RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 RANBP17Q9H2T7 1088 aaKnown RBP14.58□□□□□ -0.08
SVIP-205ENST00000533774 MUTYHQ9UIF7 546 aa14.58□□□□□ -0.08
SVIP-205ENST00000533774 MTMR7Q9Y216 660 aa14.58□□□□□ -0.08
SVIP-205ENST00000533774 LOC102724159A0A0B4J2E5 919 aa14.57□□□□□ -0.08
SVIP-205ENST00000533774 TXNP10599 105 aaKnown RBP14.57□□□□□ -0.08
SVIP-205ENST00000533774 CALML3P27482 149 aa14.57□□□□□ -0.08
SVIP-205ENST00000533774 HTRA4P83105 476 aaPredicted RBP14.57□□□□□ -0.08
SVIP-205ENST00000533774 PWP2Q15269 919 aaKnown RBP14.57□□□□□ -0.08
SVIP-205ENST00000533774 EPC2Q52LR7 807 aa14.57□□□□□ -0.08
SVIP-205ENST00000533774 BRDTQ58F21 947 aaPredicted RBP14.57□□□□□ -0.08
SVIP-205ENST00000533774 IFNL3Q8IZI9 196 aa14.57□□□□□ -0.08
SVIP-205ENST00000533774 CCDC155Q8N6L0 562 aa14.57□□□□□ -0.08
SVIP-205ENST00000533774 BANK1Q8NDB2 785 aa14.57□□□□□ -0.08
SVIP-205ENST00000533774 SP7Q8TDD2 431 aaPredicted RBP14.57□□□□□ -0.08
SVIP-205ENST00000533774 SCFD2Q8WU76 684 aa14.57□□□□□ -0.08
SVIP-205ENST00000533774 AFG1LQ8WV93 481 aa14.57□□□□□ -0.08
SVIP-205ENST00000533774 APPBP2Q92624 585 aa14.57□□□□□ -0.08
SVIP-205ENST00000533774 PABPC5Q96DU9 382 aaKnown RBP14.57□□□□□ -0.08
SVIP-205ENST00000533774 PRKAG3Q9UGI9 489 aa14.57□□□□□ -0.08
SVIP-205ENST00000533774 ZFHX2Q9C0A1 2572 aaPredicted RBP14.56□□□□□ -0.08
SVIP-205ENST00000533774 SMARCA5O60264 1052 aaPredicted RBP14.56□□□□□ -0.08
SVIP-205ENST00000533774 RAB11FIP3O75154 756 aa14.56□□□□□ -0.08
SVIP-205ENST00000533774 MMP3P08254 477 aa14.56□□□□□ -0.08
SVIP-205ENST00000533774 ZNF200P98182 395 aaPredicted RBP14.56□□□□□ -0.08
SVIP-205ENST00000533774 DLX2Q07687 328 aaPredicted RBP14.56□□□□□ -0.08
SVIP-205ENST00000533774 PDE4DQ08499 809 aa14.56□□□□□ -0.08
SVIP-205ENST00000533774 IKBKEQ14164 716 aa14.56□□□□□ -0.08
SVIP-205ENST00000533774 HIC1Q14526 733 aa14.56□□□□□ -0.08
SVIP-205ENST00000533774 ZNF618Q5T7W0 954 aa14.56□□□□□ -0.08
SVIP-205ENST00000533774 CCDC62Q6P9F0 684 aa14.56□□□□□ -0.08
SVIP-205ENST00000533774 EP400NLQ6ZTU2 488 aa14.56□□□□□ -0.08
SVIP-205ENST00000533774 CRBNQ96SW2 442 aa14.56□□□□□ -0.08
SVIP-205ENST00000533774 OSBPL7Q9BZF2 842 aa14.56□□□□□ -0.08
SVIP-205ENST00000533774 ALG13Q9NP73 1137 aaKnown RBP14.56□□□□□ -0.08
SVIP-205ENST00000533774 HDAC6Q9UBN7 1215 aa14.56□□□□□ -0.08
SVIP-205ENST00000533774 GTF2IRD1Q9UHL9 959 aa14.56□□□□□ -0.08
SVIP-205ENST00000533774 INSL6Q9Y581 213 aa14.56□□□□□ -0.08
SVIP-205ENST00000533774 RAD50Q92878 1312 aa14.56□□□□□ -0.08
SVIP-205ENST00000533774 PATL2C9JE40 543 aaKnown RBP14.55□□□□□ -0.08
SVIP-205ENST00000533774 H3BNC9 293 aa14.55□□□□□ -0.08
SVIP-205ENST00000533774 RNF113AO15541 343 aaKnown RBP14.55□□□□□ -0.08
SVIP-205ENST00000533774 LGR5O75473 907 aa14.55□□□□□ -0.08
SVIP-205ENST00000533774 APPP05067 770 aa14.55□□□□□ -0.08
SVIP-205ENST00000533774 ARHGAP1Q07960 439 aa14.55□□□□□ -0.08
SVIP-205ENST00000533774 TCF15Q12870 199 aa14.55□□□□□ -0.08
SVIP-205ENST00000533774 TIGD5Q53EQ6 642 aa14.55□□□□□ -0.08
SVIP-205ENST00000533774 HERC4Q5GLZ8 1057 aaPredicted RBP14.55□□□□□ -0.08
SVIP-205ENST00000533774 BTNL9Q6UXG8 535 aa14.55□□□□□ -0.08
SVIP-205ENST00000533774 KBTBD3Q8NAB2 608 aa14.55□□□□□ -0.08
SVIP-205ENST00000533774 MFSD14AQ96MC6 490 aa14.55□□□□□ -0.08
SVIP-205ENST00000533774 SEC62Q99442 399 aaKnown RBP14.55□□□□□ -0.08
SVIP-205ENST00000533774 ZNF287Q9HBT7 754 aa14.55□□□□□ -0.08
SVIP-205ENST00000533774 STX8Q9UNK0 236 aa14.55□□□□□ -0.08
SVIP-205ENST00000533774 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.55□□□□□ -0.08
SVIP-205ENST00000533774 PTPRZ1P23471 2315 aaPredicted RBP14.55□□□□□ -0.08
SVIP-205ENST00000533774 KIAA1671Q9BY89 1806 aa14.55□□□□□ -0.08
SVIP-205ENST00000533774 PARNO95453 639 aaKnown RBP14.54□□□□□ -0.08
SVIP-205ENST00000533774 RPS6P62753 249 aaKnown RBP14.54□□□□□ -0.08
SVIP-205ENST00000533774 GPM6BQ13491 265 aa14.54□□□□□ -0.08
SVIP-205ENST00000533774 CLUL1Q15846 466 aa14.54□□□□□ -0.08
SVIP-205ENST00000533774 LY6KQ17RY6 165 aa14.54□□□□□ -0.08
SVIP-205ENST00000533774 RNF207Q6ZRF8 634 aa14.54□□□□□ -0.08
SVIP-205ENST00000533774 RPAINQ86UA6 219 aa14.54□□□□□ -0.08
SVIP-205ENST00000533774 RNF135Q8IUD6 432 aa14.54□□□□□ -0.08
SVIP-205ENST00000533774 DBF4BQ8NFT6 615 aa14.54□□□□□ -0.08
SVIP-205ENST00000533774 CLDND1Q9NY35 253 aa14.54□□□□□ -0.08
SVIP-205ENST00000533774 DOCK5Q9H7D0 1870 aa14.53□□□□□ -0.08
SVIP-205ENST00000533774 FOXP2O15409 715 aa14.53□□□□□ -0.08
SVIP-205ENST00000533774 ST18O60284 1047 aa14.53□□□□□ -0.08
SVIP-205ENST00000533774 EFCAB14O75071 495 aa14.53□□□□□ -0.08
SVIP-205ENST00000533774 NOVP48745 357 aa14.53□□□□□ -0.08
SVIP-205ENST00000533774 CTDSPL2Q05D32 466 aa14.53□□□□□ -0.08
SVIP-205ENST00000533774 PDE4BQ07343 736 aa14.53□□□□□ -0.08
SVIP-205ENST00000533774 PPARAQ07869 468 aa14.53□□□□□ -0.08
SVIP-205ENST00000533774 SMAD2Q15796 467 aaKnown RBP14.53□□□□□ -0.08
SVIP-205ENST00000533774 PTPROQ16827 1216 aa14.53□□□□□ -0.08
SVIP-205ENST00000533774 CCDC96Q2M329 555 aa14.53□□□□□ -0.08
SVIP-205ENST00000533774 CTC1Q2NKJ3 1217 aa14.53□□□□□ -0.08
SVIP-205ENST00000533774 SYDE2Q5VT97 1194 aa14.53□□□□□ -0.08
SVIP-205ENST00000533774 TSHZ3Q63HK5 1081 aa14.53□□□□□ -0.08
SVIP-205ENST00000533774 CHST3Q7LGC8 479 aa14.53□□□□□ -0.08
SVIP-205ENST00000533774 MYOCDQ8IZQ8 938 aa14.53□□□□□ -0.08
SVIP-205ENST00000533774 ALG1Q9BT22 464 aa14.53□□□□□ -0.08
SVIP-205ENST00000533774 NSUN3Q9H649 340 aaKnown RBP14.53□□□□□ -0.08
SVIP-205ENST00000533774 CTNNA3Q9UI47 895 aa14.53□□□□□ -0.08
SVIP-205ENST00000533774 FRMPD2Q68DX3 1309 aaPredicted RBP14.52□□□□□ -0.08
SVIP-205ENST00000533774 MBTPS2O43462 519 aa14.52□□□□□ -0.09
SVIP-205ENST00000533774 GNAT2P19087 354 aa14.52□□□□□ -0.09
SVIP-205ENST00000533774 GTF2F1P35269 517 aaKnown RBP eCLIP14.52□□□□□ -0.09
SVIP-205ENST00000533774 PSEN2P49810 448 aa14.52□□□□□ -0.09
SVIP-205ENST00000533774 FXR2P51116 673 aaKnown RBP eCLIP14.52□□□□□ -0.09
SVIP-205ENST00000533774 PTK7Q13308 1070 aa14.52□□□□□ -0.09
SVIP-205ENST00000533774 TMEM192Q8IY95 271 aa14.52□□□□□ -0.09
SVIP-205ENST00000533774 DCAF4Q8WV16 495 aa14.52□□□□□ -0.09
SVIP-205ENST00000533774 TBC1D5Q92609 795 aa14.52□□□□□ -0.09
SVIP-205ENST00000533774 EDAQ92838 391 aa14.52□□□□□ -0.09
SVIP-205ENST00000533774 GPCPD1Q9NPB8 672 aa14.52□□□□□ -0.09
SVIP-205ENST00000533774 ZBTB40Q9NUA8 1239 aa14.52□□□□□ -0.09
SVIP-205ENST00000533774 FAM86C1Q9NVL1 165 aa14.52□□□□□ -0.09
SVIP-205ENST00000533774 MYO15AQ9UKN7 3530 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms