RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 TTI2Q6NXR4 508 aa12.51□□□□□ -0.41
NXF1-211ENST00000531709 DPP8Q6V1X1 898 aaPredicted RBP12.51□□□□□ -0.41
NXF1-211ENST00000531709 MICALCLQ6ZW33 695 aa12.51□□□□□ -0.41
NXF1-211ENST00000531709 CNBD1Q8NA66 436 aa12.51□□□□□ -0.41
NXF1-211ENST00000531709 HDAC7Q8WUI4 952 aa12.51□□□□□ -0.41
NXF1-211ENST00000531709 DNAJC7Q99615 494 aa12.51□□□□□ -0.41
NXF1-211ENST00000531709 PSD3Q9NYI0 1048 aa12.51□□□□□ -0.41
NXF1-211ENST00000531709 DDX25Q9UHL0 483 aaKnown RBP12.51□□□□□ -0.41
NXF1-211ENST00000531709 RCCD1A6NED2 376 aa12.51□□□□□ -0.41
NXF1-211ENST00000531709 SLC1A4P43007 532 aa12.51□□□□□ -0.41
NXF1-211ENST00000531709 FKBP3Q00688 224 aaKnown RBP12.51□□□□□ -0.41
NXF1-211ENST00000531709 LRRC31Q6UY01 552 aa12.51□□□□□ -0.41
NXF1-211ENST00000531709 PROCA1Q8NCQ7 364 aaPredicted RBP12.51□□□□□ -0.41
NXF1-211ENST00000531709 CEP95Q96GE4 821 aa12.51□□□□□ -0.41
NXF1-211ENST00000531709 REXO2Q9Y3B8 237 aaKnown RBP12.51□□□□□ -0.41
NXF1-211ENST00000531709 PCDHB13Q9Y5F0 798 aa12.51□□□□□ -0.41
NXF1-211ENST00000531709 ANO9A1A5B4 782 aa12.5□□□□□ -0.41
NXF1-211ENST00000531709 E7EVH7 732 aa12.5□□□□□ -0.41
NXF1-211ENST00000531709 NNTQ13423 1086 aa12.5□□□□□ -0.41
NXF1-211ENST00000531709 NAA35Q5VZE5 725 aa12.5□□□□□ -0.41
NXF1-211ENST00000531709 CLEC10AQ8IUN9 316 aa12.5□□□□□ -0.41
NXF1-211ENST00000531709 GOLGA8KD6RF30 607 aa12.5□□□□□ -0.41
NXF1-211ENST00000531709 PALMO75781 387 aa12.5□□□□□ -0.41
NXF1-211ENST00000531709 PLCG2P16885 1265 aa12.5□□□□□ -0.41
NXF1-211ENST00000531709 ZFYVE27Q5T4F4 411 aa12.5□□□□□ -0.41
NXF1-211ENST00000531709 WDR93Q6P2C0 686 aa12.5□□□□□ -0.41
NXF1-211ENST00000531709 MAGEF1Q9HAY2 307 aa12.5□□□□□ -0.41
NXF1-211ENST00000531709 CCNL1Q9UK58 526 aaPredicted RBP12.5□□□□□ -0.41
NXF1-211ENST00000531709 CAPN7Q9Y6W3 813 aa12.5□□□□□ -0.41
NXF1-211ENST00000531709 C5P01031 1676 aa12.5□□□□□ -0.41
NXF1-211ENST00000531709 CRYBG1Q9Y4K1 1723 aa12.5□□□□□ -0.41
NXF1-211ENST00000531709 GTF2IP78347 998 aa12.5□□□□□ -0.41
NXF1-211ENST00000531709 WDR59Q6PJI9 974 aa12.5□□□□□ -0.41
NXF1-211ENST00000531709 KCTD1Q719H9 257 aa12.5□□□□□ -0.41
NXF1-211ENST00000531709 IRF2BP1Q8IU81 584 aa12.5□□□□□ -0.41
NXF1-211ENST00000531709 TCEAL9Q9UHQ7 104 aa12.5□□□□□ -0.41
NXF1-211ENST00000531709 COL5A2P05997 1499 aaPredicted RBP12.5□□□□□ -0.41
NXF1-211ENST00000531709 CAMTA1Q9Y6Y1 1673 aa12.5□□□□□ -0.41
NXF1-211ENST00000531709 PDE2AO00408 941 aaPredicted RBP12.49□□□□□ -0.41
NXF1-211ENST00000531709 KRT14P02533 472 aa12.49□□□□□ -0.41
NXF1-211ENST00000531709 CYP4A11Q02928 519 aa12.49□□□□□ -0.41
NXF1-211ENST00000531709 IFI16Q16666 785 aaKnown RBP12.49□□□□□ -0.41
NXF1-211ENST00000531709 USH1GQ495M9 461 aa12.49□□□□□ -0.41
NXF1-211ENST00000531709 PSTPIP2Q9H939 334 aa12.49□□□□□ -0.41
NXF1-211ENST00000531709 COL4A3BPQ9Y5P4 624 aa12.49□□□□□ -0.41
NXF1-211ENST00000531709 RGPD5Q99666 1765 aa12.49□□□□□ -0.41
NXF1-211ENST00000531709 MYMKA6NI61 221 aa12.49□□□□□ -0.41
NXF1-211ENST00000531709 TMEM110-MUSTN1A8MSY1 372 aa12.49□□□□□ -0.41
NXF1-211ENST00000531709 STXBP3O00186 592 aa12.49□□□□□ -0.41
NXF1-211ENST00000531709 MEIS1O00470 390 aa12.49□□□□□ -0.41
NXF1-211ENST00000531709 ABCB4P21439 1286 aa12.49□□□□□ -0.41
NXF1-211ENST00000531709 MAGEA9P43362 315 aa12.49□□□□□ -0.41
NXF1-211ENST00000531709 TCP10Q12799 353 aa12.49□□□□□ -0.41
NXF1-211ENST00000531709 NAALADL2Q58DX5 795 aa12.49□□□□□ -0.41
NXF1-211ENST00000531709 C8orf37Q96NL8 207 aa12.49□□□□□ -0.41
NXF1-211ENST00000531709 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.49□□□□□ -0.414e-6■■■■■ 63.2
NXF1-211ENST00000531709 IL17RBQ9NRM6 502 aa12.49□□□□□ -0.41
NXF1-211ENST00000531709 MAD2L2Q9UI95 211 aa12.49□□□□□ -0.41
NXF1-211ENST00000531709 CHMP2AO43633 222 aa12.49□□□□□ -0.41
NXF1-211ENST00000531709 MYBL2P10244 700 aa12.49□□□□□ -0.41
NXF1-211ENST00000531709 KRT13P13646 458 aa12.49□□□□□ -0.41
NXF1-211ENST00000531709 PEX26Q7Z412 305 aa12.49□□□□□ -0.41
NXF1-211ENST00000531709 AP1M1Q9BXS5 423 aa12.49□□□□□ -0.41
NXF1-211ENST00000531709 KBTBD4Q9NVX7 518 aa12.49□□□□□ -0.41
NXF1-211ENST00000531709 ATRNO75882 1429 aa12.49□□□□□ -0.41
NXF1-211ENST00000531709 HLA-DOAP06340 250 aa12.48□□□□□ -0.41
NXF1-211ENST00000531709 UNC13DQ70J99 1090 aa12.48□□□□□ -0.41
NXF1-211ENST00000531709 DPH5Q9H2P9 285 aa12.48□□□□□ -0.41
NXF1-211ENST00000531709 E9PMD0 336 aa12.48□□□□□ -0.41
NXF1-211ENST00000531709 PABPC4Q13310 644 aaKnown RBP eCLIP12.48□□□□□ -0.41
NXF1-211ENST00000531709 KCTD19Q17RG1 926 aaPredicted RBP12.48□□□□□ -0.41
NXF1-211ENST00000531709 FBXO33Q7Z6M2 555 aa12.48□□□□□ -0.41
NXF1-211ENST00000531709 SYCP3Q8IZU3 236 aa12.48□□□□□ -0.41
NXF1-211ENST00000531709 RDH13Q8NBN7 331 aa12.48□□□□□ -0.41
NXF1-211ENST00000531709 ERMNQ8TAM6 284 aa12.48□□□□□ -0.41
NXF1-211ENST00000531709 CUL5Q93034 780 aa12.48□□□□□ -0.41
NXF1-211ENST00000531709 DUSP9Q99956 384 aaKnown RBP12.48□□□□□ -0.41
NXF1-211ENST00000531709 RBM12Q9NTZ6 932 aaKnown RBP12.48□□□□□ -0.41
NXF1-211ENST00000531709 GGA1Q9UJY5 639 aa12.48□□□□□ -0.41
NXF1-211ENST00000531709 ABCC6O95255 1503 aa12.48□□□□□ -0.41
NXF1-211ENST00000531709 NR2F2P24468 414 aa12.48□□□□□ -0.41
NXF1-211ENST00000531709 CTNNA1P35221 906 aaKnown RBP12.48□□□□□ -0.41
NXF1-211ENST00000531709 SCNN1DP51172 638 aa12.48□□□□□ -0.41
NXF1-211ENST00000531709 FAM83BQ5T0W9 1011 aa12.48□□□□□ -0.41
NXF1-211ENST00000531709 PAPD7Q5XG87 772 aaKnown RBP12.48□□□□□ -0.41
NXF1-211ENST00000531709 TMED8Q6PL24 325 aaPredicted RBP12.48□□□□□ -0.41
NXF1-211ENST00000531709 CLEC4GQ6UXB4 293 aa12.48□□□□□ -0.41
NXF1-211ENST00000531709 B4GALNT4Q76KP1 1039 aa12.48□□□□□ -0.41
NXF1-211ENST00000531709 CPLX4Q7Z7G2 160 aa12.48□□□□□ -0.41
NXF1-211ENST00000531709 EHD4Q9H223 541 aa12.48□□□□□ -0.41
NXF1-211ENST00000531709 ARHGAP20Q9P2F6 1191 aa12.48□□□□□ -0.41
NXF1-211ENST00000531709 FAM169AQ9Y6X4 670 aa12.48□□□□□ -0.41
NXF1-211ENST00000531709 TARSL2A2RTX5 802 aaKnown RBP12.47□□□□□ -0.41
NXF1-211ENST00000531709 SPDYE3A6NKU9 549 aa12.47□□□□□ -0.41
NXF1-211ENST00000531709 GCOM1H8Y6P7 765 aaPredicted RBP12.47□□□□□ -0.41
NXF1-211ENST00000531709 MYZAPP0CAP1 466 aa12.47□□□□□ -0.41
NXF1-211ENST00000531709 PRR16Q569H4 304 aa12.47□□□□□ -0.41
NXF1-211ENST00000531709 RCSD1Q6JBY9 416 aa12.47□□□□□ -0.41
NXF1-211ENST00000531709 AEBP2Q6ZN18 517 aaPredicted RBP12.47□□□□□ -0.41
NXF1-211ENST00000531709 GOLPH3Q9H4A6 298 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms