RNA–Protein interactions for RNA: ENST00000535327.5

CCDC7-207, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-207ENST00000535327 SMARCA5O60264 1052 aaPredicted RBP8.68□□□□□ -1.02
CCDC7-207ENST00000535327 ITGAVP06756 1048 aa8.68□□□□□ -1.02
CCDC7-207ENST00000535327 ATF4P18848 351 aaPredicted RBP8.68□□□□□ -1.02
CCDC7-207ENST00000535327 BCL6P41182 706 aa8.68□□□□□ -1.02
CCDC7-207ENST00000535327 ECI1P42126 302 aa8.68□□□□□ -1.02
CCDC7-207ENST00000535327 NCAPHQ15003 741 aa8.68□□□□□ -1.02
CCDC7-207ENST00000535327 CEP68Q76N32 757 aa8.68□□□□□ -1.02
CCDC7-207ENST00000535327 MILR1Q7Z6M3 343 aa8.68□□□□□ -1.02
CCDC7-207ENST00000535327 MIB1Q86YT6 1006 aa8.68□□□□□ -1.02
CCDC7-207ENST00000535327 CRACR2BQ8N4Y2 399 aaPredicted RBP8.68□□□□□ -1.02
CCDC7-207ENST00000535327 RBM15Q96T37 977 aaKnown RBP eCLIP8.68□□□□□ -1.02
CCDC7-207ENST00000535327 AP5M1Q9H0R1 490 aa8.68□□□□□ -1.02
CCDC7-207ENST00000535327 ZNF143P52747 638 aaPredicted RBP8.67□□□□□ -1.02
CCDC7-207ENST00000535327 ITGA1P56199 1179 aa8.67□□□□□ -1.02
CCDC7-207ENST00000535327 ZXDCQ2QGD7 858 aaPredicted RBP8.67□□□□□ -1.02
CCDC7-207ENST00000535327 RGL3Q3MIN7 710 aa8.67□□□□□ -1.02
CCDC7-207ENST00000535327 LARP1BQ659C4 914 aaKnown RBP8.67□□□□□ -1.02
CCDC7-207ENST00000535327 MICAL1Q8TDZ2 1067 aa8.67□□□□□ -1.02
CCDC7-207ENST00000535327 CCSER2Q9H7U1 834 aa8.67□□□□□ -1.02
CCDC7-207ENST00000535327 ITGB3P05106 788 aa8.66□□□□□ -1.02
CCDC7-207ENST00000535327 LCP1P13796 627 aa8.66□□□□□ -1.02
CCDC7-207ENST00000535327 RPL13P26373 211 aaKnown RBP8.66□□□□□ -1.02
CCDC7-207ENST00000535327 PUM1Q14671 1186 aaKnown RBP eCLIP8.66□□□□□ -1.02
CCDC7-207ENST00000535327 SV2CQ496J9 727 aa8.66□□□□□ -1.02
CCDC7-207ENST00000535327 MCTP2Q6DN12 878 aa8.66□□□□□ -1.02
CCDC7-207ENST00000535327 ZNF227Q86WZ6 799 aa8.66□□□□□ -1.02
CCDC7-207ENST00000535327 KYQ8NBH2 561 aa8.66□□□□□ -1.02
CCDC7-207ENST00000535327 KREMEN2Q8NCW0 462 aa8.66□□□□□ -1.02
CCDC7-207ENST00000535327 SEC14L1Q92503 715 aa8.66□□□□□ -1.02
CCDC7-207ENST00000535327 STRIP2Q9ULQ0 834 aa8.66□□□□□ -1.02
CCDC7-207ENST00000535327 TIMM13Q9Y5L4 95 aaPredicted RBP8.66□□□□□ -1.02
CCDC7-207ENST00000535327 SNRPB2P08579 225 aaKnown RBP8.65□□□□□ -1.02
CCDC7-207ENST00000535327 RPL11P62913 178 aaKnown RBP8.65□□□□□ -1.02
CCDC7-207ENST00000535327 CR1LQ2VPA4 569 aa8.65□□□□□ -1.02
CCDC7-207ENST00000535327 MRM1Q6IN84 353 aaKnown RBP8.65□□□□□ -1.02
CCDC7-207ENST00000535327 DENND5AQ6IQ26 1287 aa8.65□□□□□ -1.02
CCDC7-207ENST00000535327 FAM178BQ8IXR5 827 aa8.65□□□□□ -1.02
CCDC7-207ENST00000535327 RCBTB1Q8NDN9 531 aa8.65□□□□□ -1.02
CCDC7-207ENST00000535327 DIO2Q92813 273 aa8.65□□□□□ -1.02
CCDC7-207ENST00000535327 X6R8D5 127 aa8.65□□□□□ -1.02
CCDC7-207ENST00000535327 DDX3XO00571 662 aaKnown RBP eCLIP8.64□□□□□ -1.03
CCDC7-207ENST00000535327 NAT2P11245 290 aa8.64□□□□□ -1.03
CCDC7-207ENST00000535327 MAGEA10P43363 369 aaPredicted RBP8.64□□□□□ -1.03
CCDC7-207ENST00000535327 ZNF827Q17R98 1081 aa8.64□□□□□ -1.03
CCDC7-207ENST00000535327 TBC1D10BQ4KMP7 808 aaPredicted RBP8.64□□□□□ -1.03
CCDC7-207ENST00000535327 PRR31Q5SQ13 230 aa8.64□□□□□ -1.03
CCDC7-207ENST00000535327 TRMT2BQ96GJ1 504 aaKnown RBP8.64□□□□□ -1.03
CCDC7-207ENST00000535327 SLC6A11P48066 632 aa8.63□□□□□ -1.03
CCDC7-207ENST00000535327 MROH9Q5TGP6 573 aa8.63□□□□□ -1.03
CCDC7-207ENST00000535327 RIOX2Q8IUF8 465 aa8.63□□□□□ -1.03
CCDC7-207ENST00000535327 FAM126BQ8IXS8 530 aa8.63□□□□□ -1.03
CCDC7-207ENST00000535327 Q8N1Y9 231 aa8.63□□□□□ -1.03
CCDC7-207ENST00000535327 GPR20Q99678 358 aa8.63□□□□□ -1.03
CCDC7-207ENST00000535327 ACTR10Q9NZ32 417 aa8.63□□□□□ -1.03
CCDC7-207ENST00000535327 LRP2BPQ9P2M1 347 aa8.63□□□□□ -1.03
CCDC7-207ENST00000535327 INVSQ9Y283 1065 aa8.63□□□□□ -1.03
CCDC7-207ENST00000535327 MEFVO15553 781 aaPredicted RBP8.62□□□□□ -1.03
CCDC7-207ENST00000535327 SUSD5O60279 629 aa8.62□□□□□ -1.03
CCDC7-207ENST00000535327 ETFBP38117 255 aa8.62□□□□□ -1.03
CCDC7-207ENST00000535327 ADAM17P78536 824 aa8.62□□□□□ -1.03
CCDC7-207ENST00000535327 ADAM9Q13443 819 aa8.62□□□□□ -1.03
CCDC7-207ENST00000535327 IQCEQ6IPM2 695 aa8.62□□□□□ -1.03
CCDC7-207ENST00000535327 TXNDC5Q8NBS9 432 aaKnown RBP8.62□□□□□ -1.03
CCDC7-207ENST00000535327 ARRDC4Q8NCT1 418 aa8.62□□□□□ -1.03
CCDC7-207ENST00000535327 TMEM169Q96HH4 297 aa8.62□□□□□ -1.03
CCDC7-207ENST00000535327 ZSWIM3Q96MP5 696 aa8.62□□□□□ -1.03
CCDC7-207ENST00000535327 KRTAP3-1Q9BYR8 98 aa8.62□□□□□ -1.03
CCDC7-207ENST00000535327 SMPD4Q9NXE4 827 aa8.62□□□□□ -1.03
CCDC7-207ENST00000535327 CNOT11Q9UKZ1 510 aaKnown RBP8.62□□□□□ -1.03
CCDC7-207ENST00000535327 HOXC12P31275 282 aa8.61□□□□□ -1.03
CCDC7-207ENST00000535327 KCNJ6P48051 423 aa8.61□□□□□ -1.03
CCDC7-207ENST00000535327 E4F1Q66K89 784 aaPredicted RBP8.61□□□□□ -1.03
CCDC7-207ENST00000535327 ZC3H18Q86VM9 953 aaKnown RBP8.61□□□□□ -1.03
CCDC7-207ENST00000535327 TMEM145Q8NBT3 493 aa8.61□□□□□ -1.03
CCDC7-207ENST00000535327 WASF3Q9UPY6 502 aa8.61□□□□□ -1.03
CCDC7-207ENST00000535327 PCDHA2Q9Y5H9 948 aa8.61□□□□□ -1.03
CCDC7-207ENST00000535327 MROH6A6NGR9 719 aa8.6□□□□□ -1.03
CCDC7-207ENST00000535327 DDAH1O94760 285 aa8.6□□□□□ -1.03
CCDC7-207ENST00000535327 SCG5P05408 212 aa8.6□□□□□ -1.03
CCDC7-207ENST00000535327 GRIA2P42262 883 aa8.6□□□□□ -1.03
CCDC7-207ENST00000535327 PPIL6Q8IXY8 311 aa8.6□□□□□ -1.03
CCDC7-207ENST00000535327 TTLL6Q8N841 843 aa8.6□□□□□ -1.03
CCDC7-207ENST00000535327 TMPRSS5Q9H3S3 457 aa8.6□□□□□ -1.03
CCDC7-207ENST00000535327 PLATP00750 562 aa8.59□□□□□ -1.03
CCDC7-207ENST00000535327 SSBP05455 408 aaKnown RBP eCLIP8.59□□□□□ -1.03
CCDC7-207ENST00000535327 GFRA1P56159 465 aa8.59□□□□□ -1.03
CCDC7-207ENST00000535327 LIMS2Q7Z4I7 341 aa8.59□□□□□ -1.03
CCDC7-207ENST00000535327 BORCS6Q96GS4 357 aa8.59□□□□□ -1.03
CCDC7-207ENST00000535327 C1orf159Q96HA4 380 aa8.59□□□□□ -1.03
CCDC7-207ENST00000535327 LOXL4Q96JB6 756 aa8.59□□□□□ -1.03
CCDC7-207ENST00000535327 CHAMP1Q96JM3 812 aa8.59□□□□□ -1.03
CCDC7-207ENST00000535327 C8orf49Q96NF6 230 aa8.59□□□□□ -1.03
CCDC7-207ENST00000535327 KCNAB2Q13303 367 aa8.58□□□□□ -1.04
CCDC7-207ENST00000535327 FAM26FQ5R3K3 315 aa8.58□□□□□ -1.04
CCDC7-207ENST00000535327 YIPF4Q9BSR8 244 aa8.58□□□□□ -1.04
CCDC7-207ENST00000535327 SSBP3Q9BWW4 388 aaPredicted RBP8.58□□□□□ -1.04
CCDC7-207ENST00000535327 CAPN10Q9HC96 672 aa8.58□□□□□ -1.04
CCDC7-207ENST00000535327 RBPJLQ9UBG7 517 aa8.58□□□□□ -1.04
CCDC7-207ENST00000535327 TCRBV5S2A0A599 114 aa8.57□□□□□ -1.04
CCDC7-207ENST00000535327 MYO1BO43795 1136 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms