RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 DHX37Q8IY37 1157 aaKnown RBP13.71□□□□□ -0.21
KNTC1-208ENST00000535410 FANCBQ8NB91 859 aa13.71□□□□□ -0.21
KNTC1-208ENST00000535410 SMARCC2Q8TAQ2 1214 aa13.71□□□□□ -0.21
KNTC1-208ENST00000535410 EMID1Q96A84 441 aaPredicted RBP13.71□□□□□ -0.21
KNTC1-208ENST00000535410 KATNAL1Q9BW62 490 aa13.71□□□□□ -0.21
KNTC1-208ENST00000535410 RBM28Q9NW13 759 aaKnown RBP13.71□□□□□ -0.21
KNTC1-208ENST00000535410 COL20A1Q9P218 1284 aa13.71□□□□□ -0.21
KNTC1-208ENST00000535410 DDX41Q9UJV9 622 aaKnown RBP13.71□□□□□ -0.21
KNTC1-208ENST00000535410 NOD1Q9Y239 953 aa13.71□□□□□ -0.21
KNTC1-208ENST00000535410 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.7□□□□□ -0.22
KNTC1-208ENST00000535410 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.7□□□□□ -0.22
KNTC1-208ENST00000535410 OPLAHO14841 1288 aa13.7□□□□□ -0.22
KNTC1-208ENST00000535410 HOXA13P31271 388 aaPredicted RBP13.7□□□□□ -0.22
KNTC1-208ENST00000535410 PSMC6P62333 389 aa13.7□□□□□ -0.22
KNTC1-208ENST00000535410 PGM5Q15124 567 aa13.7□□□□□ -0.22
KNTC1-208ENST00000535410 LY6KQ17RY6 165 aa13.7□□□□□ -0.22
KNTC1-208ENST00000535410 C9orf50Q5SZB4 431 aa13.7□□□□□ -0.22
KNTC1-208ENST00000535410 TMEM63BQ5T3F8 832 aa13.7□□□□□ -0.22
KNTC1-208ENST00000535410 ZNF697Q5TEC3 545 aa13.7□□□□□ -0.22
KNTC1-208ENST00000535410 FCHSD1Q86WN1 690 aa13.7□□□□□ -0.22
KNTC1-208ENST00000535410 RETREG2Q8NC44 543 aa13.7□□□□□ -0.22
KNTC1-208ENST00000535410 AFG1LQ8WV93 481 aa13.7□□□□□ -0.22
KNTC1-208ENST00000535410 MYL10Q9BUA6 226 aa13.7□□□□□ -0.22
KNTC1-208ENST00000535410 GRIN2DO15399 1336 aa13.69□□□□□ -0.22
KNTC1-208ENST00000535410 PPFIA4O75335 1185 aa13.69□□□□□ -0.22
KNTC1-208ENST00000535410 ARIH2O95376 493 aa13.69□□□□□ -0.22
KNTC1-208ENST00000535410 PFKMP08237 780 aa13.69□□□□□ -0.22
KNTC1-208ENST00000535410 CSF2RAP15509 400 aa13.69□□□□□ -0.22
KNTC1-208ENST00000535410 NBPF20Q3BBV1 942 aa13.69□□□□□ -0.22
KNTC1-208ENST00000535410 CCDC155Q8N6L0 562 aa13.69□□□□□ -0.22
KNTC1-208ENST00000535410 PPTC7Q8NI37 304 aa13.69□□□□□ -0.22
KNTC1-208ENST00000535410 PIBF1Q8WXW3 757 aa13.69□□□□□ -0.22
KNTC1-208ENST00000535410 COPS5Q92905 334 aa13.69□□□□□ -0.22
KNTC1-208ENST00000535410 PPP1R12CQ9BZL4 782 aa13.69□□□□□ -0.22
KNTC1-208ENST00000535410 TRPV6Q9H1D0 765 aa13.69□□□□□ -0.22
KNTC1-208ENST00000535410 PSTPIP2Q9H939 334 aa13.69□□□□□ -0.22
KNTC1-208ENST00000535410 EHMT1Q9H9B1 1298 aa13.69□□□□□ -0.22
KNTC1-208ENST00000535410 IL23AQ9NPF7 189 aa13.69□□□□□ -0.22
KNTC1-208ENST00000535410 TMEM265A0A087WTH1 108 aa13.68□□□□□ -0.22
KNTC1-208ENST00000535410 CCDC196A0A1B0GTZ2 297 aa13.68□□□□□ -0.22
KNTC1-208ENST00000535410 PIK3CDO00329 1044 aa13.68□□□□□ -0.22
KNTC1-208ENST00000535410 ZBTB43O43298 467 aa13.68□□□□□ -0.22
KNTC1-208ENST00000535410 B4GALT4O60513 344 aa13.68□□□□□ -0.22
KNTC1-208ENST00000535410 FGBP02675 491 aa13.68□□□□□ -0.22
KNTC1-208ENST00000535410 MMP3P08254 477 aa13.68□□□□□ -0.22
KNTC1-208ENST00000535410 PTGS1P23219 599 aa13.68□□□□□ -0.22
KNTC1-208ENST00000535410 CYP2C18P33260 490 aa13.68□□□□□ -0.22
KNTC1-208ENST00000535410 RFC2P35250 354 aa13.68□□□□□ -0.22
KNTC1-208ENST00000535410 RCAN1P53805 252 aa13.68□□□□□ -0.22
KNTC1-208ENST00000535410 ARHGAP1Q07960 439 aa13.68□□□□□ -0.22
KNTC1-208ENST00000535410 BFSP2Q13515 415 aa13.68□□□□□ -0.22
KNTC1-208ENST00000535410 NEDD9Q14511 834 aa13.68□□□□□ -0.22
KNTC1-208ENST00000535410 SLC35G1Q2M3R5 365 aa13.68□□□□□ -0.22
KNTC1-208ENST00000535410 ERICH6BQ5W0A0 696 aa13.68□□□□□ -0.22
KNTC1-208ENST00000535410 SRBD1Q8N5C6 995 aaKnown RBP13.68□□□□□ -0.22
KNTC1-208ENST00000535410 NOC4LQ9BVI4 516 aaKnown RBP13.68□□□□□ -0.22
KNTC1-208ENST00000535410 MLXIPQ9HAP2 919 aa13.68□□□□□ -0.22
KNTC1-208ENST00000535410 MTMR10Q9NXD2 777 aa13.68□□□□□ -0.22
KNTC1-208ENST00000535410 STXBP5LQ9Y2K9 1186 aa13.68□□□□□ -0.22
KNTC1-208ENST00000535410 PITPNM1O00562 1244 aa13.67□□□□□ -0.22
KNTC1-208ENST00000535410 EPB41L2O43491 1005 aaKnown RBP13.67□□□□□ -0.22
KNTC1-208ENST00000535410 PSMA5P28066 241 aa13.67□□□□□ -0.22
KNTC1-208ENST00000535410 CHMP4BP1P59074 171 aa13.67□□□□□ -0.22
KNTC1-208ENST00000535410 EXOSC10Q01780 885 aaKnown RBP13.67□□□□□ -0.22
KNTC1-208ENST00000535410 CELF3Q5SZQ8 465 aaKnown RBP13.67□□□□□ -0.22
KNTC1-208ENST00000535410 TMTC3Q6ZXV5 915 aa13.67□□□□□ -0.22
KNTC1-208ENST00000535410 NLRX1Q86UT6 975 aa13.67□□□□□ -0.22
KNTC1-208ENST00000535410 SESTD1Q86VW0 696 aa13.67□□□□□ -0.22
KNTC1-208ENST00000535410 MICU3Q86XE3 530 aa13.67□□□□□ -0.22
KNTC1-208ENST00000535410 C7orf31Q8N865 590 aa13.67□□□□□ -0.22
KNTC1-208ENST00000535410 GIMAP8Q8ND71 665 aaPredicted RBP13.67□□□□□ -0.22
KNTC1-208ENST00000535410 CDHR1Q96JP9 859 aa13.67□□□□□ -0.22
KNTC1-208ENST00000535410 SPATA33Q96N06 139 aa13.67□□□□□ -0.22
KNTC1-208ENST00000535410 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.67□□□□□ -0.22
KNTC1-208ENST00000535410 GLT8D2Q9H1C3 349 aa13.67□□□□□ -0.22
KNTC1-208ENST00000535410 SPDYE3A6NKU9 549 aa13.66□□□□□ -0.22
KNTC1-208ENST00000535410 hCG_1984214I3L0E3 225 aa13.66□□□□□ -0.22
KNTC1-208ENST00000535410 PARNO95453 639 aaKnown RBP13.66□□□□□ -0.22
KNTC1-208ENST00000535410 ACTN1P12814 892 aa13.66□□□□□ -0.22
KNTC1-208ENST00000535410 ICAM3P32942 547 aa13.66□□□□□ -0.22
KNTC1-208ENST00000535410 EPHB4P54760 987 aa13.66□□□□□ -0.22
KNTC1-208ENST00000535410 RTN1Q16799 776 aa13.66□□□□□ -0.22
KNTC1-208ENST00000535410 TMEM240Q5SV17 173 aa13.66□□□□□ -0.22
KNTC1-208ENST00000535410 MYSM1Q5VVJ2 828 aa13.66□□□□□ -0.22
KNTC1-208ENST00000535410 APOA5Q6Q788 366 aa13.66□□□□□ -0.22
KNTC1-208ENST00000535410 ZNF365Q70YC5 407 aa13.66□□□□□ -0.22
KNTC1-208ENST00000535410 ZNF713Q8N859 430 aaPredicted RBP13.66□□□□□ -0.22
KNTC1-208ENST00000535410 HERVK_113Q902F9 699 aa13.66□□□□□ -0.22
KNTC1-208ENST00000535410 LRRC2Q9BYS8 371 aa13.66□□□□□ -0.22
KNTC1-208ENST00000535410 TRMT13Q9NUP7 481 aaKnown RBP13.66□□□□□ -0.22
KNTC1-208ENST00000535410 LRRC37A2A6NM11 1700 aa13.65□□□□□ -0.22
KNTC1-208ENST00000535410 LTBP2Q14767 1821 aa13.65□□□□□ -0.22
KNTC1-208ENST00000535410 LCTP09848 1927 aa13.65□□□□□ -0.22
KNTC1-208ENST00000535410 SPATA31C2B4DYI2 1134 aa13.65□□□□□ -0.22
KNTC1-208ENST00000535410 NOP56O00567 594 aaKnown RBP13.65□□□□□ -0.22
KNTC1-208ENST00000535410 FIBPO43427 364 aa13.65□□□□□ -0.22
KNTC1-208ENST00000535410 PLEKHA8P1O95397 391 aa13.65□□□□□ -0.22
KNTC1-208ENST00000535410 GGPS1O95749 300 aa13.65□□□□□ -0.22
KNTC1-208ENST00000535410 RXRAP19793 462 aa13.65□□□□□ -0.22
KNTC1-208ENST00000535410 CCL23P55773 120 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms