RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 VGLL4Q14135 290 aa12.28□□□□□ -0.44
SRPRA-205ENST00000531104 KRT79Q5XKE5 535 aa12.28□□□□□ -0.44
SRPRA-205ENST00000531104 DLK2Q6UY11 383 aa12.28□□□□□ -0.44
SRPRA-205ENST00000531104 MCF2L2Q86YR7 1114 aa12.28□□□□□ -0.44
SRPRA-205ENST00000531104 RBM46Q8TBY0 533 aaKnown RBP12.28□□□□□ -0.44
SRPRA-205ENST00000531104 MAF1Q9H063 256 aa12.28□□□□□ -0.44
SRPRA-205ENST00000531104 BLZF1Q9H2G9 400 aa12.28□□□□□ -0.44
SRPRA-205ENST00000531104 RMND1Q9NWS8 449 aa12.28□□□□□ -0.44
SRPRA-205ENST00000531104 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.28□□□□□ -0.44
SRPRA-205ENST00000531104 RABGAP1Q9Y3P9 1069 aa12.28□□□□□ -0.44
SRPRA-205ENST00000531104 LOC285556D6RIA3 1793 aa12.28□□□□□ -0.44
SRPRA-205ENST00000531104 NFIBO00712 420 aa12.27□□□□□ -0.45
SRPRA-205ENST00000531104 GRIN3BO60391 1043 aa12.27□□□□□ -0.45
SRPRA-205ENST00000531104 RHOBTB3O94955 611 aa12.27□□□□□ -0.45
SRPRA-205ENST00000531104 ZNF18P17022 549 aa12.27□□□□□ -0.45
SRPRA-205ENST00000531104 HMGCS2P54868 508 aa12.27□□□□□ -0.45
SRPRA-205ENST00000531104 TPM4P67936 248 aa12.27□□□□□ -0.45
SRPRA-205ENST00000531104 COG2Q14746 738 aa12.27□□□□□ -0.45
SRPRA-205ENST00000531104 ECM1Q16610 540 aa12.27□□□□□ -0.45
SRPRA-205ENST00000531104 COBLL1Q53SF7 1204 aa12.27□□□□□ -0.45
SRPRA-205ENST00000531104 PRR16Q569H4 304 aa12.27□□□□□ -0.45
SRPRA-205ENST00000531104 MUM1L1Q5H9M0 696 aa12.27□□□□□ -0.45
SRPRA-205ENST00000531104 ZNF658Q5TYW1 1059 aaPredicted RBP12.27□□□□□ -0.45
SRPRA-205ENST00000531104 KRT26Q7Z3Y9 468 aa12.27□□□□□ -0.45
SRPRA-205ENST00000531104 FCHSD1Q86WN1 690 aa12.27□□□□□ -0.45
SRPRA-205ENST00000531104 SNX29Q8TEQ0 813 aa12.27□□□□□ -0.45
SRPRA-205ENST00000531104 RAD54LQ92698 747 aa12.27□□□□□ -0.45
SRPRA-205ENST00000531104 GJA10Q969M2 543 aa12.27□□□□□ -0.45
SRPRA-205ENST00000531104 ATG4CQ96DT6 458 aa12.27□□□□□ -0.45
SRPRA-205ENST00000531104 CDCA5Q96FF9 252 aa12.27□□□□□ -0.45
SRPRA-205ENST00000531104 PLIN2Q99541 437 aa12.27□□□□□ -0.45
SRPRA-205ENST00000531104 TRIM9Q9C026 710 aa12.27□□□□□ -0.45
SRPRA-205ENST00000531104 TRIM5Q9C035 493 aa12.27□□□□□ -0.45
SRPRA-205ENST00000531104 RAVER2Q9HCJ3 691 aaKnown RBP12.27□□□□□ -0.45
SRPRA-205ENST00000531104 COL20A1Q9P218 1284 aa12.27□□□□□ -0.45
SRPRA-205ENST00000531104 VAV3Q9UKW4 847 aa12.27□□□□□ -0.45
SRPRA-205ENST00000531104 STK24Q9Y6E0 443 aa12.27□□□□□ -0.45
SRPRA-205ENST00000531104 A0A0G2JMZ2 1700 aa12.26□□□□□ -0.45
SRPRA-205ENST00000531104 ESPNB1AK53 854 aa12.26□□□□□ -0.45
SRPRA-205ENST00000531104 MEIS1O00470 390 aa12.26□□□□□ -0.45
SRPRA-205ENST00000531104 PPP1R12BO60237 982 aaPredicted RBP12.26□□□□□ -0.45
SRPRA-205ENST00000531104 BCRP11274 1271 aa12.26□□□□□ -0.45
SRPRA-205ENST00000531104 IREB2P48200 963 aaKnown RBP12.26□□□□□ -0.45
SRPRA-205ENST00000531104 PLCB2Q00722 1185 aa12.26□□□□□ -0.45
SRPRA-205ENST00000531104 AMPD3Q01432 767 aa12.26□□□□□ -0.45
SRPRA-205ENST00000531104 KMT5BQ4FZB7 885 aa12.26□□□□□ -0.45
SRPRA-205ENST00000531104 NIPA1Q7RTP0 329 aa12.26□□□□□ -0.45
SRPRA-205ENST00000531104 KCNK18Q7Z418 384 aa12.26□□□□□ -0.45
SRPRA-205ENST00000531104 ZSCAN30Q86W11 494 aa12.26□□□□□ -0.45
SRPRA-205ENST00000531104 FAM43AQ8N2R8 423 aa12.26□□□□□ -0.45
SRPRA-205ENST00000531104 RASSF8Q8NHQ8 419 aa12.26□□□□□ -0.45
SRPRA-205ENST00000531104 CYP2W1Q8TAV3 490 aa12.26□□□□□ -0.45
SRPRA-205ENST00000531104 SYTL5Q8TDW5 730 aaPredicted RBP12.26□□□□□ -0.45
SRPRA-205ENST00000531104 SLC5A5Q92911 643 aa12.26□□□□□ -0.45
SRPRA-205ENST00000531104 WNK4Q96J92 1243 aa12.26□□□□□ -0.45
SRPRA-205ENST00000531104 GTPBP4Q9BZE4 634 aaKnown RBP12.26□□□□□ -0.45
SRPRA-205ENST00000531104 NT5C3AQ9H0P0 336 aa12.26□□□□□ -0.45
SRPRA-205ENST00000531104 TAF1DQ9H5J8 278 aaPredicted RBP12.26□□□□□ -0.45
SRPRA-205ENST00000531104 TMOD4Q9NZQ9 345 aa12.26□□□□□ -0.45
SRPRA-205ENST00000531104 PTPRFP10586 1907 aa12.26□□□□□ -0.45
SRPRA-205ENST00000531104 KDM3AQ9Y4C1 1321 aa12.26□□□□□ -0.45
SRPRA-205ENST00000531104 PVALEFA0A1B0GWK0 134 aa12.25□□□□□ -0.45
SRPRA-205ENST00000531104 MYMKA6NI61 221 aa12.25□□□□□ -0.45
SRPRA-205ENST00000531104 MARCH6O60337 910 aa12.25□□□□□ -0.45
SRPRA-205ENST00000531104 PSMD10O75832 226 aa12.25□□□□□ -0.45
SRPRA-205ENST00000531104 TPM3P06753 285 aa12.25□□□□□ -0.45
SRPRA-205ENST00000531104 ALAS1P13196 640 aa12.25□□□□□ -0.45
SRPRA-205ENST00000531104 HOXA7P31268 230 aaPredicted RBP12.25□□□□□ -0.45
SRPRA-205ENST00000531104 FANCCQ00597 558 aa12.25□□□□□ -0.45
SRPRA-205ENST00000531104 PPATQ06203 517 aa12.25□□□□□ -0.45
SRPRA-205ENST00000531104 MCM6Q14566 821 aa12.25□□□□□ -0.45
SRPRA-205ENST00000531104 GPR162Q16538 588 aa12.25□□□□□ -0.45
SRPRA-205ENST00000531104 TKFCQ3LXA3 575 aa12.25□□□□□ -0.45
SRPRA-205ENST00000531104 CEP55Q53EZ4 464 aa12.25□□□□□ -0.45
SRPRA-205ENST00000531104 SPATA1Q5VX52 437 aa12.25□□□□□ -0.45
SRPRA-205ENST00000531104 B3GNT9Q6UX72 402 aa12.25□□□□□ -0.45
SRPRA-205ENST00000531104 SV2BQ7L1I2 683 aa12.25□□□□□ -0.45
SRPRA-205ENST00000531104 ADSSL1Q8N142 457 aa12.25□□□□□ -0.45
SRPRA-205ENST00000531104 KCTD17Q8N5Z5 321 aa12.25□□□□□ -0.45
SRPRA-205ENST00000531104 GIMAP8Q8ND71 665 aaPredicted RBP12.25□□□□□ -0.45
SRPRA-205ENST00000531104 LARP4BQ92615 738 aaKnown RBP12.25□□□□□ -0.45
SRPRA-205ENST00000531104 FANCLQ9NW38 375 aa12.25□□□□□ -0.45
SRPRA-205ENST00000531104 ZNF214Q9UL59 606 aaPredicted RBP12.25□□□□□ -0.45
SRPRA-205ENST00000531104 ZKSCAN5Q9Y2L8 839 aa12.25□□□□□ -0.45
SRPRA-205ENST00000531104 UBIAD1Q9Y5Z9 338 aa12.25□□□□□ -0.45
SRPRA-205ENST00000531104 COL11A1P12107 1806 aaPredicted RBP12.25□□□□□ -0.45
SRPRA-205ENST00000531104 IQCA1LA6NCM1 817 aa12.24□□□□□ -0.45
SRPRA-205ENST00000531104 SPDYE5A6NIY4 337 aa12.24□□□□□ -0.45
SRPRA-205ENST00000531104 SPDYE16A6NNV3 312 aaPredicted RBP12.24□□□□□ -0.45
SRPRA-205ENST00000531104 CXCL11O14625 94 aa12.24□□□□□ -0.45
SRPRA-205ENST00000531104 MED24O75448 989 aa12.24□□□□□ -0.45
SRPRA-205ENST00000531104 SPATA31C1P0DKV0 1188 aa12.24□□□□□ -0.45
SRPRA-205ENST00000531104 ATP1A3P13637 1013 aa12.24□□□□□ -0.45
SRPRA-205ENST00000531104 RPA1P27694 616 aa12.24□□□□□ -0.45
SRPRA-205ENST00000531104 ZNF76P36508 570 aa12.24□□□□□ -0.45
SRPRA-205ENST00000531104 CCT6AP40227 531 aaKnown RBP12.24□□□□□ -0.45
SRPRA-205ENST00000531104 STAT3P40763 770 aa12.24□□□□□ -0.45
SRPRA-205ENST00000531104 SETQ01105 290 aaPredicted RBP12.24□□□□□ -0.45
SRPRA-205ENST00000531104 EHHADHQ08426 723 aa12.24□□□□□ -0.45
SRPRA-205ENST00000531104 PPP2R5CQ13362 524 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms