RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 SCRN1Q12765 414 aa19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 ERFEQ4G0M1 354 aa19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 TUBGCP2Q9BSJ2 902 aa19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 PTPRTO14522 1441 aa19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 AFPP02771 609 aaKnown RBP19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 ZNF215Q9UL58 517 aaPredicted RBP19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 EPN1Q9Y6I3 576 aaPredicted RBP19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 hCG_1984214I3L0E3 225 aa19.75■□□□□ 0.75
SFSWAP-203ENST00000535236 ABCD1P33897 745 aa19.75■□□□□ 0.75
SFSWAP-203ENST00000535236 STAT2P52630 851 aa19.75■□□□□ 0.75
SFSWAP-203ENST00000535236 EHHADHQ08426 723 aa19.75■□□□□ 0.75
SFSWAP-203ENST00000535236 TBC1D10BQ4KMP7 808 aaPredicted RBP19.75■□□□□ 0.75
SFSWAP-203ENST00000535236 ZNF713Q8N859 430 aaPredicted RBP19.75■□□□□ 0.75
SFSWAP-203ENST00000535236 ATP6V1E2Q96A05 226 aa19.75■□□□□ 0.75
SFSWAP-203ENST00000535236 FAM81BQ96LP2 452 aa19.75■□□□□ 0.75
SFSWAP-203ENST00000535236 ZBTB1Q9Y2K1 713 aa19.75■□□□□ 0.75
SFSWAP-203ENST00000535236 MUM1Q2TAK8 710 aa19.75■□□□□ 0.75
SFSWAP-203ENST00000535236 CCNYQ8ND76 341 aa19.75■□□□□ 0.75
SFSWAP-203ENST00000535236 LRRC8CQ8TDW0 803 aa19.75■□□□□ 0.75
SFSWAP-203ENST00000535236 PTPN22Q9Y2R2 807 aa19.75■□□□□ 0.75
SFSWAP-203ENST00000535236 CSPG5O95196 566 aa19.75■□□□□ 0.75
SFSWAP-203ENST00000535236 MAPK4P31152 587 aa19.75■□□□□ 0.75
SFSWAP-203ENST00000535236 ZMYM1Q5SVZ6 1142 aa19.75■□□□□ 0.75
SFSWAP-203ENST00000535236 MYLK4Q86YV6 388 aaPredicted RBP19.75■□□□□ 0.75
SFSWAP-203ENST00000535236 ZNF653Q96CK0 615 aa19.75■□□□□ 0.75
SFSWAP-203ENST00000535236 TMEM206Q9H813 350 aa19.75■□□□□ 0.75
SFSWAP-203ENST00000535236 ACTN1P12814 892 aa19.75■□□□□ 0.75
SFSWAP-203ENST00000535236 TFAMQ00059 246 aaKnown RBP19.75■□□□□ 0.75
SFSWAP-203ENST00000535236 SERPINB13Q9UIV8 391 aa19.75■□□□□ 0.75
SFSWAP-203ENST00000535236 PALD1Q9ULE6 856 aa19.75■□□□□ 0.75
SFSWAP-203ENST00000535236 MYOM2P54296 1465 aa19.75■□□□□ 0.75
SFSWAP-203ENST00000535236 IQCB1Q15051 598 aa19.74■□□□□ 0.75
SFSWAP-203ENST00000535236 DHX36Q9H2U1 1008 aaKnown RBP19.74■□□□□ 0.75
SFSWAP-203ENST00000535236 SPDYE2BA6NHP3 402 aa19.74■□□□□ 0.75
SFSWAP-203ENST00000535236 BAG2O95816 211 aa19.74■□□□□ 0.75
SFSWAP-203ENST00000535236 SPDYE6P0CI01 402 aa19.74■□□□□ 0.75
SFSWAP-203ENST00000535236 SYDE2Q5VT97 1194 aa19.74■□□□□ 0.75
SFSWAP-203ENST00000535236 RASGRP4Q8TDF6 673 aa19.74■□□□□ 0.75
SFSWAP-203ENST00000535236 ANKRD13CQ8N6S4 541 aa19.74■□□□□ 0.75
SFSWAP-203ENST00000535236 FBXO18Q8NFZ0 1043 aa19.74■□□□□ 0.75
SFSWAP-203ENST00000535236 DDX27Q96GQ7 796 aaKnown RBP19.74■□□□□ 0.75
SFSWAP-203ENST00000535236 GSDMAQ96QA5 445 aa19.74■□□□□ 0.75
SFSWAP-203ENST00000535236 PIGSQ96S52 555 aa19.74■□□□□ 0.75
SFSWAP-203ENST00000535236 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.74■□□□□ 0.758e-7■■■□□ 16.8
SFSWAP-203ENST00000535236 GOLGA8SH3BPF8 625 aa19.74■□□□□ 0.75
SFSWAP-203ENST00000535236 MED7O43513 233 aa19.74■□□□□ 0.75
SFSWAP-203ENST00000535236 PGBD1Q96JS3 809 aa19.74■□□□□ 0.75
SFSWAP-203ENST00000535236 TTC1Q99614 292 aa19.74■□□□□ 0.75
SFSWAP-203ENST00000535236 POC1B-GALNT4F8VUJ3 575 aa19.73■□□□□ 0.75
SFSWAP-203ENST00000535236 CASP2P42575 452 aa19.73■□□□□ 0.75
SFSWAP-203ENST00000535236 GABPB1Q06547 395 aaPredicted RBP19.73■□□□□ 0.75
SFSWAP-203ENST00000535236 PPP1R2P3Q6NXS1 205 aa19.73■□□□□ 0.75
SFSWAP-203ENST00000535236 RAD17O75943 681 aa19.73■□□□□ 0.75
SFSWAP-203ENST00000535236 ARL4AP40617 200 aa19.73■□□□□ 0.75
SFSWAP-203ENST00000535236 IREB2P48200 963 aaKnown RBP19.73■□□□□ 0.75
SFSWAP-203ENST00000535236 DHTKD1Q96HY7 919 aaPredicted RBP19.73■□□□□ 0.75
SFSWAP-203ENST00000535236 LRGUKQ96M69 825 aa19.73■□□□□ 0.75
SFSWAP-203ENST00000535236 UBN1Q9NPG3 1134 aa19.73■□□□□ 0.75
SFSWAP-203ENST00000535236 CPSF2Q9P2I0 782 aaKnown RBP19.73■□□□□ 0.75
SFSWAP-203ENST00000535236 C7orf31Q8N865 590 aa19.73■□□□□ 0.75
SFSWAP-203ENST00000535236 TBCKQ8TEA7 893 aa19.73■□□□□ 0.75
SFSWAP-203ENST00000535236 PCIF1Q9H4Z3 704 aa19.73■□□□□ 0.75
SFSWAP-203ENST00000535236 ABCC12Q96J65 1359 aa19.73■□□□□ 0.75
SFSWAP-203ENST00000535236 SLC4A1P02730 911 aa19.73■□□□□ 0.75
SFSWAP-203ENST00000535236 ATP1A2P50993 1020 aa19.73■□□□□ 0.75
SFSWAP-203ENST00000535236 KSR1Q8IVT5 923 aa19.73■□□□□ 0.75
SFSWAP-203ENST00000535236 M0R2C6 588 aa19.73■□□□□ 0.75
SFSWAP-203ENST00000535236 MYO1EQ12965 1108 aa19.73■□□□□ 0.75
SFSWAP-203ENST00000535236 ZNF526Q8TF50 670 aaPredicted RBP19.73■□□□□ 0.75
SFSWAP-203ENST00000535236 LRRC4Q9HBW1 653 aa19.73■□□□□ 0.75
SFSWAP-203ENST00000535236 SEC31BQ9NQW1 1179 aa19.73■□□□□ 0.75
SFSWAP-203ENST00000535236 PPP6R2O75170 966 aa19.72■□□□□ 0.75
SFSWAP-203ENST00000535236 ANXA13P27216 316 aa19.72■□□□□ 0.75
SFSWAP-203ENST00000535236 LTKP29376 864 aa19.72■□□□□ 0.75
SFSWAP-203ENST00000535236 COG7P83436 770 aa19.72■□□□□ 0.75
SFSWAP-203ENST00000535236 CACNB1Q02641 598 aaPredicted RBP19.72■□□□□ 0.75
SFSWAP-203ENST00000535236 ZBTB33Q86T24 672 aa19.72■□□□□ 0.75
SFSWAP-203ENST00000535236 CFAP61Q8NHU2 1237 aa19.72■□□□□ 0.75
SFSWAP-203ENST00000535236 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.72■□□□□ 0.752e-7■■■■■ 62.8
SFSWAP-203ENST00000535236 YEATS2Q9ULM3 1422 aa19.72■□□□□ 0.75
SFSWAP-203ENST00000535236 GOLGA8QA0A0J9YX86 632 aa19.72■□□□□ 0.75
SFSWAP-203ENST00000535236 GOLGA8OA6NCC3 632 aa19.72■□□□□ 0.75
SFSWAP-203ENST00000535236 GOLGA8NF8WBI6 632 aa19.72■□□□□ 0.75
SFSWAP-203ENST00000535236 MTERF2Q49AM1 385 aa19.72■□□□□ 0.75
SFSWAP-203ENST00000535236 MAGOHBQ96A72 148 aaKnown RBP19.72■□□□□ 0.75
SFSWAP-203ENST00000535236 DBNLQ9UJU6 430 aaKnown RBP19.72■□□□□ 0.75
SFSWAP-203ENST00000535236 ADAMTS12P58397 1594 aa19.72■□□□□ 0.75
SFSWAP-203ENST00000535236 TTC4O95801 387 aa19.72■□□□□ 0.75
SFSWAP-203ENST00000535236 P2RX5Q93086 422 aa19.72■□□□□ 0.75
SFSWAP-203ENST00000535236 DACT3Q96B18 629 aaPredicted RBP19.72■□□□□ 0.75
SFSWAP-203ENST00000535236 EEF2KMTQ96G04 330 aa19.72■□□□□ 0.75
SFSWAP-203ENST00000535236 TACO1Q9BSH4 297 aaKnown RBP19.72■□□□□ 0.75
SFSWAP-203ENST00000535236 CLGNO14967 610 aa19.72■□□□□ 0.75
SFSWAP-203ENST00000535236 SART1O43290 800 aaKnown RBP19.72■□□□□ 0.75
SFSWAP-203ENST00000535236 CPP00450 1065 aa19.72■□□□□ 0.75
SFSWAP-203ENST00000535236 STX1BP61266 288 aa19.72■□□□□ 0.75
SFSWAP-203ENST00000535236 LRRC41Q15345 812 aa19.72■□□□□ 0.75
SFSWAP-203ENST00000535236 APOA5Q6Q788 366 aa19.72■□□□□ 0.75
SFSWAP-203ENST00000535236 EEPD1Q7L9B9 569 aa19.72■□□□□ 0.75
SFSWAP-203ENST00000535236 Q9H521 79 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms