RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 A0A0U1RQG5 324 aaPredicted RBP17.7■□□□□ 0.42
CPSF1-210ENST00000532935 CCDC196A0A1B0GTZ2 297 aa17.7■□□□□ 0.42
CPSF1-210ENST00000532935 MEIS2O14770 477 aa17.7■□□□□ 0.42
CPSF1-210ENST00000532935 CCND2P30279 289 aa17.7■□□□□ 0.42
CPSF1-210ENST00000532935 ADD1P35611 737 aaKnown RBP17.7■□□□□ 0.42
CPSF1-210ENST00000532935 LY6KQ17RY6 165 aa17.7■□□□□ 0.42
CPSF1-210ENST00000532935 ANKRD33Q7Z3H0 272 aa17.7■□□□□ 0.42
CPSF1-210ENST00000532935 PSTPIP2Q9H939 334 aa17.7■□□□□ 0.42
CPSF1-210ENST00000532935 PRDM5Q9NQX1 630 aaPredicted RBP17.7■□□□□ 0.42
CPSF1-210ENST00000532935 V9GY48 417 aaPredicted RBP17.7■□□□□ 0.42
CPSF1-210ENST00000532935 ARVCFO00192 962 aa17.69■□□□□ 0.42
CPSF1-210ENST00000532935 CLTBP09497 229 aa17.69■□□□□ 0.42
CPSF1-210ENST00000532935 CDK7P50613 346 aa17.69■□□□□ 0.42
CPSF1-210ENST00000532935 EVCP57679 992 aa17.69■□□□□ 0.42
CPSF1-210ENST00000532935 BRDTQ58F21 947 aaPredicted RBP17.69■□□□□ 0.42
CPSF1-210ENST00000532935 WWC2Q6AWC2 1192 aa17.69■□□□□ 0.42
CPSF1-210ENST00000532935 SH3RF1Q7Z6J0 888 aa17.69■□□□□ 0.42
CPSF1-210ENST00000532935 TOX2Q96NM4 488 aa17.69■□□□□ 0.42
CPSF1-210ENST00000532935 UPF3BQ9BZI7 483 aaKnown RBP17.69■□□□□ 0.42
CPSF1-210ENST00000532935 POLR3EQ9NVU0 708 aa17.69■□□□□ 0.42
CPSF1-210ENST00000532935 DDX41Q9UJV9 622 aaKnown RBP17.69■□□□□ 0.42
CPSF1-210ENST00000532935 MRVI1Q9Y6F6 885 aa17.69■□□□□ 0.42
CPSF1-210ENST00000532935 MROH7Q68CQ1 1323 aa17.69■□□□□ 0.42
CPSF1-210ENST00000532935 LAMA3Q16787 3333 aa17.68■□□□□ 0.42
CPSF1-210ENST00000532935 A6NJR5 290 aa17.68■□□□□ 0.42
CPSF1-210ENST00000532935 DCDC2CA8MYV0 355 aa17.68■□□□□ 0.42
CPSF1-210ENST00000532935 EIF5BO60841 1220 aaKnown RBP17.68■□□□□ 0.42
CPSF1-210ENST00000532935 RGS20O76081 388 aa17.68■□□□□ 0.42
CPSF1-210ENST00000532935 GH1P01241 217 aa17.68■□□□□ 0.42
CPSF1-210ENST00000532935 BMP8BP34820 402 aa17.68■□□□□ 0.42
CPSF1-210ENST00000532935 MDM2Q00987 491 aaPredicted RBP17.68■□□□□ 0.42
CPSF1-210ENST00000532935 ARHGAP1Q07960 439 aa17.68■□□□□ 0.42
CPSF1-210ENST00000532935 TOB2Q14106 344 aaPredicted RBP17.68■□□□□ 0.42
CPSF1-210ENST00000532935 TRIM43BA6NCK2 446 aa17.67■□□□□ 0.42
CPSF1-210ENST00000532935 hCG_1984214I3L0E3 225 aa17.67■□□□□ 0.42
CPSF1-210ENST00000532935 MYL3P08590 195 aa17.67■□□□□ 0.42
CPSF1-210ENST00000532935 PDIA3P30101 505 aaKnown RBP17.67■□□□□ 0.42
CPSF1-210ENST00000532935 MRPS9P82933 396 aaKnown RBP17.67■□□□□ 0.42
CPSF1-210ENST00000532935 PURAQ00577 322 aaKnown RBP17.67■□□□□ 0.42
CPSF1-210ENST00000532935 FAAP100Q0VG06 881 aa17.67■□□□□ 0.42
CPSF1-210ENST00000532935 ITGA7Q13683 1181 aa17.67■□□□□ 0.42
CPSF1-210ENST00000532935 UBE2SQ16763 222 aa17.67■□□□□ 0.42
CPSF1-210ENST00000532935 TYW1BQ6NUM6 668 aa17.67■□□□□ 0.42
CPSF1-210ENST00000532935 PPP1R18Q6NYC8 613 aa17.67■□□□□ 0.42
CPSF1-210ENST00000532935 KCNV1Q6PIU1 500 aa17.67■□□□□ 0.42
CPSF1-210ENST00000532935 ZNF713Q8N859 430 aaPredicted RBP17.67■□□□□ 0.42
CPSF1-210ENST00000532935 SLC43A3Q8NBI5 491 aa17.67■□□□□ 0.42
CPSF1-210ENST00000532935 TRIM43Q96BQ3 446 aaPredicted RBP17.67■□□□□ 0.42
CPSF1-210ENST00000532935 ZFP91Q96JP5 570 aaPredicted RBP17.67■□□□□ 0.42
CPSF1-210ENST00000532935 LBHD1Q9BQE6 289 aaPredicted RBP17.67■□□□□ 0.42
CPSF1-210ENST00000532935 GRIN2DO15399 1336 aa17.67■□□□□ 0.42
CPSF1-210ENST00000532935 A0A1W2PPC1 479 aa17.66■□□□□ 0.42
CPSF1-210ENST00000532935 STXBP3O00186 592 aa17.66■□□□□ 0.42
CPSF1-210ENST00000532935 KIAA0355O15063 1070 aa17.66■□□□□ 0.42
CPSF1-210ENST00000532935 KPNA6O60684 536 aa17.66■□□□□ 0.42
CPSF1-210ENST00000532935 STAM2O75886 525 aa17.66■□□□□ 0.42
CPSF1-210ENST00000532935 NAPAP54920 295 aa17.66■□□□□ 0.42
CPSF1-210ENST00000532935 ANAPC15P60006 121 aa17.66■□□□□ 0.42
CPSF1-210ENST00000532935 PSMC6P62333 389 aa17.66■□□□□ 0.42
CPSF1-210ENST00000532935 AFG1LQ8WV93 481 aa17.66■□□□□ 0.42
CPSF1-210ENST00000532935 MTG1Q9BT17 334 aaPredicted RBP17.66■□□□□ 0.42
CPSF1-210ENST00000532935 SEZ6LQ9BYH1 1024 aa17.66■□□□□ 0.42
CPSF1-210ENST00000532935 UBE2OQ9C0C9 1292 aaKnown RBP17.66■□□□□ 0.42
CPSF1-210ENST00000532935 PDRG1Q9NUG6 133 aa17.66■□□□□ 0.42
CPSF1-210ENST00000532935 TMEM39AQ9NV64 488 aa17.66■□□□□ 0.42
CPSF1-210ENST00000532935 BARHL2Q9NY43 387 aa17.66■□□□□ 0.42
CPSF1-210ENST00000532935 LAMA2P24043 3122 aaKnown RBP17.65■□□□□ 0.42
CPSF1-210ENST00000532935 MMP3P08254 477 aa17.65■□□□□ 0.42
CPSF1-210ENST00000532935 TGFB3P10600 412 aa17.65■□□□□ 0.42
CPSF1-210ENST00000532935 CCT2P78371 535 aaKnown RBP17.65■□□□□ 0.42
CPSF1-210ENST00000532935 PFKFB3Q16875 520 aaPredicted RBP17.65■□□□□ 0.42
CPSF1-210ENST00000532935 GNPTABQ3T906 1256 aa17.65■□□□□ 0.42
CPSF1-210ENST00000532935 PCNX4Q63HM2 1172 aa17.65■□□□□ 0.42
CPSF1-210ENST00000532935 XRRA1Q6P2D8 792 aa17.65■□□□□ 0.42
CPSF1-210ENST00000532935 FAM126BQ8IXS8 530 aa17.65■□□□□ 0.42
CPSF1-210ENST00000532935 DHX37Q8IY37 1157 aaKnown RBP17.65■□□□□ 0.42
CPSF1-210ENST00000532935 EMID1Q96A84 441 aaPredicted RBP17.65■□□□□ 0.42
CPSF1-210ENST00000532935 LARP6Q9BRS8 491 aaKnown RBP17.65■□□□□ 0.42
CPSF1-210ENST00000532935 NCOA5Q9HCD5 579 aaKnown RBP17.65■□□□□ 0.42
CPSF1-210ENST00000532935 RIC8AQ9NPQ8 531 aa17.65■□□□□ 0.42
CPSF1-210ENST00000532935 SZT2Q5T011 3432 aa17.65■□□□□ 0.42
CPSF1-210ENST00000532935 SPDYE3A6NKU9 549 aa17.64■□□□□ 0.41
CPSF1-210ENST00000532935 TLR3O15455 904 aaKnown RBP17.64■□□□□ 0.41
CPSF1-210ENST00000532935 PRPF3O43395 683 aaKnown RBP17.64■□□□□ 0.41
CPSF1-210ENST00000532935 SEC24BO95487 1268 aa17.64■□□□□ 0.41
CPSF1-210ENST00000532935 SCG2P13521 617 aa17.64■□□□□ 0.41
CPSF1-210ENST00000532935 ADCY7P51828 1080 aa17.64■□□□□ 0.41
CPSF1-210ENST00000532935 SP2Q02086 613 aa17.64■□□□□ 0.41
CPSF1-210ENST00000532935 LAMC2Q13753 1193 aa17.64■□□□□ 0.41
CPSF1-210ENST00000532935 NTRK3Q16288 839 aa17.64■□□□□ 0.41
CPSF1-210ENST00000532935 TEX2Q8IWB9 1127 aa17.64■□□□□ 0.41
CPSF1-210ENST00000532935 BADQ92934 168 aa17.64■□□□□ 0.41
CPSF1-210ENST00000532935 PHKBQ93100 1093 aa17.64■□□□□ 0.41
CPSF1-210ENST00000532935 ZNF274Q96GC6 653 aaPredicted RBP17.64■□□□□ 0.41
CPSF1-210ENST00000532935 INPP4AQ96PE3 977 aaPredicted RBP17.64■□□□□ 0.41
CPSF1-210ENST00000532935 RTEL1Q9NZ71 1219 aa17.64■□□□□ 0.41
CPSF1-210ENST00000532935 TBX21Q9UL17 535 aa17.64■□□□□ 0.41
CPSF1-210ENST00000532935 PCDHA6Q9UN73 950 aa17.64■□□□□ 0.41
CPSF1-210ENST00000532935 PCDHA8Q9Y5H6 950 aa17.64■□□□□ 0.41
CPSF1-210ENST00000532935 SMCO2A6NFE2 343 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms