RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 CLTBP09497 229 aa2.2□□□□□ -2.06
KNL1-211ENST00000533001 GOLGA2Q08379 1002 aa2.2□□□□□ -2.06
KNL1-211ENST00000533001 PLEKHH3Q7Z736 793 aa2.2□□□□□ -2.06
KNL1-211ENST00000533001 ZNF598Q86UK7 904 aaKnown RBP2.2□□□□□ -2.06
KNL1-211ENST00000533001 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.2□□□□□ -2.061e-6■□□□□ 11.3
KNL1-211ENST00000533001 SDR42E1Q8WUS8 393 aa2.2□□□□□ -2.06
KNL1-211ENST00000533001 FAM217BQ9NTX9 383 aaPredicted RBP2.2□□□□□ -2.06
KNL1-211ENST00000533001 GINM1Q9NU53 330 aa2.2□□□□□ -2.06
KNL1-211ENST00000533001 C19orf81C9J6K1 198 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 FSCN2O14926 492 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 DHX15O43143 795 aaKnown RBP2.19□□□□□ -2.06
KNL1-211ENST00000533001 MAPK4P31152 587 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 ADD2P35612 726 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 VPS53Q5VIR6 699 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 CXCL17Q6UXB2 119 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 FOXP4Q8IVH2 680 aaPredicted RBP2.19□□□□□ -2.06
KNL1-211ENST00000533001 CCDC144CPQ8IYA2 1237 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 RASGRP4Q8TDF6 673 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 UHRF1Q96T88 793 aaPredicted RBP2.19□□□□□ -2.06
KNL1-211ENST00000533001 SEC62Q99442 399 aaKnown RBP2.19□□□□□ -2.06
KNL1-211ENST00000533001 NUP88Q99567 741 aaPredicted RBP2.19□□□□□ -2.06
KNL1-211ENST00000533001 DDX23Q9BUQ8 820 aaKnown RBP2.19□□□□□ -2.06
KNL1-211ENST00000533001 PCDHA11Q9Y5I1 949 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 MYH10P35580 1976 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 TNRC6AQ8NDV7 1962 aaKnown RBP2.19□□□□□ -2.06
KNL1-211ENST00000533001 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.19□□□□□ -2.06
KNL1-211ENST00000533001 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.19□□□□□ -2.06
KNL1-211ENST00000533001 MEIS3P2A8K0S8 358 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 GRM6O15303 877 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 GTF2E1P29083 439 aaPredicted RBP2.19□□□□□ -2.06
KNL1-211ENST00000533001 IL15P40933 162 aaPredicted RBP2.19□□□□□ -2.06
KNL1-211ENST00000533001 ATN1P54259 1190 aaPredicted RBP2.19□□□□□ -2.06
KNL1-211ENST00000533001 PAXIP1Q6ZW49 1069 aaPredicted RBP2.19□□□□□ -2.06
KNL1-211ENST00000533001 HERC6Q8IVU3 1022 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 MICALL1Q8N3F8 863 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 DCBLD2Q96PD2 775 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 MKNK1Q9BUB5 465 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 MTMR4Q9NYA4 1195 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 LMCD1Q9NZU5 365 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 PCDHB15Q9Y5E8 787 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 LILRB5O75023 590 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 CHRNA1P02708 482 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 ADAM15Q13444 863 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 GDF6Q6KF10 455 aaPredicted RBP2.19□□□□□ -2.06
KNL1-211ENST00000533001 TIFAQ96CG3 184 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 PARD6AQ9NPB6 346 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 RXFP3Q9NSD7 469 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 SYNPO2Q9UMS6 1093 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 NYNRINQ9P2P1 1898 aaKnown RBP2.19□□□□□ -2.06
KNL1-211ENST00000533001 KRBA1A5PL33 1030 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 M0R2N6 131 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 NMT2O60551 498 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 BRD1O95696 1058 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 ZNF200P98182 395 aaPredicted RBP2.19□□□□□ -2.06
KNL1-211ENST00000533001 COASYQ13057 564 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 DSC3Q14574 896 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 DUSP28Q4G0W2 176 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 ZNF804AQ7Z570 1209 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 MSL3Q8N5Y2 521 aaKnown RBP2.19□□□□□ -2.06
KNL1-211ENST00000533001 RAET1EQ8TD07 263 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 DPF3Q92784 378 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 FERMT2Q96AC1 680 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 IL23AQ9NPF7 189 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 ANAPC4Q9UJX5 808 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 NUDCQ9Y266 331 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 Q9Y3F1 56 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 MBTPS2O43462 519 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 BEX3Q00994 111 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 FKBP5Q13451 457 aaPredicted RBP2.19□□□□□ -2.06
KNL1-211ENST00000533001 MAPKAPK5Q8IW41 473 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 EZH1Q92800 747 aaPredicted RBP2.19□□□□□ -2.06
KNL1-211ENST00000533001 GMCL1Q96IK5 515 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 RANBP17Q9H2T7 1088 aaKnown RBP2.19□□□□□ -2.06
KNL1-211ENST00000533001 CWH43Q9H720 699 aa2.19□□□□□ -2.06
KNL1-211ENST00000533001 PCSK5Q92824 1860 aa2.18□□□□□ -2.06
KNL1-211ENST00000533001 ITGB5P18084 799 aa2.18□□□□□ -2.06
KNL1-211ENST00000533001 COG2Q14746 738 aa2.18□□□□□ -2.06
KNL1-211ENST00000533001 SLC30A10Q6XR72 485 aa2.18□□□□□ -2.06
KNL1-211ENST00000533001 ALYREFQ86V81 257 aaKnown RBP2.18□□□□□ -2.06
KNL1-211ENST00000533001 TMEM57Q8N5G2 664 aa2.18□□□□□ -2.06
KNL1-211ENST00000533001 EDAQ92838 391 aa2.18□□□□□ -2.06
KNL1-211ENST00000533001 NUDT12Q9BQG2 462 aa2.18□□□□□ -2.06
KNL1-211ENST00000533001 RPAP3Q9H6T3 665 aaPredicted RBP2.18□□□□□ -2.06
KNL1-211ENST00000533001 CDHR5Q9HBB8 845 aa2.18□□□□□ -2.06
KNL1-211ENST00000533001 HCN2Q9UL51 889 aa2.18□□□□□ -2.06
KNL1-211ENST00000533001 TAOK2Q9UL54 1235 aa2.18□□□□□ -2.06
KNL1-211ENST00000533001 F5H6K3 240 aa2.18□□□□□ -2.06
KNL1-211ENST00000533001 H3BNC9 293 aa2.18□□□□□ -2.06
KNL1-211ENST00000533001 DGKIO75912 1065 aa2.18□□□□□ -2.06
KNL1-211ENST00000533001 C1QL1O75973 258 aa2.18□□□□□ -2.06
KNL1-211ENST00000533001 PSMC6P62333 389 aa2.18□□□□□ -2.06
KNL1-211ENST00000533001 KLRC3Q07444 240 aa2.18□□□□□ -2.06
KNL1-211ENST00000533001 TROAPQ12815 778 aa2.18□□□□□ -2.06
KNL1-211ENST00000533001 INPP4AQ96PE3 977 aaPredicted RBP2.18□□□□□ -2.06
KNL1-211ENST00000533001 CDKN2AIPQ9NXV6 580 aaPredicted RBP2.18□□□□□ -2.06
KNL1-211ENST00000533001 AATFQ9NY61 560 aaKnown RBP eCLIP2.18□□□□□ -2.06
KNL1-211ENST00000533001 FARP1Q9Y4F1 1045 aaPredicted RBP2.18□□□□□ -2.06
KNL1-211ENST00000533001 NR2E3Q9Y5X4 410 aa2.18□□□□□ -2.06
KNL1-211ENST00000533001 CSPG4Q6UVK1 2322 aa2.18□□□□□ -2.06
KNL1-211ENST00000533001 CROCCQ5TZA2 2017 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms