RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 LAMC2Q13753 1193 aa21.91■■□□□ 1.1
LRRK1-210ENST00000534045 SLC35G1Q2M3R5 365 aa21.91■■□□□ 1.1
LRRK1-210ENST00000534045 Q7L0L9 218 aa21.91■■□□□ 1.1
LRRK1-210ENST00000534045 CCDC82Q8N4S0 544 aa21.91■■□□□ 1.1
LRRK1-210ENST00000534045 FANCBQ8NB91 859 aa21.91■■□□□ 1.1
LRRK1-210ENST00000534045 ALDH8A1Q9H2A2 487 aaPredicted RBP21.91■■□□□ 1.1
LRRK1-210ENST00000534045 DDX41Q9UJV9 622 aaKnown RBP21.91■■□□□ 1.1
LRRK1-210ENST00000534045 NOD1Q9Y239 953 aa21.91■■□□□ 1.1
LRRK1-210ENST00000534045 HMGB1P09429 215 aaKnown RBP21.9■■□□□ 1.1
LRRK1-210ENST00000534045 CSF2RAP15509 400 aa21.9■■□□□ 1.1
LRRK1-210ENST00000534045 EPHB4P54760 987 aa21.9■■□□□ 1.1
LRRK1-210ENST00000534045 PGM5Q15124 567 aa21.9■■□□□ 1.1
LRRK1-210ENST00000534045 NBPF20Q3BBV1 942 aa21.9■■□□□ 1.1
LRRK1-210ENST00000534045 ZNF697Q5TEC3 545 aa21.9■■□□□ 1.1
LRRK1-210ENST00000534045 DHX32Q7L7V1 743 aaKnown RBP21.9■■□□□ 1.1
LRRK1-210ENST00000534045 VSIG10LQ86VR7 867 aa21.9■■□□□ 1.1
LRRK1-210ENST00000534045 DGKDQ16760 1214 aa21.89■■□□□ 1.09
LRRK1-210ENST00000534045 GNPTABQ3T906 1256 aa21.89■■□□□ 1.09
LRRK1-210ENST00000534045 MICU3Q86XE3 530 aa21.89■■□□□ 1.09
LRRK1-210ENST00000534045 RAB11FIP4Q86YS3 637 aa21.89■■□□□ 1.09
LRRK1-210ENST00000534045 CMTR1Q8N1G2 835 aaKnown RBP21.89■■□□□ 1.09
LRRK1-210ENST00000534045 SRBD1Q8N5C6 995 aaKnown RBP21.89■■□□□ 1.09
LRRK1-210ENST00000534045 NAP1L2Q9ULW6 460 aaPredicted RBP21.89■■□□□ 1.09
LRRK1-210ENST00000534045 PLEKHA8P1O95397 391 aa21.88■■□□□ 1.09
LRRK1-210ENST00000534045 MMP3P08254 477 aa21.88■■□□□ 1.09
LRRK1-210ENST00000534045 CCL23P55773 120 aa21.88■■□□□ 1.09
LRRK1-210ENST00000534045 SMAD3P84022 425 aaKnown RBP21.88■■□□□ 1.09
LRRK1-210ENST00000534045 PTPN11Q06124 597 aaPredicted RBP21.88■■□□□ 1.09
LRRK1-210ENST00000534045 ARHGAP1Q07960 439 aa21.88■■□□□ 1.09
LRRK1-210ENST00000534045 FAM109BQ6ICB4 259 aaPredicted RBP21.88■■□□□ 1.09
LRRK1-210ENST00000534045 NFRKBQ6P4R8 1299 aa21.88■■□□□ 1.09
LRRK1-210ENST00000534045 PSRC1Q6PGN9 363 aaPredicted RBP21.88■■□□□ 1.09
LRRK1-210ENST00000534045 RPUSD2Q8IZ73 545 aaKnown RBP21.88■■□□□ 1.09
LRRK1-210ENST00000534045 MTIF3Q9H2K0 278 aaKnown RBP21.88■■□□□ 1.09
LRRK1-210ENST00000534045 MLXIPQ9HAP2 919 aa21.88■■□□□ 1.09
LRRK1-210ENST00000534045 TRMT13Q9NUP7 481 aaKnown RBP21.88■■□□□ 1.09
LRRK1-210ENST00000534045 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.87■■□□□ 1.09
LRRK1-210ENST00000534045 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.87■■□□□ 1.09
LRRK1-210ENST00000534045 ACRP10323 421 aa21.87■■□□□ 1.09
LRRK1-210ENST00000534045 TGFB3P10600 412 aa21.87■■□□□ 1.09
LRRK1-210ENST00000534045 TSGA10IPQ3SY00 556 aa21.87■■□□□ 1.09
LRRK1-210ENST00000534045 SGMS1Q86VZ5 419 aa21.87■■□□□ 1.09
LRRK1-210ENST00000534045 RETREG2Q8NC44 543 aa21.87■■□□□ 1.09
LRRK1-210ENST00000534045 FAM161BQ96MY7 647 aa21.87■■□□□ 1.09
LRRK1-210ENST00000534045 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.87■■□□□ 1.09
LRRK1-210ENST00000534045 PSTPIP2Q9H939 334 aa21.87■■□□□ 1.09
LRRK1-210ENST00000534045 IL23AQ9NPF7 189 aa21.87■■□□□ 1.09
LRRK1-210ENST00000534045 RBM28Q9NW13 759 aaKnown RBP21.87■■□□□ 1.09
LRRK1-210ENST00000534045 ZBTB43O43298 467 aa21.86■■□□□ 1.09
LRRK1-210ENST00000534045 STAM2O75886 525 aa21.86■■□□□ 1.09
LRRK1-210ENST00000534045 REC8O95072 547 aa21.86■■□□□ 1.09
LRRK1-210ENST00000534045 FGBP02675 491 aa21.86■■□□□ 1.09
LRRK1-210ENST00000534045 RASEFQ8IZ41 740 aa21.86■■□□□ 1.09
LRRK1-210ENST00000534045 ZFP91Q96JP5 570 aaPredicted RBP21.86■■□□□ 1.09
LRRK1-210ENST00000534045 TCEANC2Q96MN5 208 aa21.86■■□□□ 1.09
LRRK1-210ENST00000534045 SPATA33Q96N06 139 aa21.86■■□□□ 1.09
LRRK1-210ENST00000534045 NOC4LQ9BVI4 516 aaKnown RBP21.86■■□□□ 1.09
LRRK1-210ENST00000534045 MTMR10Q9NXD2 777 aa21.86■■□□□ 1.09
LRRK1-210ENST00000534045 SORBS3O60504 671 aa21.85■■□□□ 1.09
LRRK1-210ENST00000534045 CYP2C9P11712 490 aa21.85■■□□□ 1.09
LRRK1-210ENST00000534045 EXOSC10Q01780 885 aaKnown RBP21.85■■□□□ 1.09
LRRK1-210ENST00000534045 TMEM240Q5SV17 173 aa21.85■■□□□ 1.09
LRRK1-210ENST00000534045 USP17L6PQ6QN14 398 aa21.85■■□□□ 1.09
LRRK1-210ENST00000534045 ZNF365Q70YC5 407 aa21.85■■□□□ 1.09
LRRK1-210ENST00000534045 C7orf31Q8N865 590 aa21.85■■□□□ 1.09
LRRK1-210ENST00000534045 EMID1Q96A84 441 aaPredicted RBP21.85■■□□□ 1.09
LRRK1-210ENST00000534045 KATNAL1Q9BW62 490 aa21.85■■□□□ 1.09
LRRK1-210ENST00000534045 RTEL1Q9NZ71 1219 aa21.85■■□□□ 1.09
LRRK1-210ENST00000534045 hCG_1642624A0A1W2PR95 340 aa21.84■■□□□ 1.09
LRRK1-210ENST00000534045 GGPS1O95749 300 aa21.84■■□□□ 1.09
LRRK1-210ENST00000534045 COL9A3Q14050 684 aaPredicted RBP21.84■■□□□ 1.09
LRRK1-210ENST00000534045 RTN1Q16799 776 aa21.84■■□□□ 1.09
LRRK1-210ENST00000534045 ADCK5Q3MIX3 580 aa21.84■■□□□ 1.09
LRRK1-210ENST00000534045 CELF3Q5SZQ8 465 aaKnown RBP21.84■■□□□ 1.09
LRRK1-210ENST00000534045 APOA5Q6Q788 366 aa21.84■■□□□ 1.09
LRRK1-210ENST00000534045 TMTC3Q6ZXV5 915 aa21.84■■□□□ 1.09
LRRK1-210ENST00000534045 HEATR3Q7Z4Q2 680 aa21.84■■□□□ 1.09
LRRK1-210ENST00000534045 IL31RAQ8NI17 732 aa21.84■■□□□ 1.09
LRRK1-210ENST00000534045 PPTC7Q8NI37 304 aa21.84■■□□□ 1.09
LRRK1-210ENST00000534045 PPP1R13LQ8WUF5 828 aa21.84■■□□□ 1.09
LRRK1-210ENST00000534045 MYH7BA7E2Y1 1941 aa21.84■■□□□ 1.09
LRRK1-210ENST00000534045 UMODL1Q5DID0 1318 aa21.83■■□□□ 1.09
LRRK1-210ENST00000534045 PPFIA4O75335 1185 aa21.83■■□□□ 1.09
LRRK1-210ENST00000534045 BFSP2Q13515 415 aa21.83■■□□□ 1.09
LRRK1-210ENST00000534045 PTGISQ16647 500 aa21.83■■□□□ 1.09
LRRK1-210ENST00000534045 MYSM1Q5VVJ2 828 aa21.83■■□□□ 1.09
LRRK1-210ENST00000534045 C16orf59Q7L2K0 433 aa21.83■■□□□ 1.09
LRRK1-210ENST00000534045 ALG1Q9BT22 464 aa21.83■■□□□ 1.09
LRRK1-210ENST00000534045 KLF18A0A0U1RQI7 1052 aa21.82■■□□□ 1.08
LRRK1-210ENST00000534045 SPDYE3A6NKU9 549 aa21.82■■□□□ 1.08
LRRK1-210ENST00000534045 GOLGA8AA7E2F4 631 aa21.82■■□□□ 1.08
LRRK1-210ENST00000534045 GOLGA8BA8MQT2 603 aa21.82■■□□□ 1.08
LRRK1-210ENST00000534045 PIK3CDO00329 1044 aa21.82■■□□□ 1.08
LRRK1-210ENST00000534045 NOP56O00567 594 aaKnown RBP21.82■■□□□ 1.08
LRRK1-210ENST00000534045 RGS20O76081 388 aa21.82■■□□□ 1.08
LRRK1-210ENST00000534045 NEDD9Q14511 834 aa21.82■■□□□ 1.08
LRRK1-210ENST00000534045 XRRA1Q6P2D8 792 aa21.82■■□□□ 1.08
LRRK1-210ENST00000534045 BLOC1S2Q6QNY1 142 aa21.82■■□□□ 1.08
LRRK1-210ENST00000534045 NLRX1Q86UT6 975 aa21.82■■□□□ 1.08
LRRK1-210ENST00000534045 CCDC155Q8N6L0 562 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms