RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 RRAGCQ9HB90 399 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 GNL3LQ9NVN8 582 aaKnown RBP6.74□□□□□ -1.33
CHKA-208ENST00000533910 STK32BQ9NY57 414 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 DENND2AQ9ULE3 1009 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 PPM1HQ9ULR3 514 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 SLC6A14Q9UN76 642 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 LEMD3Q9Y2U8 911 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 CDK5RAP2Q96SN8 1893 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 ZNF532Q9HCE3 1301 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 FOCADQ5VW36 1801 aa6.73□□□□□ -1.33
CHKA-208ENST00000533910 NAV1Q8NEY1 1877 aa6.73□□□□□ -1.33
CHKA-208ENST00000533910 GPAA1O43292 621 aa6.73□□□□□ -1.33
CHKA-208ENST00000533910 IDH1O75874 414 aaKnown RBP6.73□□□□□ -1.33
CHKA-208ENST00000533910 CYP21A2P08686 494 aa6.73□□□□□ -1.33
CHKA-208ENST00000533910 SRGNP10124 158 aa6.73□□□□□ -1.33
CHKA-208ENST00000533910 NPR1P16066 1061 aa6.73□□□□□ -1.33
CHKA-208ENST00000533910 CASTP20810 708 aaKnown RBP6.73□□□□□ -1.33
CHKA-208ENST00000533910 PSMA5P28066 241 aa6.73□□□□□ -1.33
CHKA-208ENST00000533910 MAP3K12Q12852 859 aa6.73□□□□□ -1.33
CHKA-208ENST00000533910 CAMK2GQ13555 558 aaPredicted RBP6.73□□□□□ -1.33
CHKA-208ENST00000533910 SLC9C2Q5TAH2 1124 aa6.73□□□□□ -1.33
CHKA-208ENST00000533910 PCNX4Q63HM2 1172 aa6.73□□□□□ -1.33
CHKA-208ENST00000533910 RUFY3Q7L099 469 aa6.73□□□□□ -1.33
CHKA-208ENST00000533910 SLC51AQ86UW1 340 aa6.73□□□□□ -1.33
CHKA-208ENST00000533910 GRIN3AQ8TCU5 1115 aa6.73□□□□□ -1.33
CHKA-208ENST00000533910 TMX3Q96JJ7 454 aa6.73□□□□□ -1.33
CHKA-208ENST00000533910 JAKMIP1Q96N16 626 aaKnown RBP6.73□□□□□ -1.33
CHKA-208ENST00000533910 SPOCK3Q9BQ16 436 aa6.73□□□□□ -1.33
CHKA-208ENST00000533910 PUS7LQ9H0K6 701 aaKnown RBP6.73□□□□□ -1.33
CHKA-208ENST00000533910 ALDH8A1Q9H2A2 487 aaPredicted RBP6.73□□□□□ -1.33
CHKA-208ENST00000533910 SLKQ9H2G2 1235 aaPredicted RBP6.73□□□□□ -1.33
CHKA-208ENST00000533910 PIF1Q9H611 641 aa6.73□□□□□ -1.33
CHKA-208ENST00000533910 EFCC1Q9HA90 598 aa6.73□□□□□ -1.33
CHKA-208ENST00000533910 CHMP5Q9NZZ3 219 aa6.73□□□□□ -1.33
CHKA-208ENST00000533910 CYP46A1Q9Y6A2 500 aa6.73□□□□□ -1.33
CHKA-208ENST00000533910 TAF6LQ9Y6J9 622 aa6.73□□□□□ -1.33
CHKA-208ENST00000533910 SNED1Q8TER0 1413 aa6.73□□□□□ -1.33
CHKA-208ENST00000533910 PSME4Q14997 1843 aa6.73□□□□□ -1.33
CHKA-208ENST00000533910 SLX4Q8IY92 1834 aa6.73□□□□□ -1.33
CHKA-208ENST00000533910 SALL1Q9NSC2 1324 aa6.73□□□□□ -1.33
CHKA-208ENST00000533910 BRCA1P38398 1863 aaKnown RBP6.73□□□□□ -1.33
CHKA-208ENST00000533910 AMPD1P23109 780 aa6.72□□□□□ -1.33
CHKA-208ENST00000533910 RPS6KB1P23443 525 aa6.72□□□□□ -1.33
CHKA-208ENST00000533910 HIBADHP31937 336 aaKnown RBP6.72□□□□□ -1.33
CHKA-208ENST00000533910 PDE6BP35913 854 aa6.72□□□□□ -1.33
CHKA-208ENST00000533910 AK2P54819 239 aa6.72□□□□□ -1.33
CHKA-208ENST00000533910 SNRPNP63162 240 aaKnown RBP6.72□□□□□ -1.33
CHKA-208ENST00000533910 GPSM2P81274 684 aa6.72□□□□□ -1.33
CHKA-208ENST00000533910 ALX1Q15699 326 aa6.72□□□□□ -1.33
CHKA-208ENST00000533910 SNAP47Q5SQN1 464 aa6.72□□□□□ -1.33
CHKA-208ENST00000533910 GDF6Q6KF10 455 aaPredicted RBP6.72□□□□□ -1.33
CHKA-208ENST00000533910 BLOC1S2Q6QNY1 142 aa6.72□□□□□ -1.33
CHKA-208ENST00000533910 BNC2Q6ZN30 1099 aaPredicted RBP6.72□□□□□ -1.33
CHKA-208ENST00000533910 STOX1Q6ZVD7 989 aa6.72□□□□□ -1.33
CHKA-208ENST00000533910 VN1R5Q7Z5H4 357 aa6.72□□□□□ -1.33
CHKA-208ENST00000533910 TXNRD3Q86VQ6 643 aa6.72□□□□□ -1.33
CHKA-208ENST00000533910 TEX2Q8IWB9 1127 aa6.72□□□□□ -1.33
CHKA-208ENST00000533910 MICALL1Q8N3F8 863 aa6.72□□□□□ -1.33
CHKA-208ENST00000533910 MAGEB6Q8N7X4 407 aa6.72□□□□□ -1.33
CHKA-208ENST00000533910 NUDT8Q8WV74 236 aa6.72□□□□□ -1.33
CHKA-208ENST00000533910 INTS4Q96HW7 963 aaKnown RBP6.72□□□□□ -1.33
CHKA-208ENST00000533910 STRBPQ96SI9 672 aaKnown RBP6.72□□□□□ -1.33
CHKA-208ENST00000533910 PRDM16Q9HAZ2 1276 aa6.72□□□□□ -1.33
CHKA-208ENST00000533910 CTNNA3Q9UI47 895 aa6.72□□□□□ -1.33
CHKA-208ENST00000533910 ATP6V0A2Q9Y487 856 aa6.72□□□□□ -1.33
CHKA-208ENST00000533910 BAZ2AQ9UIF9 1905 aaKnown RBP6.72□□□□□ -1.33
CHKA-208ENST00000533910 MYH2Q9UKX2 1941 aa6.72□□□□□ -1.33
CHKA-208ENST00000533910 SHISA8B8ZZ34 492 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 SIN3BO75182 1162 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 UFL1O94874 794 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 IL1R1P14778 569 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 CPA1P15085 419 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 ETFBP38117 255 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 ADH7P40394 386 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 PCDH1Q08174 1060 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 COL9A3Q14050 684 aaPredicted RBP6.71□□□□□ -1.34
CHKA-208ENST00000533910 SEPT6Q14141 434 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 RAB3GAP1Q15042 981 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 MSL1Q68DK7 614 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 STYK1Q6J9G0 422 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 ELMSAN1Q6PJG2 1045 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 CCDC81Q6ZN84 652 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 ZNF804AQ7Z570 1209 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 DEFB132Q7Z7B7 95 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 FCHSD1Q86WN1 690 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 SP8Q8IXZ3 490 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 TDRD7Q8NHU6 1098 aaKnown RBP6.71□□□□□ -1.34
CHKA-208ENST00000533910 RASGRP4Q8TDF6 673 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 ZNF384Q8TF68 577 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 BSNDQ8WZ55 320 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 MASTLQ96GX5 879 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 LPIN3Q9BQK8 851 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 ANP32EQ9BTT0 268 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 CEP44Q9C0F1 390 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 ZFYVE1Q9HBF4 777 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 PDRG1Q9NUG6 133 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 GGA1Q9UJY5 639 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 LIMCH1Q9UPQ0 1083 aa6.71□□□□□ -1.34
CHKA-208ENST00000533910 A0A0G2JLW4 131 aa6.7□□□□□ -1.34
CHKA-208ENST00000533910 GREM1O60565 184 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms