RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 RASIP1Q5U651 963 aa26.67■■□□□ 1.86
LTBP3-220ENST00000532661 FCHSD1Q86WN1 690 aa26.67■■□□□ 1.86
LTBP3-220ENST00000532661 SCLYQ96I15 445 aa26.67■■□□□ 1.86
LTBP3-220ENST00000532661 CDX2Q99626 313 aaPredicted RBP26.67■■□□□ 1.86
LTBP3-220ENST00000532661 BAZ2BQ9UIF8 2168 aaKnown RBP26.66■■□□□ 1.86
LTBP3-220ENST00000532661 PSRC1Q6PGN9 363 aaPredicted RBP26.66■■□□□ 1.86
LTBP3-220ENST00000532661 LRRC2Q9BYS8 371 aa26.66■■□□□ 1.86
LTBP3-220ENST00000532661 MRVI1Q9Y6F6 885 aa26.66■■□□□ 1.86
LTBP3-220ENST00000532661 DDAH1O94760 285 aa26.65■■□□□ 1.86
LTBP3-220ENST00000532661 SUPT20HL2P0C7V6 817 aa26.65■■□□□ 1.86
LTBP3-220ENST00000532661 RXRAP19793 462 aa26.65■■□□□ 1.86
LTBP3-220ENST00000532661 TRAF1Q13077 416 aa26.65■■□□□ 1.86
LTBP3-220ENST00000532661 PGM5Q15124 567 aa26.65■■□□□ 1.86
LTBP3-220ENST00000532661 NFRKBQ6P4R8 1299 aa26.65■■□□□ 1.86
LTBP3-220ENST00000532661 NFXL1Q6ZNB6 911 aa26.65■■□□□ 1.86
LTBP3-220ENST00000532661 VSIG10LQ86VR7 867 aa26.65■■□□□ 1.86
LTBP3-220ENST00000532661 SAMD3Q8N6K7 520 aa26.65■■□□□ 1.86
LTBP3-220ENST00000532661 CTCFLQ8NI51 663 aaPredicted RBP26.65■■□□□ 1.86
LTBP3-220ENST00000532661 VWCEQ96DN2 955 aa26.65■■□□□ 1.86
LTBP3-220ENST00000532661 MAP3K14Q99558 947 aa26.65■■□□□ 1.86
LTBP3-220ENST00000532661 MTA3Q9BTC8 594 aa26.65■■□□□ 1.86
LTBP3-220ENST00000532661 CXXC1Q9P0U4 656 aaPredicted RBP26.65■■□□□ 1.86
LTBP3-220ENST00000532661 SORBS3O60504 671 aa26.64■■□□□ 1.86
LTBP3-220ENST00000532661 PLEKHA8P1O95397 391 aa26.64■■□□□ 1.86
LTBP3-220ENST00000532661 FGBP02675 491 aa26.64■■□□□ 1.86
LTBP3-220ENST00000532661 DNAJB2P25686 324 aa26.64■■□□□ 1.86
LTBP3-220ENST00000532661 RAB11FIP4Q86YS3 637 aa26.64■■□□□ 1.86
LTBP3-220ENST00000532661 CMTR1Q8N1G2 835 aaKnown RBP26.64■■□□□ 1.86
LTBP3-220ENST00000532661 KAT2BQ92831 832 aa26.64■■□□□ 1.86
LTBP3-220ENST00000532661 TMEM87BQ96K49 555 aa26.64■■□□□ 1.86
LTBP3-220ENST00000532661 SCN10AQ9Y5Y9 1956 aa26.64■■□□□ 1.85
LTBP3-220ENST00000532661 CCDC69A6NI79 296 aa26.63■■□□□ 1.85
LTBP3-220ENST00000532661 PBX2P40425 430 aa26.63■■□□□ 1.85
LTBP3-220ENST00000532661 OTOP2Q7RTS6 562 aa26.63■■□□□ 1.85
LTBP3-220ENST00000532661 SRBD1Q8N5C6 995 aaKnown RBP26.63■■□□□ 1.85
LTBP3-220ENST00000532661 MYLIPQ8WY64 445 aa26.63■■□□□ 1.85
LTBP3-220ENST00000532661 HERVK_113Q902F9 699 aa26.63■■□□□ 1.85
LTBP3-220ENST00000532661 SPZ1Q9BXG8 430 aa26.63■■□□□ 1.85
LTBP3-220ENST00000532661 KIF5BP33176 963 aa26.62■■□□□ 1.85
LTBP3-220ENST00000532661 DHX37Q8IY37 1157 aaKnown RBP26.62■■□□□ 1.85
LTBP3-220ENST00000532661 TMTC2Q8N394 836 aa26.62■■□□□ 1.85
LTBP3-220ENST00000532661 GPKOWQ92917 476 aaPredicted RBP eCLIP26.62■■□□□ 1.85
LTBP3-220ENST00000532661 RRP36Q96EU6 259 aaKnown RBP26.62■■□□□ 1.85
LTBP3-220ENST00000532661 A0A0C4DFX4 3053 aa26.62■■□□□ 1.85
LTBP3-220ENST00000532661 CASTP20810 708 aaKnown RBP26.61■■□□□ 1.85
LTBP3-220ENST00000532661 SP2Q02086 613 aa26.61■■□□□ 1.85
LTBP3-220ENST00000532661 PTPN11Q06124 597 aaPredicted RBP26.61■■□□□ 1.85
LTBP3-220ENST00000532661 LAMC2Q13753 1193 aa26.61■■□□□ 1.85
LTBP3-220ENST00000532661 EMID1Q96A84 441 aaPredicted RBP26.61■■□□□ 1.85
LTBP3-220ENST00000532661 CCND2P30279 289 aa26.6■■□□□ 1.85
LTBP3-220ENST00000532661 LIFRP42702 1097 aa26.6■■□□□ 1.85
LTBP3-220ENST00000532661 DGKDQ16760 1214 aa26.6■■□□□ 1.85
LTBP3-220ENST00000532661 PBX4Q9BYU1 374 aa26.6■■□□□ 1.85
LTBP3-220ENST00000532661 KIAA1217Q5T5P2 1943 aa26.6■■□□□ 1.85
LTBP3-220ENST00000532661 TMEM265A0A087WTH1 108 aa26.59■■□□□ 1.85
LTBP3-220ENST00000532661 SMARCA1P28370 1054 aa26.59■■□□□ 1.85
LTBP3-220ENST00000532661 MYSM1Q5VVJ2 828 aa26.59■■□□□ 1.85
LTBP3-220ENST00000532661 GDF6Q6KF10 455 aaPredicted RBP26.59■■□□□ 1.85
LTBP3-220ENST00000532661 DEFB128Q7Z7B8 93 aa26.59■■□□□ 1.85
LTBP3-220ENST00000532661 RPUSD2Q8IZ73 545 aaKnown RBP26.59■■□□□ 1.85
LTBP3-220ENST00000532661 PPTC7Q8NI37 304 aa26.59■■□□□ 1.85
LTBP3-220ENST00000532661 TIFAQ96CG3 184 aa26.59■■□□□ 1.85
LTBP3-220ENST00000532661 LZTS2Q9BRK4 669 aa26.59■■□□□ 1.85
LTBP3-220ENST00000532661 hCG_1642624A0A1W2PR95 340 aa26.58■■□□□ 1.85
LTBP3-220ENST00000532661 GGPS1O95749 300 aa26.58■■□□□ 1.85
LTBP3-220ENST00000532661 ZNF286BP0CG31 522 aa26.58■■□□□ 1.85
LTBP3-220ENST00000532661 GNAQP50148 359 aa26.58■■□□□ 1.85
LTBP3-220ENST00000532661 MRPS9P82933 396 aaKnown RBP26.58■■□□□ 1.85
LTBP3-220ENST00000532661 GRIN2CQ14957 1233 aa26.58■■□□□ 1.85
LTBP3-220ENST00000532661 PTGISQ16647 500 aa26.58■■□□□ 1.85
LTBP3-220ENST00000532661 CELF3Q5SZQ8 465 aaKnown RBP26.58■■□□□ 1.85
LTBP3-220ENST00000532661 USP17L6PQ6QN14 398 aa26.58■■□□□ 1.85
LTBP3-220ENST00000532661 CTAGE1Q96RT6 745 aa26.58■■□□□ 1.85
LTBP3-220ENST00000532661 ALG1Q9BT22 464 aa26.58■■□□□ 1.85
LTBP3-220ENST00000532661 BCAS3Q9H6U6 928 aa26.58■■□□□ 1.85
LTBP3-220ENST00000532661 NOD1Q9Y239 953 aa26.58■■□□□ 1.85
LTBP3-220ENST00000532661 SLC12A7Q9Y666 1083 aa26.58■■□□□ 1.85
LTBP3-220ENST00000532661 CDH23Q9H251 3354 aa26.57■■□□□ 1.84
LTBP3-220ENST00000532661 CDC45O75419 566 aa26.57■■□□□ 1.84
LTBP3-220ENST00000532661 UBA1P22314 1058 aaKnown RBP26.57■■□□□ 1.84
LTBP3-220ENST00000532661 PSEN2P49810 448 aa26.57■■□□□ 1.84
LTBP3-220ENST00000532661 HSDL1Q3SXM5 330 aa26.57■■□□□ 1.84
LTBP3-220ENST00000532661 KCNV1Q6PIU1 500 aa26.57■■□□□ 1.84
LTBP3-220ENST00000532661 RASEFQ8IZ41 740 aa26.57■■□□□ 1.84
LTBP3-220ENST00000532661 CCDC82Q8N4S0 544 aa26.57■■□□□ 1.84
LTBP3-220ENST00000532661 TCEANC2Q96MN5 208 aa26.57■■□□□ 1.84
LTBP3-220ENST00000532661 SPATA33Q96N06 139 aa26.57■■□□□ 1.84
LTBP3-220ENST00000532661 ZNF576Q9H609 170 aa26.57■■□□□ 1.84
LTBP3-220ENST00000532661 SEC63Q9UGP8 760 aaKnown RBP26.57■■□□□ 1.84
LTBP3-220ENST00000532661 EYSQ5T1H1 3165 aa26.56■■□□□ 1.84
LTBP3-220ENST00000532661 MEIS2O14770 477 aa26.56■■□□□ 1.84
LTBP3-220ENST00000532661 IQCF3P0C7M6 154 aa26.56■■□□□ 1.84
LTBP3-220ENST00000532661 CALM1P0DP23 149 aa26.56■■□□□ 1.84
LTBP3-220ENST00000532661 CALM2P0DP24 149 aa26.56■■□□□ 1.84
LTBP3-220ENST00000532661 CALM3P0DP25 149 aa26.56■■□□□ 1.84
LTBP3-220ENST00000532661 RNF20Q5VTR2 975 aa26.56■■□□□ 1.84
LTBP3-220ENST00000532661 SESTD1Q86VW0 696 aa26.56■■□□□ 1.84
LTBP3-220ENST00000532661 FANCBQ8NB91 859 aa26.56■■□□□ 1.84
LTBP3-220ENST00000532661 RETREG2Q8NC44 543 aa26.56■■□□□ 1.84
LTBP3-220ENST00000532661 NEK1Q96PY6 1258 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms