RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 PSMC6P62333 389 aa14.49□□□□□ -0.09
C11orf54-210ENST00000531516 PGM5Q15124 567 aa14.49□□□□□ -0.09
C11orf54-210ENST00000531516 LY6KQ17RY6 165 aa14.49□□□□□ -0.09
C11orf54-210ENST00000531516 ZNF697Q5TEC3 545 aa14.49□□□□□ -0.09
C11orf54-210ENST00000531516 XRRA1Q6P2D8 792 aa14.49□□□□□ -0.09
C11orf54-210ENST00000531516 CCDC62Q6P9F0 684 aa14.49□□□□□ -0.09
C11orf54-210ENST00000531516 VSIG10LQ86VR7 867 aa14.49□□□□□ -0.09
C11orf54-210ENST00000531516 CCDC155Q8N6L0 562 aa14.49□□□□□ -0.09
C11orf54-210ENST00000531516 RETREG2Q8NC44 543 aa14.49□□□□□ -0.09
C11orf54-210ENST00000531516 AFG1LQ8WV93 481 aa14.49□□□□□ -0.09
C11orf54-210ENST00000531516 COPS5Q92905 334 aa14.49□□□□□ -0.09
C11orf54-210ENST00000531516 ALDH8A1Q9H2A2 487 aaPredicted RBP14.49□□□□□ -0.09
C11orf54-210ENST00000531516 MLXIPQ9HAP2 919 aa14.49□□□□□ -0.09
C11orf54-210ENST00000531516 RANBP2P49792 3224 aaKnown RBP14.48□□□□□ -0.09
C11orf54-210ENST00000531516 SPDYE3A6NKU9 549 aa14.48□□□□□ -0.09
C11orf54-210ENST00000531516 B4GALT4O60513 344 aa14.48□□□□□ -0.09
C11orf54-210ENST00000531516 CD4P01730 458 aa14.48□□□□□ -0.09
C11orf54-210ENST00000531516 SMAD3P84022 425 aaKnown RBP14.48□□□□□ -0.09
C11orf54-210ENST00000531516 BFSP2Q13515 415 aa14.48□□□□□ -0.09
C11orf54-210ENST00000531516 RTN1Q16799 776 aa14.48□□□□□ -0.09
C11orf54-210ENST00000531516 NBPF20Q3BBV1 942 aa14.48□□□□□ -0.09
C11orf54-210ENST00000531516 TMEM63BQ5T3F8 832 aa14.48□□□□□ -0.09
C11orf54-210ENST00000531516 FAM109BQ6ICB4 259 aaPredicted RBP14.48□□□□□ -0.09
C11orf54-210ENST00000531516 NLRX1Q86UT6 975 aa14.48□□□□□ -0.09
C11orf54-210ENST00000531516 SKAP1Q86WV1 359 aa14.48□□□□□ -0.09
C11orf54-210ENST00000531516 LRRC2Q9BYS8 371 aa14.48□□□□□ -0.09
C11orf54-210ENST00000531516 TRPV6Q9H1D0 765 aa14.48□□□□□ -0.09
C11orf54-210ENST00000531516 PSTPIP2Q9H939 334 aa14.48□□□□□ -0.09
C11orf54-210ENST00000531516 DDX41Q9UJV9 622 aaKnown RBP14.48□□□□□ -0.09
C11orf54-210ENST00000531516 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.47□□□□□ -0.09
C11orf54-210ENST00000531516 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.47□□□□□ -0.09
C11orf54-210ENST00000531516 PIK3CDO00329 1044 aa14.47□□□□□ -0.09
C11orf54-210ENST00000531516 NOP56O00567 594 aaKnown RBP14.47□□□□□ -0.09
C11orf54-210ENST00000531516 OPLAHO14841 1288 aa14.47□□□□□ -0.09
C11orf54-210ENST00000531516 EIF5BO60841 1220 aaKnown RBP14.47□□□□□ -0.09
C11orf54-210ENST00000531516 ARIH2O95376 493 aa14.47□□□□□ -0.09
C11orf54-210ENST00000531516 PLEKHA8P1O95397 391 aa14.47□□□□□ -0.09
C11orf54-210ENST00000531516 MMP3P08254 477 aa14.47□□□□□ -0.09
C11orf54-210ENST00000531516 RXRAP19793 462 aa14.47□□□□□ -0.09
C11orf54-210ENST00000531516 ITGB8P26012 769 aa14.47□□□□□ -0.09
C11orf54-210ENST00000531516 RCAN1P53805 252 aa14.47□□□□□ -0.09
C11orf54-210ENST00000531516 NEDD9Q14511 834 aa14.47□□□□□ -0.09
C11orf54-210ENST00000531516 C9orf50Q5SZB4 431 aa14.47□□□□□ -0.09
C11orf54-210ENST00000531516 BLOC1S2Q6QNY1 142 aa14.47□□□□□ -0.09
C11orf54-210ENST00000531516 TMTC3Q6ZXV5 915 aa14.47□□□□□ -0.09
C11orf54-210ENST00000531516 HEATR3Q7Z4Q2 680 aa14.47□□□□□ -0.09
C11orf54-210ENST00000531516 TEX2Q8IWB9 1127 aa14.47□□□□□ -0.09
C11orf54-210ENST00000531516 CCDC82Q8N4S0 544 aa14.47□□□□□ -0.09
C11orf54-210ENST00000531516 SRBD1Q8N5C6 995 aaKnown RBP14.47□□□□□ -0.09
C11orf54-210ENST00000531516 C7orf31Q8N865 590 aa14.47□□□□□ -0.09
C11orf54-210ENST00000531516 PPTC7Q8NI37 304 aa14.47□□□□□ -0.09
C11orf54-210ENST00000531516 EMID1Q96A84 441 aaPredicted RBP14.47□□□□□ -0.09
C11orf54-210ENST00000531516 CDHR1Q96JP9 859 aa14.47□□□□□ -0.09
C11orf54-210ENST00000531516 SPATA33Q96N06 139 aa14.47□□□□□ -0.09
C11orf54-210ENST00000531516 GLT8D2Q9H1C3 349 aa14.47□□□□□ -0.09
C11orf54-210ENST00000531516 GOLGA8AA7E2F4 631 aa14.46□□□□□ -0.09
C11orf54-210ENST00000531516 GOLGA8BA8MQT2 603 aa14.46□□□□□ -0.09
C11orf54-210ENST00000531516 EPB41L2O43491 1005 aaKnown RBP14.46□□□□□ -0.09
C11orf54-210ENST00000531516 PPFIA4O75335 1185 aa14.46□□□□□ -0.09
C11orf54-210ENST00000531516 FGBP02675 491 aa14.46□□□□□ -0.09
C11orf54-210ENST00000531516 PFKMP08237 780 aa14.46□□□□□ -0.09
C11orf54-210ENST00000531516 CSF2RAP15509 400 aa14.46□□□□□ -0.09
C11orf54-210ENST00000531516 PTGS1P23219 599 aa14.46□□□□□ -0.09
C11orf54-210ENST00000531516 CYP2C18P33260 490 aa14.46□□□□□ -0.09
C11orf54-210ENST00000531516 ARHGAP1Q07960 439 aa14.46□□□□□ -0.09
C11orf54-210ENST00000531516 APOA5Q6Q788 366 aa14.46□□□□□ -0.09
C11orf54-210ENST00000531516 GIMAP8Q8ND71 665 aaPredicted RBP14.46□□□□□ -0.09
C11orf54-210ENST00000531516 JAKMIP1Q96N16 626 aaKnown RBP14.46□□□□□ -0.09
C11orf54-210ENST00000531516 IL23AQ9NPF7 189 aa14.46□□□□□ -0.09
C11orf54-210ENST00000531516 PPP4R2Q9NY27 417 aa14.46□□□□□ -0.09
C11orf54-210ENST00000531516 GRIN2DO15399 1336 aa14.45□□□□□ -0.1
C11orf54-210ENST00000531516 KLF18A0A0U1RQI7 1052 aa14.45□□□□□ -0.1
C11orf54-210ENST00000531516 hCG_1984214I3L0E3 225 aa14.45□□□□□ -0.1
C11orf54-210ENST00000531516 FIBPO43427 364 aa14.45□□□□□ -0.1
C11orf54-210ENST00000531516 GGPS1O95749 300 aa14.45□□□□□ -0.1
C11orf54-210ENST00000531516 ACTN1P12814 892 aa14.45□□□□□ -0.1
C11orf54-210ENST00000531516 CCL23P55773 120 aa14.45□□□□□ -0.1
C11orf54-210ENST00000531516 EXOSC10Q01780 885 aaKnown RBP14.45□□□□□ -0.1
C11orf54-210ENST00000531516 AKAP17AQ02040 695 aaKnown RBP14.45□□□□□ -0.1
C11orf54-210ENST00000531516 SLC35G1Q2M3R5 365 aa14.45□□□□□ -0.1
C11orf54-210ENST00000531516 CELF3Q5SZQ8 465 aaKnown RBP14.45□□□□□ -0.1
C11orf54-210ENST00000531516 RAB11FIP4Q86YS3 637 aa14.45□□□□□ -0.1
C11orf54-210ENST00000531516 CMTR1Q8N1G2 835 aaKnown RBP14.45□□□□□ -0.1
C11orf54-210ENST00000531516 ZNF713Q8N859 430 aaPredicted RBP14.45□□□□□ -0.1
C11orf54-210ENST00000531516 NOC4LQ9BVI4 516 aaKnown RBP14.45□□□□□ -0.1
C11orf54-210ENST00000531516 TRMT13Q9NUP7 481 aaKnown RBP14.45□□□□□ -0.1
C11orf54-210ENST00000531516 MCM3APO60318 1980 aa14.44□□□□□ -0.1
C11orf54-210ENST00000531516 TMEM265A0A087WTH1 108 aa14.44□□□□□ -0.1
C11orf54-210ENST00000531516 HSPA4P34932 840 aa14.44□□□□□ -0.1
C11orf54-210ENST00000531516 RFC2P35250 354 aa14.44□□□□□ -0.1
C11orf54-210ENST00000531516 METAP2P50579 478 aaKnown RBP eCLIP14.44□□□□□ -0.1
C11orf54-210ENST00000531516 NAPAP54920 295 aa14.44□□□□□ -0.1
C11orf54-210ENST00000531516 PTGISQ16647 500 aa14.44□□□□□ -0.1
C11orf54-210ENST00000531516 PCNX4Q63HM2 1172 aa14.44□□□□□ -0.1
C11orf54-210ENST00000531516 PPP1R18Q6NYC8 613 aa14.44□□□□□ -0.1
C11orf54-210ENST00000531516 USP17L6PQ6QN14 398 aa14.44□□□□□ -0.1
C11orf54-210ENST00000531516 RASEFQ8IZ41 740 aa14.44□□□□□ -0.1
C11orf54-210ENST00000531516 CAGE1Q8TC20 777 aa14.44□□□□□ -0.1
C11orf54-210ENST00000531516 CCDC12Q8WUD4 166 aaPredicted RBP14.44□□□□□ -0.1
C11orf54-210ENST00000531516 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.44□□□□□ -0.17e-6■■□□□ 11.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms