aa13.76□□□□□ -0.21
CHD4-203ENST00000535717 FOXD4L1Q9NU39 408 aa13.76□□□□□ -0.21
CHD4-203ENST00000535717 DDX41Q9UJV9 622 aaKnown RBP13.76□□□□□ -0.21
CHD4-203ENST00000535717 KIF3AQ9Y496 699 aa13.76□□□□□ -0.21
CHD4-203ENST00000535717 MRVI1Q9Y6F6 885 aa13.76□□□□□ -0.21
CHD4-203ENST00000535717 MYH7BA7E2Y1 1941 aa13.76□□□□□ -0.21
CHD4-203ENST00000535717 SYNRGQ9UMZ2 1314 aa13.75□□□□□ -0.21
CHD4-203ENST00000535717 CCDC194A0A1B0GVG4 234 aa13.75□□□□□ -0.21
CHD4-203ENST00000535717 FAM205CA6NFA0 338 aa13.75□□□□□ -0.21
CHD4-203ENST00000535717 FAM86B1E9PN63 330 aa13.75□□□□□ -0.21
CHD4-203ENST00000535717 ADAMTS4O75173 837 aa13.75□□□□□ -0.21
CHD4-203ENST00000535717 FAM86B2P0C5J1 330 aa13.75□□□□□ -0.21
CHD4-203ENST00000535717 ICAM3P32942 547 aa13.75□□□□□ -0.21
CHD4-203ENST00000535717 MNX1P50219 401 aaPredicted RBP13.75□□□□□ -0.21
CHD4-203ENST00000535717 IRX5P78411 483 aaPredicted RBP13.75□□□□□ -0.21
CHD4-203ENST00000535717 SP2Q02086 613 aa13.75□□□□□ -0.21
CHD4-203ENST00000535717 NONOQ15233 471 aaKnown RBP eCLIP13.75□□□□□ -0.21
CHD4-203ENST00000535717 GNPTABQ3T906 1256 aa13.75□□□□□ -0.21
CHD4-203ENST00000535717 CEP55Q53EZ4 464 aa13.75□□□□□ -0.21
CHD4-203ENST00000535717 EARS2Q5JPH6 523 aaKnown RBP13.75□□□□□ -0.21
CHD4-203ENST00000535717 KCNV1Q6PIU1 500 aa13.75□□□□□ -0.21
CHD4-203ENST00000535717 GPRASP2Q96D09 838 aa13.75□□□□□ -0.21
CHD4-203ENST00000535717 MXRA8Q9BRK3 442 aa13.75□□□□□ -0.21
CHD4-203ENST00000535717 UPF3AQ9H1J1 476 aaKnown RBP13.75□□□□□ -0.21
CHD4-203ENST00000535717 JADE2Q9NQC1 790 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms