RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 A0A087WWV3 80 aa20.93■□□□□ 0.94
SMPD1-208ENST00000533123 CLCN1P35523 988 aa20.93■□□□□ 0.94
SMPD1-208ENST00000533123 CCNA1P78396 465 aa20.93■□□□□ 0.94
SMPD1-208ENST00000533123 PTGDRQ13258 359 aa20.93■□□□□ 0.94
SMPD1-208ENST00000533123 FAM110CQ1W6H9 321 aa20.93■□□□□ 0.94
SMPD1-208ENST00000533123 SASS6Q6UVJ0 657 aa20.93■□□□□ 0.94
SMPD1-208ENST00000533123 MROH8Q9H579 483 aa20.93■□□□□ 0.94
SMPD1-208ENST00000533123 FAM237AA0A1B0GTK4 181 aa20.93■□□□□ 0.94
SMPD1-208ENST00000533123 COPB2P35606 906 aa20.93■□□□□ 0.94
SMPD1-208ENST00000533123 CRHR2Q13324 411 aa20.93■□□□□ 0.94
SMPD1-208ENST00000533123 ANO6Q4KMQ2 910 aa20.93■□□□□ 0.94
SMPD1-208ENST00000533123 RMDN3Q96TC7 470 aa20.93■□□□□ 0.94
SMPD1-208ENST00000533123 CSRNP2Q9H175 543 aa20.93■□□□□ 0.94
SMPD1-208ENST00000533123 ZFYVE28Q9HCC9 887 aa20.93■□□□□ 0.94
SMPD1-208ENST00000533123 ADGRA2Q96PE1 1338 aa20.93■□□□□ 0.94
SMPD1-208ENST00000533123 CEP350Q5VT06 3117 aa20.92■□□□□ 0.94
SMPD1-208ENST00000533123 TLR2O60603 784 aa20.92■□□□□ 0.94
SMPD1-208ENST00000533123 VEGFBP49765 207 aa20.92■□□□□ 0.94
SMPD1-208ENST00000533123 USP11P51784 963 aa20.92■□□□□ 0.94
SMPD1-208ENST00000533123 USP49Q70CQ1 688 aa20.92■□□□□ 0.94
SMPD1-208ENST00000533123 KCNH3Q9ULD8 1083 aa20.92■□□□□ 0.94
SMPD1-208ENST00000533123 SHCBP1Q8NEM2 672 aa20.92■□□□□ 0.94
SMPD1-208ENST00000533123 ZFP91Q96JP5 570 aaPredicted RBP20.92■□□□□ 0.94
SMPD1-208ENST00000533123 ECM2O94769 699 aaPredicted RBP20.91■□□□□ 0.94
SMPD1-208ENST00000533123 BCRP11274 1271 aa20.91■□□□□ 0.94
SMPD1-208ENST00000533123 EIF2AK2P19525 551 aaKnown RBP20.91■□□□□ 0.94
SMPD1-208ENST00000533123 CNTN2Q02246 1040 aa20.91■□□□□ 0.94
SMPD1-208ENST00000533123 TMEM60Q9H2L4 133 aa20.91■□□□□ 0.94
SMPD1-208ENST00000533123 EHMT1Q9H9B1 1298 aa20.91■□□□□ 0.94
SMPD1-208ENST00000533123 SLC37A4O43826 429 aa20.9■□□□□ 0.94
SMPD1-208ENST00000533123 ATP2C1P98194 919 aaPredicted RBP20.9■□□□□ 0.94
SMPD1-208ENST00000533123 PPP4R3AQ6IN85 833 aa20.9■□□□□ 0.94
SMPD1-208ENST00000533123 C17orf99Q6UX52 265 aa20.9■□□□□ 0.94
SMPD1-208ENST00000533123 C4orf32Q8N8J7 132 aa20.9■□□□□ 0.94
SMPD1-208ENST00000533123 ANP32BQ92688 251 aaKnown RBP20.9■□□□□ 0.94
SMPD1-208ENST00000533123 MMP19Q99542 508 aa20.9■□□□□ 0.94
SMPD1-208ENST00000533123 PFASO15067 1338 aa20.9■□□□□ 0.94
SMPD1-208ENST00000533123 CA12O43570 354 aa20.9■□□□□ 0.94
SMPD1-208ENST00000533123 BMP15O95972 392 aa20.9■□□□□ 0.94
SMPD1-208ENST00000533123 KCTD2Q14681 263 aa20.9■□□□□ 0.94
SMPD1-208ENST00000533123 ARHGEF16Q5VV41 709 aa20.9■□□□□ 0.94
SMPD1-208ENST00000533123 POTEDQ86YR6 584 aa20.9■□□□□ 0.94
SMPD1-208ENST00000533123 ZNF579Q8NAF0 562 aaKnown RBP20.9■□□□□ 0.94
SMPD1-208ENST00000533123 IL31RAQ8NI17 732 aa20.9■□□□□ 0.94
SMPD1-208ENST00000533123 DNAJC25Q9H1X3 360 aa20.9■□□□□ 0.94
SMPD1-208ENST00000533123 PXMP2Q9NR77 195 aa20.9■□□□□ 0.94
SMPD1-208ENST00000533123 MORC2Q9Y6X9 1032 aaPredicted RBP20.9■□□□□ 0.94
SMPD1-208ENST00000533123 RPTORQ8N122 1335 aa20.9■□□□□ 0.94
SMPD1-208ENST00000533123 FAM86B1E9PN63 330 aa20.89■□□□□ 0.94
SMPD1-208ENST00000533123 NEMFO60524 1076 aa20.89■□□□□ 0.94
SMPD1-208ENST00000533123 PGK2P07205 417 aa20.89■□□□□ 0.94
SMPD1-208ENST00000533123 FAM86B2P0C5J1 330 aa20.89■□□□□ 0.94
SMPD1-208ENST00000533123 FCER1AP12319 257 aa20.89■□□□□ 0.94
SMPD1-208ENST00000533123 LONRF3Q496Y0 759 aa20.89■□□□□ 0.94
SMPD1-208ENST00000533123 CYP2W1Q8TAV3 490 aa20.89■□□□□ 0.94
SMPD1-208ENST00000533123 MAF1Q9H063 256 aa20.89■□□□□ 0.94
SMPD1-208ENST00000533123 DDX25Q9UHL0 483 aaKnown RBP20.89■□□□□ 0.94
SMPD1-208ENST00000533123 CYP3A4P08684 503 aa20.89■□□□□ 0.93
SMPD1-208ENST00000533123 ZNF76P36508 570 aa20.89■□□□□ 0.93
SMPD1-208ENST00000533123 PGM5Q15124 567 aa20.89■□□□□ 0.93
SMPD1-208ENST00000533123 VWA3AA6NCI4 1184 aa20.88■□□□□ 0.93
SMPD1-208ENST00000533123 POTEB2H3BUK9 544 aa20.88■□□□□ 0.93
SMPD1-208ENST00000533123 ALDH1A1P00352 501 aa20.88■□□□□ 0.93
SMPD1-208ENST00000533123 FAM200AQ8TCP9 573 aa20.88■□□□□ 0.93
SMPD1-208ENST00000533123 EPSTI1Q96J88 318 aa20.88■□□□□ 0.93
SMPD1-208ENST00000533123 TIGD1Q96MW7 591 aa20.88■□□□□ 0.93
SMPD1-208ENST00000533123 UIMC1Q96RL1 719 aa20.88■□□□□ 0.93
SMPD1-208ENST00000533123 PDCD2LQ9BRP1 358 aa20.88■□□□□ 0.93
SMPD1-208ENST00000533123 FAM13BQ9NYF5 915 aa20.88■□□□□ 0.93
SMPD1-208ENST00000533123 FRMPD4Q14CM0 1322 aa20.88■□□□□ 0.93
SMPD1-208ENST00000533123 CYP3A7-CYP3A51PA0A087WV96 503 aa20.88■□□□□ 0.93
SMPD1-208ENST00000533123 GCFC2P16383 781 aaKnown RBP20.88■□□□□ 0.93
SMPD1-208ENST00000533123 CYP3A7P24462 503 aa20.88■□□□□ 0.93
SMPD1-208ENST00000533123 CCDC173Q0VFZ6 552 aa20.88■□□□□ 0.93
SMPD1-208ENST00000533123 IL17AQ16552 155 aa20.88■□□□□ 0.93
SMPD1-208ENST00000533123 PRR16Q569H4 304 aa20.88■□□□□ 0.93
SMPD1-208ENST00000533123 C11orf57Q6ZUT1 292 aaPredicted RBP20.88■□□□□ 0.93
SMPD1-208ENST00000533123 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.88■□□□□ 0.93
SMPD1-208ENST00000533123 LUZP1Q86V48 1076 aa20.88■□□□□ 0.93
SMPD1-208ENST00000533123 REM2Q8IYK8 340 aaPredicted RBP20.88■□□□□ 0.93
SMPD1-208ENST00000533123 NSUN6Q8TEA1 469 aaKnown RBP20.88■□□□□ 0.93
SMPD1-208ENST00000533123 FERMT2Q96AC1 680 aa20.88■□□□□ 0.93
SMPD1-208ENST00000533123 LCTP09848 1927 aa20.87■□□□□ 0.93
SMPD1-208ENST00000533123 ASTN1O14525 1302 aa20.87■□□□□ 0.93
SMPD1-208ENST00000533123 POLR2DO15514 142 aaKnown RBP20.87■□□□□ 0.93
SMPD1-208ENST00000533123 MYCLP12524 364 aaPredicted RBP20.87■□□□□ 0.93
SMPD1-208ENST00000533123 CIITAP33076 1130 aa20.87■□□□□ 0.93
SMPD1-208ENST00000533123 MAP2K2P36507 400 aa20.87■□□□□ 0.93
SMPD1-208ENST00000533123 GPR142Q7Z601 462 aa20.87■□□□□ 0.93
SMPD1-208ENST00000533123 PDILTQ8N807 584 aa20.87■□□□□ 0.93
SMPD1-208ENST00000533123 PPP1R9BQ96SB3 815 aa20.87■□□□□ 0.93
SMPD1-208ENST00000533123 NAP1L4Q99733 375 aaKnown RBP20.87■□□□□ 0.93
SMPD1-208ENST00000533123 CBX8Q9HC52 389 aa20.87■□□□□ 0.93
SMPD1-208ENST00000533123 KIAA1468Q9P260 1216 aa20.87■□□□□ 0.93
SMPD1-208ENST00000533123 ZNFX1Q9P2E3 1918 aaKnown RBP20.87■□□□□ 0.93
SMPD1-208ENST00000533123 MRPS9P82933 396 aaKnown RBP20.86■□□□□ 0.93
SMPD1-208ENST00000533123 ORC2Q13416 577 aaPredicted RBP20.86■□□□□ 0.93
SMPD1-208ENST00000533123 STX1AQ16623 288 aa20.86■□□□□ 0.93
SMPD1-208ENST00000533123 UVSSAQ2YD98 709 aa20.86■□□□□ 0.93
SMPD1-208ENST00000533123 PCNX4Q63HM2 1172 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms