RNA–Protein interactions for RNA: ENST00000533915.5

CMTM1-218, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-218ENST00000533915 CYP3A4P08684 503 aa16.04■□□□□ 0.16
CMTM1-218ENST00000533915 SYT1P21579 422 aa16.04■□□□□ 0.16
CMTM1-218ENST00000533915 CNGA1P29973 690 aa16.04■□□□□ 0.16
CMTM1-218ENST00000533915 CACNB2Q08289 660 aaPredicted RBP16.04■□□□□ 0.16
CMTM1-218ENST00000533915 MAP3K21Q5TCX8 1036 aa16.04■□□□□ 0.16
CMTM1-218ENST00000533915 PIK3AP1Q6ZUJ8 805 aa16.04■□□□□ 0.16
CMTM1-218ENST00000533915 NOSTRINQ8IVI9 506 aa16.04■□□□□ 0.16
CMTM1-218ENST00000533915 TBCKQ8TEA7 893 aa16.04■□□□□ 0.16
CMTM1-218ENST00000533915 SCFD2Q8WU76 684 aa16.04■□□□□ 0.16
CMTM1-218ENST00000533915 ARMC5Q96C12 935 aa16.04■□□□□ 0.16
CMTM1-218ENST00000533915 FAM184BQ9ULE4 1060 aa16.04■□□□□ 0.16
CMTM1-218ENST00000533915 STX6O43752 255 aa16.03■□□□□ 0.16
CMTM1-218ENST00000533915 TGFB3P10600 412 aa16.03■□□□□ 0.16
CMTM1-218ENST00000533915 CYBAP13498 195 aa16.03■□□□□ 0.16
CMTM1-218ENST00000533915 AKR1A1P14550 325 aa16.03■□□□□ 0.16
CMTM1-218ENST00000533915 GCFC2P16383 781 aaKnown RBP16.03■□□□□ 0.16
CMTM1-218ENST00000533915 U2AF2P26368 475 aaKnown RBP eCLIP16.03■□□□□ 0.16
CMTM1-218ENST00000533915 SETQ01105 290 aaPredicted RBP16.03■□□□□ 0.16
CMTM1-218ENST00000533915 NR5A1Q13285 461 aa16.03■□□□□ 0.16
CMTM1-218ENST00000533915 TTLL4Q14679 1199 aa16.03■□□□□ 0.16
CMTM1-218ENST00000533915 CEP55Q53EZ4 464 aa16.03■□□□□ 0.16
CMTM1-218ENST00000533915 IQSEC1Q6DN90 963 aa16.03■□□□□ 0.16
CMTM1-218ENST00000533915 EEPD1Q7L9B9 569 aa16.03■□□□□ 0.16
CMTM1-218ENST00000533915 NEK8Q86SG6 692 aa16.03■□□□□ 0.16
CMTM1-218ENST00000533915 OXER1Q8TDS5 423 aa16.03■□□□□ 0.16
CMTM1-218ENST00000533915 GPRASP2Q96D09 838 aa16.03■□□□□ 0.16
CMTM1-218ENST00000533915 PGBD1Q96JS3 809 aa16.03■□□□□ 0.16
CMTM1-218ENST00000533915 TSHZ2Q9NRE2 1034 aa16.03■□□□□ 0.16
CMTM1-218ENST00000533915 RBM19Q9Y4C8 960 aaKnown RBP16.03■□□□□ 0.16
CMTM1-218ENST00000533915 MYH7BA7E2Y1 1941 aa16.02■□□□□ 0.16
CMTM1-218ENST00000533915 SEPT4O43236 478 aa16.02■□□□□ 0.16
CMTM1-218ENST00000533915 FIBPO43427 364 aa16.02■□□□□ 0.16
CMTM1-218ENST00000533915 CAPN2P17655 700 aa16.02■□□□□ 0.16
CMTM1-218ENST00000533915 TRAPPC10P48553 1259 aa16.02■□□□□ 0.16
CMTM1-218ENST00000533915 INF2Q27J81 1249 aa16.02■□□□□ 0.16
CMTM1-218ENST00000533915 MOXD1Q6UVY6 613 aa16.02■□□□□ 0.16
CMTM1-218ENST00000533915 SEPT14Q6ZU15 432 aa16.02■□□□□ 0.16
CMTM1-218ENST00000533915 NIPA1Q7RTP0 329 aa16.02■□□□□ 0.16
CMTM1-218ENST00000533915 BRAPQ7Z569 592 aa16.02■□□□□ 0.16
CMTM1-218ENST00000533915 FBXO16Q8IX29 292 aaPredicted RBP16.02■□□□□ 0.16
CMTM1-218ENST00000533915 GIMAP8Q8ND71 665 aaPredicted RBP16.02■□□□□ 0.16
CMTM1-218ENST00000533915 IL31RAQ8NI17 732 aa16.02■□□□□ 0.16
CMTM1-218ENST00000533915 ZNF333Q96JL9 665 aa16.02■□□□□ 0.16
CMTM1-218ENST00000533915 INPP4AQ96PE3 977 aaPredicted RBP16.02■□□□□ 0.16
CMTM1-218ENST00000533915 MRVI1Q9Y6F6 885 aa16.02■□□□□ 0.16
CMTM1-218ENST00000533915 KIAA1217Q5T5P2 1943 aa16.02■□□□□ 0.15
CMTM1-218ENST00000533915 NKRFO15226 690 aaKnown RBP eCLIP16.01■□□□□ 0.15
CMTM1-218ENST00000533915 ZNF865P0CJ78 1059 aaPredicted RBP16.01■□□□□ 0.15
CMTM1-218ENST00000533915 RARBP10826 455 aa16.01■□□□□ 0.15
CMTM1-218ENST00000533915 CIITAP33076 1130 aa16.01■□□□□ 0.15
CMTM1-218ENST00000533915 MRPS9P82933 396 aaKnown RBP16.01■□□□□ 0.15
CMTM1-218ENST00000533915 TNFAIP2Q03169 654 aa16.01■□□□□ 0.15
CMTM1-218ENST00000533915 MTMR1Q13613 665 aa16.01■□□□□ 0.15
CMTM1-218ENST00000533915 LETM2Q2VYF4 491 aa16.01■□□□□ 0.15
CMTM1-218ENST00000533915 CCDC144BQ3MJ40 725 aa16.01■□□□□ 0.15
CMTM1-218ENST00000533915 TNFRSF25Q93038 417 aa16.01■□□□□ 0.15
CMTM1-218ENST00000533915 MXRA8Q9BRK3 442 aa16.01■□□□□ 0.15
CMTM1-218ENST00000533915 TMEM106CQ9BVX2 250 aa16.01■□□□□ 0.15
CMTM1-218ENST00000533915 WDR11Q9BZH6 1224 aa16.01■□□□□ 0.15
CMTM1-218ENST00000533915 RNF208Q9H0X6 261 aa16.01■□□□□ 0.15
CMTM1-218ENST00000533915 ZSCAN16Q9H4T2 348 aaPredicted RBP16.01■□□□□ 0.15
CMTM1-218ENST00000533915 SPC25Q9HBM1 224 aa16.01■□□□□ 0.15
CMTM1-218ENST00000533915 JADE2Q9NQC1 790 aa16.01■□□□□ 0.15
CMTM1-218ENST00000533915 RTEL1Q9NZ71 1219 aa16.01■□□□□ 0.15
CMTM1-218ENST00000533915 HTTP42858 3142 aa16.01■□□□□ 0.15
CMTM1-218ENST00000533915 RBM47A0AV96 593 aaKnown RBP16■□□□□ 0.15
CMTM1-218ENST00000533915 TXNP10599 105 aaKnown RBP16■□□□□ 0.15
CMTM1-218ENST00000533915 CCL5P13501 91 aa16■□□□□ 0.15
CMTM1-218ENST00000533915 ICAM3P32942 547 aa16■□□□□ 0.15
CMTM1-218ENST00000533915 TRIM32Q13049 653 aa16■□□□□ 0.15
CMTM1-218ENST00000533915 ORC2Q13416 577 aaPredicted RBP16■□□□□ 0.15
CMTM1-218ENST00000533915 BRDTQ58F21 947 aaPredicted RBP16■□□□□ 0.15
CMTM1-218ENST00000533915 RILPL1Q5EBL4 403 aa16■□□□□ 0.15
CMTM1-218ENST00000533915 PRAMEF19Q5SWL8 479 aa16■□□□□ 0.15
CMTM1-218ENST00000533915 PPP4R3AQ6IN85 833 aa16■□□□□ 0.15
CMTM1-218ENST00000533915 CRYGNQ8WXF5 182 aa16■□□□□ 0.15
CMTM1-218ENST00000533915 KATNBL1Q9H079 304 aa16■□□□□ 0.15
CMTM1-218ENST00000533915 XRN2Q9H0D6 950 aaKnown RBP eCLIP16■□□□□ 0.15
CMTM1-218ENST00000533915 TCEAL9Q9UHQ7 104 aa16■□□□□ 0.15
CMTM1-218ENST00000533915 UBIAD1Q9Y5Z9 338 aa16■□□□□ 0.15
CMTM1-218ENST00000533915 CYP3A7-CYP3A51PA0A087WV96 503 aa15.99■□□□□ 0.15
CMTM1-218ENST00000533915 SPATA31C2B4DYI2 1134 aa15.99■□□□□ 0.15
CMTM1-218ENST00000533915 MEIS1O00470 390 aa15.99■□□□□ 0.15
CMTM1-218ENST00000533915 ADAMTS3O15072 1205 aa15.99■□□□□ 0.15
CMTM1-218ENST00000533915 MARCH6O60337 910 aa15.99■□□□□ 0.15
CMTM1-218ENST00000533915 CCNT1O60563 726 aaKnown RBP15.99■□□□□ 0.15
CMTM1-218ENST00000533915 CYP3A7P24462 503 aa15.99■□□□□ 0.15
CMTM1-218ENST00000533915 NEDD9Q14511 834 aa15.99■□□□□ 0.15
CMTM1-218ENST00000533915 DUSP28Q4G0W2 176 aa15.99■□□□□ 0.15
CMTM1-218ENST00000533915 TAPT1Q6NXT6 567 aa15.99■□□□□ 0.15
CMTM1-218ENST00000533915 PLA2G4DQ86XP0 818 aa15.99■□□□□ 0.15
CMTM1-218ENST00000533915 SENP7Q9BQF6 1050 aa15.99■□□□□ 0.15
CMTM1-218ENST00000533915 AP5M1Q9H0R1 490 aa15.99■□□□□ 0.15
CMTM1-218ENST00000533915 DDX20Q9UHI6 824 aaKnown RBP15.99■□□□□ 0.15
CMTM1-218ENST00000533915 Q9Y3F1 56 aa15.99■□□□□ 0.15
CMTM1-218ENST00000533915 KIAA0100Q14667 2235 aaKnown RBP15.99■□□□□ 0.15
CMTM1-218ENST00000533915 DUSP11O75319 330 aaKnown RBP15.98■□□□□ 0.15
CMTM1-218ENST00000533915 ITGB5P18084 799 aa15.98■□□□□ 0.15
CMTM1-218ENST00000533915 CCND3P30281 292 aaPredicted RBP15.98■□□□□ 0.15
CMTM1-218ENST00000533915 ADCYAP1R1P41586 468 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms