RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 PSMB7Q99436 277 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 CCDC8Q9H0W5 538 aaPredicted RBP7.86□□□□□ -1.15
CTNND1-229ENST00000531014 VPS16Q9H269 839 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 TTLL3Q9Y4R7 772 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 SPDYE16A6NNV3 312 aaPredicted RBP7.86□□□□□ -1.15
CTNND1-229ENST00000531014 H0Y626 953 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 C21orf2O43822 256 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 ADCY3O60266 1144 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 C1QTNF8P60827 252 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 SPDYE2Q495Y8 402 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 ATL3Q6DD88 541 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 LRRC8BQ6P9F7 803 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 EP400NLQ6ZTU2 488 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 BRAPQ7Z569 592 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 LUZP2Q86TE4 346 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 RRAGDQ9NQL2 400 aaPredicted RBP7.86□□□□□ -1.15
CTNND1-229ENST00000531014 STOML1Q9UBI4 398 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 RASGRF2O14827 1237 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 IFNB1P01574 187 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 CALM1P0DP23 149 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 CALM2P0DP24 149 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 CALM3P0DP25 149 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 RPS12P25398 132 aaKnown RBP7.86□□□□□ -1.15
CTNND1-229ENST00000531014 HDAC1Q13547 482 aaPredicted RBP7.86□□□□□ -1.15
CTNND1-229ENST00000531014 PRKG1Q13976 671 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 DTHD1Q6ZMT9 781 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 TRIM58Q8NG06 486 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 EYA1Q99502 592 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 TRAIPQ9BWF2 469 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 CNNM2Q9H8M5 875 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 ZFYVE28Q9HCC9 887 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 LAMC1P11047 1609 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 MAGEA9P43362 315 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 DEFA1P59665 94 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 DEFA3P59666 94 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 CUL3Q13618 768 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 HIF1AQ16665 826 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 TJAP1Q5JTD0 557 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 SV2BQ7L1I2 683 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 FCHSD1Q86WN1 690 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 SYNE4Q8N205 404 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 COA7Q96BR5 231 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 HYOU1Q9Y4L1 999 aa7.86□□□□□ -1.15
CTNND1-229ENST00000531014 TMEM88BA6NKF7 163 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 TNNC2P02585 160 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 ESRRAP11474 423 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-229ENST00000531014 HSPA6P17066 643 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 HAND2P61296 217 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 FANCCQ00597 558 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 IQCB1Q15051 598 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 BEND3Q5T5X7 828 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 ARHGEF18Q6ZSZ5 1173 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 RNF217Q8TC41 542 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 ASCC2Q9H1I8 757 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-229ENST00000531014 COG4Q9H9E3 785 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 STX8Q9UNK0 236 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 CTNND2Q9UQB3 1225 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 BZW2Q9Y6E2 419 aaKnown RBP7.85□□□□□ -1.15
CTNND1-229ENST00000531014 POLR1AO95602 1720 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-229ENST00000531014 KRIT1O00522 736 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 MMEP08473 750 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 OCM2P0CE71 109 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 OCMP0CE72 109 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-229ENST00000531014 DPEP1P16444 411 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 IFNAR2P48551 515 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 ZNF75DP51815 510 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 KLHL30Q0D2K2 578 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 APOBRQ0VD83 1088 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 EIF4A2Q14240 407 aaKnown RBP7.85□□□□□ -1.15
CTNND1-229ENST00000531014 IFIT1BQ5T764 474 aaKnown RBP7.85□□□□□ -1.15
CTNND1-229ENST00000531014 CNNM4Q6P4Q7 775 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 KRT26Q7Z3Y9 468 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 PATL1Q86TB9 770 aaKnown RBP7.85□□□□□ -1.15
CTNND1-229ENST00000531014 DCLK2Q8N568 766 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 ESR2Q92731 530 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 THAP11Q96EK4 314 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 PGBD1Q96JS3 809 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 PDE11AQ9HCR9 933 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 C6orf203Q9P0P8 240 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-229ENST00000531014 IPO11Q9UI26 975 aaKnown RBP7.85□□□□□ -1.15
CTNND1-229ENST00000531014 PNMA2Q9UL42 364 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 SPDYE3A6NKU9 549 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 EIF3CLB5ME19 914 aaKnown RBP7.85□□□□□ -1.15
CTNND1-229ENST00000531014 CALUO43852 315 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-229ENST00000531014 ORC4O43929 436 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 HUNKP57058 714 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 PLS1Q14651 629 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 SLC9A5Q14940 896 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 MCUQ8NE86 351 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 SNX29Q8TEQ0 813 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 CYTH2Q99418 400 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 CCDC90BQ9GZT6 254 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 VPS33BQ9H267 617 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 ITM2BQ9Y287 266 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 IRS4O14654 1257 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-229ENST00000531014 INHBAP08476 426 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 ZNF790Q6PG37 636 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 GSDMAQ96QA5 445 aa7.85□□□□□ -1.15
CTNND1-229ENST00000531014 RIOK1Q9BRS2 568 aaKnown RBP7.85□□□□□ -1.15
CTNND1-229ENST00000531014 RAD21L1Q9H4I0 556 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms