RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 NFRKBQ6P4R8 1299 aa16.38■□□□□ 0.21
CAPN1-224ENST00000533129 DTHD1Q6ZMT9 781 aa16.38■□□□□ 0.21
CAPN1-224ENST00000533129 RPAINQ86UA6 219 aa16.38■□□□□ 0.21
CAPN1-224ENST00000533129 NOC4LQ9BVI4 516 aaKnown RBP16.38■□□□□ 0.21
CAPN1-224ENST00000533129 CCSER1Q9C0I3 900 aa16.38■□□□□ 0.21
CAPN1-224ENST00000533129 MAGEF1Q9HAY2 307 aa16.38■□□□□ 0.21
CAPN1-224ENST00000533129 MYH10P35580 1976 aa16.38■□□□□ 0.21
CAPN1-224ENST00000533129 MAGEB6P1A0A0J9YX57 407 aa16.38■□□□□ 0.21
CAPN1-224ENST00000533129 MAP2K2P36507 400 aa16.38■□□□□ 0.21
CAPN1-224ENST00000533129 MATR3P43243 847 aaKnown RBP eCLIP16.38■□□□□ 0.214e-6■□□□□ 9.5
CAPN1-224ENST00000533129 KIF11P52732 1056 aa16.38■□□□□ 0.21
CAPN1-224ENST00000533129 TMED8Q6PL24 325 aaPredicted RBP16.38■□□□□ 0.21
CAPN1-224ENST00000533129 C15orf52Q6ZUT6 534 aaKnown RBP16.38■□□□□ 0.21
CAPN1-224ENST00000533129 GPATCH11Q8N954 259 aa16.38■□□□□ 0.21
CAPN1-224ENST00000533129 RASSF8Q8NHQ8 419 aa16.38■□□□□ 0.21
CAPN1-224ENST00000533129 EPN3Q9H201 632 aa16.38■□□□□ 0.21
CAPN1-224ENST00000533129 ARHGAP20Q9P2F6 1191 aa16.38■□□□□ 0.21
CAPN1-224ENST00000533129 BAZ2AQ9UIF9 1905 aaKnown RBP16.38■□□□□ 0.21
CAPN1-224ENST00000533129 PLEKP08567 350 aaPredicted RBP16.38■□□□□ 0.21
CAPN1-224ENST00000533129 TMC4Q7Z404 712 aa16.38■□□□□ 0.21
CAPN1-224ENST00000533129 CD302Q8IX05 232 aa16.38■□□□□ 0.21
CAPN1-224ENST00000533129 IFT20Q8IY31 132 aa16.38■□□□□ 0.21
CAPN1-224ENST00000533129 IQCKQ8N0W5 287 aa16.38■□□□□ 0.21
CAPN1-224ENST00000533129 MREGQ8N565 214 aa16.38■□□□□ 0.21
CAPN1-224ENST00000533129 C1orf131Q8NDD1 294 aaKnown RBP16.38■□□□□ 0.21
CAPN1-224ENST00000533129 BRIP1Q9BX63 1249 aa16.38■□□□□ 0.21
CAPN1-224ENST00000533129 CUEDC2Q9H467 287 aa16.38■□□□□ 0.21
CAPN1-224ENST00000533129 TSKSQ9UJT2 592 aa16.38■□□□□ 0.21
CAPN1-224ENST00000533129 PJA2O43164 708 aa16.37■□□□□ 0.21
CAPN1-224ENST00000533129 LSP1P33241 339 aa16.37■□□□□ 0.21
CAPN1-224ENST00000533129 ADGRA1Q86SQ6 560 aa16.37■□□□□ 0.21
CAPN1-224ENST00000533129 FBXO41Q8TF61 875 aa16.37■□□□□ 0.21
CAPN1-224ENST00000533129 CCDC47Q96A33 483 aaKnown RBP16.37■□□□□ 0.21
CAPN1-224ENST00000533129 CXorf56Q9H5V9 222 aa16.37■□□□□ 0.21
CAPN1-224ENST00000533129 GDF3Q9NR23 364 aa16.37■□□□□ 0.21
CAPN1-224ENST00000533129 RNF14Q9UBS8 474 aa16.37■□□□□ 0.21
CAPN1-224ENST00000533129 GGA2Q9UJY4 613 aa16.37■□□□□ 0.21
CAPN1-224ENST00000533129 SRRM3A6NNA2 597 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-224ENST00000533129 SMIM22K7EJ46 135 aa16.37■□□□□ 0.21
CAPN1-224ENST00000533129 UBA7P41226 1012 aa16.37■□□□□ 0.21
CAPN1-224ENST00000533129 NAP1L1P55209 391 aaKnown RBP16.37■□□□□ 0.21
CAPN1-224ENST00000533129 CFAP58Q5T655 872 aa16.37■□□□□ 0.21
CAPN1-224ENST00000533129 ANKRD40Q6AI12 368 aa16.37■□□□□ 0.21
CAPN1-224ENST00000533129 TYW1BQ6NUM6 668 aa16.37■□□□□ 0.21
CAPN1-224ENST00000533129 BLIDQ8IZY5 108 aa16.37■□□□□ 0.21
CAPN1-224ENST00000533129 H0YHG0 523 aa16.36■□□□□ 0.21
CAPN1-224ENST00000533129 ATP2B4P23634 1241 aa16.36■□□□□ 0.21
CAPN1-224ENST00000533129 PAK2Q13177 524 aa16.36■□□□□ 0.21
CAPN1-224ENST00000533129 NAA35Q5VZE5 725 aa16.36■□□□□ 0.21
CAPN1-224ENST00000533129 C2CD5Q86YS7 1000 aa16.36■□□□□ 0.21
CAPN1-224ENST00000533129 SH2D3CQ8N5H7 860 aa16.36■□□□□ 0.21
CAPN1-224ENST00000533129 TACO1Q9BSH4 297 aaKnown RBP16.36■□□□□ 0.21
CAPN1-224ENST00000533129 RBM12Q9NTZ6 932 aaKnown RBP16.36■□□□□ 0.21
CAPN1-224ENST00000533129 ADAMTS3O15072 1205 aa16.36■□□□□ 0.21
CAPN1-224ENST00000533129 KRT14P02533 472 aa16.36■□□□□ 0.21
CAPN1-224ENST00000533129 RNPC3Q96LT9 517 aaKnown RBP16.36■□□□□ 0.21
CAPN1-224ENST00000533129 CACNA1SQ13698 1873 aa16.36■□□□□ 0.21
CAPN1-224ENST00000533129 EIF4A3P38919 411 aaKnown RBP16.35■□□□□ 0.21
CAPN1-224ENST00000533129 ATP1A2P50993 1020 aa16.35■□□□□ 0.21
CAPN1-224ENST00000533129 GPSM2P81274 684 aa16.35■□□□□ 0.21
CAPN1-224ENST00000533129 MRPS25P82663 173 aaKnown RBP16.35■□□□□ 0.21
CAPN1-224ENST00000533129 CFAP221Q4G0U5 840 aa16.35■□□□□ 0.21
CAPN1-224ENST00000533129 COBLL1Q53SF7 1204 aa16.35■□□□□ 0.21
CAPN1-224ENST00000533129 CCDC43Q96MW1 224 aaKnown RBP16.35■□□□□ 0.21
CAPN1-224ENST00000533129 RIOK1Q9BRS2 568 aaKnown RBP16.35■□□□□ 0.21
CAPN1-224ENST00000533129 SH3GLB2Q9NR46 395 aa16.35■□□□□ 0.21
CAPN1-224ENST00000533129 MAST2Q6P0Q8 1798 aa16.35■□□□□ 0.21
CAPN1-224ENST00000533129 LRRC37AA6NMS7 1700 aa16.35■□□□□ 0.21
CAPN1-224ENST00000533129 ZNF233A6NK53 670 aa16.35■□□□□ 0.21
CAPN1-224ENST00000533129 PP2D1A8MPX8 630 aa16.35■□□□□ 0.21
CAPN1-224ENST00000533129 AKR1B10O60218 316 aa16.35■□□□□ 0.21
CAPN1-224ENST00000533129 PPP1R37O75864 691 aa16.35■□□□□ 0.21
CAPN1-224ENST00000533129 CXCR5P32302 372 aa16.35■□□□□ 0.21
CAPN1-224ENST00000533129 PLCB4Q15147 1175 aa16.35■□□□□ 0.21
CAPN1-224ENST00000533129 ZNF804AQ7Z570 1209 aa16.35■□□□□ 0.21
CAPN1-224ENST00000533129 TXNRD3Q86VQ6 643 aa16.35■□□□□ 0.21
CAPN1-224ENST00000533129 TLR10Q9BXR5 811 aa16.35■□□□□ 0.21
CAPN1-224ENST00000533129 SMARCAL1Q9NZC9 954 aa16.35■□□□□ 0.21
CAPN1-224ENST00000533129 PCDHA4Q9UN74 947 aa16.35■□□□□ 0.21
CAPN1-224ENST00000533129 SIK3Q9Y2K2 1263 aa16.35■□□□□ 0.21
CAPN1-224ENST00000533129 ANKRD31Q8N7Z5 1873 aa16.35■□□□□ 0.21
CAPN1-224ENST00000533129 FAM205AQ6ZU69 1335 aa16.35■□□□□ 0.21
CAPN1-224ENST00000533129 MYO1FO00160 1098 aa16.34■□□□□ 0.21
CAPN1-224ENST00000533129 LAD1O00515 517 aa16.34■□□□□ 0.21
CAPN1-224ENST00000533129 NR1D1P20393 614 aa16.34■□□□□ 0.21
CAPN1-224ENST00000533129 PTGISQ16647 500 aa16.34■□□□□ 0.21
CAPN1-224ENST00000533129 KCTD16Q68DU8 428 aa16.34■□□□□ 0.21
CAPN1-224ENST00000533129 RNF10Q8N5U6 811 aaKnown RBP16.34■□□□□ 0.21
CAPN1-224ENST00000533129 ZNF473Q8WTR7 871 aaKnown RBP16.34■□□□□ 0.21
CAPN1-224ENST00000533129 EHD2Q9NZN4 543 aa16.34■□□□□ 0.21
CAPN1-224ENST00000533129 MAGEA1P43355 309 aa16.34■□□□□ 0.21
CAPN1-224ENST00000533129 PDE4DQ08499 809 aa16.34■□□□□ 0.21
CAPN1-224ENST00000533129 TEX2Q8IWB9 1127 aa16.34■□□□□ 0.21
CAPN1-224ENST00000533129 PSMB7Q99436 277 aa16.34■□□□□ 0.21
CAPN1-224ENST00000533129 GGA1Q9UJY5 639 aa16.34■□□□□ 0.21
CAPN1-224ENST00000533129 LAMB1P07942 1786 aa16.34■□□□□ 0.21
CAPN1-224ENST00000533129 MMP10P09238 476 aa16.33■□□□□ 0.21
CAPN1-224ENST00000533129 PRPHP41219 470 aa16.33■□□□□ 0.21
CAPN1-224ENST00000533129 MMP14P50281 582 aa16.33■□□□□ 0.21
CAPN1-224ENST00000533129 SPTY2D1Q68D10 685 aaPredicted RBP16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms