RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 KRTAP9-9Q9BYP9 154 aa5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 KRTAP9-4Q9BYQ2 154 aa5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 FAM86C1Q9NVL1 165 aa5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 C14orf119Q9NWQ9 140 aa5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 THG1LQ9NWX6 298 aaKnown RBP5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 DDX20Q9UHI6 824 aaKnown RBP5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 INVSQ9Y283 1065 aa5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 SF3B6Q9Y3B4 125 aaKnown RBP5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 PCDHB12Q9Y5F1 795 aa5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 NPFFR2Q9Y5X5 522 aa5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 SCO2A0A1W2PP80 73 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 hCG_1642624A0A1W2PR95 340 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 BLACEA4D250 179 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 F5H423 210 aaPredicted RBP5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 DDX3YO15523 660 aaKnown RBP5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 NBNO60934 754 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 AOC2O75106 756 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 SRGNP10124 158 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 ITIH2P19823 946 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 COPB2P35606 906 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 RENBPP51606 427 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 MECP2P51608 486 aaKnown RBP5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 GTF2A2P52657 109 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 GEMIN4P57678 1058 aaKnown RBP5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 AMPD2Q01433 879 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 TBC1D8BQ0IIM8 1120 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 PAK1Q13153 545 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 LRRC32Q14392 662 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 DDB1Q16531 1140 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 DBN1Q16643 649 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 TMEM177Q53S58 311 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 ATAT1Q5SQI0 421 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 MZT2AQ6P582 158 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 CDC37L1Q7L3B6 337 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 RASSF3Q86WH2 238 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 MAP4K3Q8IVH8 894 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 ZC3H7AQ8IWR0 971 aaKnown RBP5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 CCDC89Q8N998 374 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 VPS37AQ8NEZ2 397 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 IL17REQ8NFR9 667 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 BAHD1Q8TBE0 780 aaPredicted RBP5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 CHTF18Q8WVB6 975 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 FBXL18Q96ME1 805 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 ALG1Q9BT22 464 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 WDR18Q9BV38 432 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 NAA15Q9BXJ9 866 aaKnown RBP5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 ASPNQ9BXN1 380 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 SPTLC3Q9NUV7 552 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 C9orf78Q9NZ63 289 aaPredicted RBP5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 TRAF6Q9Y4K3 522 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 ASXL2Q76L83 1435 aa5.29□□□□□ -1.56
AC055878.1-201ENST00000531858 A0A0U1RQG5 324 aaPredicted RBP5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 TPP1O14773 563 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 ECEL1O95672 775 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 CKMP06732 381 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 SLC5A1P13866 664 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 ATP2A2P16615 1042 aaKnown RBP5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 MX2P20592 715 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 COL8A1P27658 744 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 NTF4P34130 210 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 ADH7P40394 386 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 GRK6P43250 576 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 ADKP55263 362 aaKnown RBP5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 ZNF445P59923 1031 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 DDX10Q13206 875 aaKnown RBP5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 IFIT5Q13325 482 aaKnown RBP5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 ODF1Q14990 250 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 NBPF9Q3BBW0 867 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 PPM1JQ5JR12 505 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 JAKMIP3Q5VZ66 844 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 E4F1Q66K89 784 aaPredicted RBP5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 GDF6Q6KF10 455 aaPredicted RBP5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 XRRA1Q6P2D8 792 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 DPP9Q86TI2 863 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 FAM9BQ8IZU0 186 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 MFSD2AQ8NA29 543 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 DEPTORQ8TB45 409 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 DIO2Q92813 273 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 VWCEQ96DN2 955 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 WDR89Q96FK6 387 aaPredicted RBP5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 CDK5RAP3Q96JB5 506 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 SGCZQ96LD1 299 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 LRGUKQ96M69 825 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 LGR4Q9BXB1 951 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 TMEM60Q9H2L4 133 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 ATXN3LQ9H3M9 355 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 SEMA6BQ9H3T3 888 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 VTA1Q9NP79 307 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 NAGPAQ9UK23 515 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 DNM3Q9UQ16 869 aa5.28□□□□□ -1.56
AC055878.1-201ENST00000531858 KRTAP4-8A0A0G2JLE6 195 aa5.27□□□□□ -1.57
AC055878.1-201ENST00000531858 WDR64B1ANS9 1081 aa5.27□□□□□ -1.57
AC055878.1-201ENST00000531858 FAM227AF5H4B4 570 aa5.27□□□□□ -1.57
AC055878.1-201ENST00000531858 FSCN2O14926 492 aa5.27□□□□□ -1.57
AC055878.1-201ENST00000531858 XPOTO43592 962 aaKnown RBP5.27□□□□□ -1.57
AC055878.1-201ENST00000531858 AP1G1O43747 822 aa5.27□□□□□ -1.57
AC055878.1-201ENST00000531858 PCDHGA12O60330 932 aa5.27□□□□□ -1.57
AC055878.1-201ENST00000531858 TLR5O60602 858 aa5.27□□□□□ -1.57
AC055878.1-201ENST00000531858 RNASEH2AO75792 299 aaKnown RBP5.27□□□□□ -1.57
AC055878.1-201ENST00000531858 RGS9O75916 674 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms